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org.eclipse.jgit.dircache.DirCacheCheckout Maven / Gradle / Ivy

/*
 * Copyright (C) 2007, Dave Watson 
 * Copyright (C) 2008, Robin Rosenberg 
 * Copyright (C) 2008, Roger C. Soares 
 * Copyright (C) 2006, Shawn O. Pearce 
 * Copyright (C) 2010, Chrisian Halstrick  and
 * other copyright owners as documented in the project's IP log.
 *
 * This program and the accompanying materials are made available under the
 * terms of the Eclipse Distribution License v1.0 which accompanies this
 * distribution, is reproduced below, and is available at
 * http://www.eclipse.org/org/documents/edl-v10.php
 *
 * All rights reserved.
 *
 * Redistribution and use in source and binary forms, with or without
 * modification, are permitted provided that the following conditions are met:
 *
 * - Redistributions of source code must retain the above copyright notice, this
 * list of conditions and the following disclaimer.
 *
 * - Redistributions in binary form must reproduce the above copyright notice,
 * this list of conditions and the following disclaimer in the documentation
 * and/or other materials provided with the distribution.
 *
 * - Neither the name of the Eclipse Foundation, Inc. nor the names of its
 * contributors may be used to endorse or promote products derived from this
 * software without specific prior written permission.
 *
 * THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
 * AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
 * IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
 * ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE
 * LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
 * CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
 * SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
 * INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
 * CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
 * ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
 * POSSIBILITY OF SUCH DAMAGE.
 */

package org.eclipse.jgit.dircache;

import java.io.File;
import java.io.FileOutputStream;
import java.io.IOException;
import java.io.OutputStream;
import java.text.MessageFormat;
import java.util.ArrayList;
import java.util.HashMap;
import java.util.List;
import java.util.Map;

import org.eclipse.jgit.errors.CheckoutConflictException;
import org.eclipse.jgit.errors.CorruptObjectException;
import org.eclipse.jgit.errors.IncorrectObjectTypeException;
import org.eclipse.jgit.errors.IndexWriteException;
import org.eclipse.jgit.errors.MissingObjectException;
import org.eclipse.jgit.internal.JGitText;
import org.eclipse.jgit.lib.Constants;
import org.eclipse.jgit.lib.CoreConfig.AutoCRLF;
import org.eclipse.jgit.lib.CoreConfig.SymLinks;
import org.eclipse.jgit.lib.FileMode;
import org.eclipse.jgit.lib.ObjectChecker;
import org.eclipse.jgit.lib.ObjectId;
import org.eclipse.jgit.lib.ObjectLoader;
import org.eclipse.jgit.lib.ObjectReader;
import org.eclipse.jgit.lib.Repository;
import org.eclipse.jgit.treewalk.AbstractTreeIterator;
import org.eclipse.jgit.treewalk.CanonicalTreeParser;
import org.eclipse.jgit.treewalk.EmptyTreeIterator;
import org.eclipse.jgit.treewalk.FileTreeIterator;
import org.eclipse.jgit.treewalk.NameConflictTreeWalk;
import org.eclipse.jgit.treewalk.TreeWalk;
import org.eclipse.jgit.treewalk.WorkingTreeIterator;
import org.eclipse.jgit.treewalk.WorkingTreeOptions;
import org.eclipse.jgit.treewalk.filter.PathFilter;
import org.eclipse.jgit.util.FS;
import org.eclipse.jgit.util.FileUtils;
import org.eclipse.jgit.util.RawParseUtils;
import org.eclipse.jgit.util.SystemReader;
import org.eclipse.jgit.util.io.AutoCRLFOutputStream;

/**
 * This class handles checking out one or two trees merging with the index.
 */
public class DirCacheCheckout {
	private Repository repo;

	private HashMap updated = new HashMap();

	private ArrayList conflicts = new ArrayList();

	private ArrayList removed = new ArrayList();

	private ObjectId mergeCommitTree;

	private DirCache dc;

	private DirCacheBuilder builder;

	private NameConflictTreeWalk walk;

	private ObjectId headCommitTree;

	private WorkingTreeIterator workingTree;

	private boolean failOnConflict = true;

	private ArrayList toBeDeleted = new ArrayList();

	/**
	 * @return a list of updated paths and objectIds
	 */
	public Map getUpdated() {
		return updated;
	}

	/**
	 * @return a list of conflicts created by this checkout
	 */
	public List getConflicts() {
		return conflicts;
	}

	/**
	 * @return a list of paths (relative to the start of the working tree) of
	 *         files which couldn't be deleted during last call to
	 *         {@link #checkout()} . {@link #checkout()} detected that these
	 *         files should be deleted but the deletion in the filesystem failed
	 *         (e.g. because a file was locked). To have a consistent state of
	 *         the working tree these files have to be deleted by the callers of
	 *         {@link DirCacheCheckout}.
	 */
	public List getToBeDeleted() {
		return toBeDeleted;
	}

	/**
	 * @return a list of all files removed by this checkout
	 */
	public List getRemoved() {
		return removed;
	}

	/**
	 * Constructs a DirCacheCeckout for merging and checking out two trees (HEAD
	 * and mergeCommitTree) and the index.
	 *
	 * @param repo
	 *            the repository in which we do the checkout
	 * @param headCommitTree
	 *            the id of the tree of the head commit
	 * @param dc
	 *            the (already locked) Dircache for this repo
	 * @param mergeCommitTree
	 *            the id of the tree we want to fast-forward to
	 * @param workingTree
	 *            an iterator over the repositories Working Tree
	 * @throws IOException
	 */
	public DirCacheCheckout(Repository repo, ObjectId headCommitTree, DirCache dc,
			ObjectId mergeCommitTree, WorkingTreeIterator workingTree)
			throws IOException {
		this.repo = repo;
		this.dc = dc;
		this.headCommitTree = headCommitTree;
		this.mergeCommitTree = mergeCommitTree;
		this.workingTree = workingTree;
	}

	/**
	 * Constructs a DirCacheCeckout for merging and checking out two trees (HEAD
	 * and mergeCommitTree) and the index. As iterator over the working tree
	 * this constructor creates a standard {@link FileTreeIterator}
	 *
	 * @param repo
	 *            the repository in which we do the checkout
	 * @param headCommitTree
	 *            the id of the tree of the head commit
	 * @param dc
	 *            the (already locked) Dircache for this repo
	 * @param mergeCommitTree
	 *            the id of the tree we want to fast-forward to
	 * @throws IOException
	 */
	public DirCacheCheckout(Repository repo, ObjectId headCommitTree,
			DirCache dc, ObjectId mergeCommitTree) throws IOException {
		this(repo, headCommitTree, dc, mergeCommitTree, new FileTreeIterator(repo));
	}

	/**
	 * Constructs a DirCacheCeckout for checking out one tree, merging with the
	 * index.
	 *
	 * @param repo
	 *            the repository in which we do the checkout
	 * @param dc
	 *            the (already locked) Dircache for this repo
	 * @param mergeCommitTree
	 *            the id of the tree we want to fast-forward to
	 * @param workingTree
	 *            an iterator over the repositories Working Tree
	 * @throws IOException
	 */
	public DirCacheCheckout(Repository repo, DirCache dc,
			ObjectId mergeCommitTree, WorkingTreeIterator workingTree)
			throws IOException {
		this(repo, null, dc, mergeCommitTree, workingTree);
	}

	/**
	 * Constructs a DirCacheCeckout for checking out one tree, merging with the
	 * index. As iterator over the working tree this constructor creates a
	 * standard {@link FileTreeIterator}
	 *
	 * @param repo
	 *            the repository in which we do the checkout
	 * @param dc
	 *            the (already locked) Dircache for this repo
	 * @param mergeCommitTree
	 *            the id of the tree of the
	 * @throws IOException
	 */
	public DirCacheCheckout(Repository repo, DirCache dc,
			ObjectId mergeCommitTree) throws IOException {
		this(repo, null, dc, mergeCommitTree, new FileTreeIterator(repo));
	}

	/**
	 * Scan head, index and merge tree. Used during normal checkout or merge
	 * operations.
	 *
	 * @throws CorruptObjectException
	 * @throws IOException
	 */
	public void preScanTwoTrees() throws CorruptObjectException, IOException {
		removed.clear();
		updated.clear();
		conflicts.clear();
		walk = new NameConflictTreeWalk(repo);
		builder = dc.builder();

		addTree(walk, headCommitTree);
		addTree(walk, mergeCommitTree);
		walk.addTree(new DirCacheBuildIterator(builder));
		walk.addTree(workingTree);

		while (walk.next()) {
			processEntry(walk.getTree(0, CanonicalTreeParser.class),
					walk.getTree(1, CanonicalTreeParser.class),
					walk.getTree(2, DirCacheBuildIterator.class),
					walk.getTree(3, WorkingTreeIterator.class));
			if (walk.isSubtree())
				walk.enterSubtree();
		}
	}

	private void addTree(TreeWalk tw, ObjectId id) throws MissingObjectException, IncorrectObjectTypeException, IOException {
		if (id == null)
			tw.addTree(new EmptyTreeIterator());
		else
			tw.addTree(id);
	}

	/**
	 * Scan index and merge tree (no HEAD). Used e.g. for initial checkout when
	 * there is no head yet.
	 *
	 * @throws MissingObjectException
	 * @throws IncorrectObjectTypeException
	 * @throws CorruptObjectException
	 * @throws IOException
	 */
	public void prescanOneTree()
			throws MissingObjectException, IncorrectObjectTypeException,
			CorruptObjectException, IOException {
		removed.clear();
		updated.clear();
		conflicts.clear();

		builder = dc.builder();

		walk = new NameConflictTreeWalk(repo);
		addTree(walk, mergeCommitTree);
		walk.addTree(new DirCacheBuildIterator(builder));
		walk.addTree(workingTree);

		while (walk.next()) {
			processEntry(walk.getTree(0, CanonicalTreeParser.class),
					walk.getTree(1, DirCacheBuildIterator.class),
					walk.getTree(2, WorkingTreeIterator.class));
			if (walk.isSubtree())
				walk.enterSubtree();
		}
		conflicts.removeAll(removed);
	}

	/**
	 * Processing an entry in the context of {@link #prescanOneTree()} when only
	 * one tree is given
	 *
	 * @param m the tree to merge
	 * @param i the index
	 * @param f the working tree
	 * @throws IOException
	 */
	void processEntry(CanonicalTreeParser m, DirCacheBuildIterator i,
			WorkingTreeIterator f) throws IOException {
		if (m != null) {
			checkValidPath(m);
			// There is an entry in the merge commit. Means: we want to update
			// what's currently in the index and working-tree to that one
			if (i == null) {
				// The index entry is missing
				if (f != null && !FileMode.TREE.equals(f.getEntryFileMode())
						&& !f.isEntryIgnored()) {
					// don't overwrite an untracked and not ignored file
					conflicts.add(walk.getPathString());
				} else
					update(m.getEntryPathString(), m.getEntryObjectId(),
						m.getEntryFileMode());
			} else if (f == null || !m.idEqual(i)) {
				// The working tree file is missing or the merge content differs
				// from index content
				update(m.getEntryPathString(), m.getEntryObjectId(),
						m.getEntryFileMode());
			} else if (i.getDirCacheEntry() != null) {
				// The index contains a file (and not a folder)
				if (f.isModified(i.getDirCacheEntry(), true,
						this.walk.getObjectReader())
						|| i.getDirCacheEntry().getStage() != 0)
					// The working tree file is dirty or the index contains a
					// conflict
					update(m.getEntryPathString(), m.getEntryObjectId(),
							m.getEntryFileMode());
				else {
					// update the timestamp of the index with the one from the
					// file if not set, as we are sure to be in sync here.
					DirCacheEntry entry = i.getDirCacheEntry();
					if (entry.getLastModified() == 0)
						entry.setLastModified(f.getEntryLastModified());
					keep(entry);
				}
			} else
				// The index contains a folder
				keep(i.getDirCacheEntry());
		} else {
			// There is no entry in the merge commit. Means: we want to delete
			// what's currently in the index and working tree
			if (f != null) {
				// There is a file/folder for that path in the working tree
				if (walk.isDirectoryFileConflict()) {
					conflicts.add(walk.getPathString());
				} else {
					// No file/folder conflict exists. All entries are files or
					// all entries are folders
					if (i != null) {
						// ... and the working tree contained a file or folder
						// -> add it to the removed set and remove it from
						// conflicts set
						remove(i.getEntryPathString());
						conflicts.remove(i.getEntryPathString());
					} else {
						// untracked file, neither contained in tree to merge
						// nor in index
					}
				}
			} else {
				// There is no file/folder for that path in the working tree,
				// nor in the merge head.
				// The only entry we have is the index entry. Like the case
				// where there is a file with the same name, remove it,
			}
		}
	}

	/**
	 * Execute this checkout
	 *
	 * @return false if this method could not delete all the files
	 *         which should be deleted (e.g. because of of the files was
	 *         locked). In this case {@link #getToBeDeleted()} lists the files
	 *         which should be tried to be deleted outside of this method.
	 *         Although false is returned the checkout was
	 *         successful and the working tree was updated for all other files.
	 *         true is returned when no such problem occurred
	 *
	 * @throws IOException
	 */
	public boolean checkout() throws IOException {
		try {
			return doCheckout();
		} finally {
			dc.unlock();
		}
	}

	private boolean doCheckout() throws CorruptObjectException, IOException,
			MissingObjectException, IncorrectObjectTypeException,
			CheckoutConflictException, IndexWriteException {
		toBeDeleted.clear();
		ObjectReader objectReader = repo.getObjectDatabase().newReader();
		try {
			if (headCommitTree != null)
				preScanTwoTrees();
			else
				prescanOneTree();

			if (!conflicts.isEmpty()) {
				if (failOnConflict)
					throw new CheckoutConflictException(conflicts.toArray(new String[conflicts.size()]));
				else
					cleanUpConflicts();
			}

			// update our index
			builder.finish();

			File file = null;
			String last = null;
			// when deleting files process them in the opposite order as they have
			// been reported. This ensures the files are deleted before we delete
			// their parent folders
			for (int i = removed.size() - 1; i >= 0; i--) {
				String r = removed.get(i);
				file = new File(repo.getWorkTree(), r);
				if (!file.delete() && repo.getFS().exists(file)) {
					// The list of stuff to delete comes from the index
					// which will only contain a directory if it is
					// a submodule, in which case we shall not attempt
					// to delete it. A submodule is not empty, so it
					// is safe to check this after a failed delete.
					if (!repo.getFS().isDirectory(file))
						toBeDeleted.add(r);
				} else {
					if (last != null && !isSamePrefix(r, last))
						removeEmptyParents(new File(repo.getWorkTree(), last));
					last = r;
				}
			}
			if (file != null)
				removeEmptyParents(file);

			for (String path : updated.keySet()) {
				// ... create/overwrite this file ...
				file = new File(repo.getWorkTree(), path);
				if (!file.getParentFile().mkdirs()) {
					// ignore
				}

				DirCacheEntry entry = dc.getEntry(path);

				// submodules are handled with separate operations
				if (FileMode.GITLINK.equals(entry.getRawMode()))
					continue;

				checkoutEntry(repo, file, entry, objectReader);
			}

			// commit the index builder - a new index is persisted
			if (!builder.commit())
				throw new IndexWriteException();
		} finally {
			objectReader.release();
		}
		return toBeDeleted.size() == 0;
	}

	private static boolean isSamePrefix(String a, String b) {
		int as = a.lastIndexOf('/');
		int bs = b.lastIndexOf('/');
		return a.substring(0, as + 1).equals(b.substring(0, bs + 1));
	}

	 private void removeEmptyParents(File f) {
		File parentFile = f.getParentFile();

		while (parentFile != null && !parentFile.equals(repo.getWorkTree())) {
			if (!parentFile.delete())
				break;
			parentFile = parentFile.getParentFile();
		}
	}

	/**
	 * Compares whether two pairs of ObjectId and FileMode are equal.
	 *
	 * @param id1
	 * @param mode1
	 * @param id2
	 * @param mode2
	 * @return true if FileModes and ObjectIds are equal.
	 *         false otherwise
	 */
	private boolean equalIdAndMode(ObjectId id1, FileMode mode1, ObjectId id2,
			FileMode mode2) {
		if (!mode1.equals(mode2))
			return false;
		return id1 != null ? id1.equals(id2) : id2 == null;
	}

	/**
	 * Here the main work is done. This method is called for each existing path
	 * in head, index and merge. This method decides what to do with the
	 * corresponding index entry: keep it, update it, remove it or mark a
	 * conflict.
	 *
	 * @param h
	 *            the entry for the head
	 * @param m
	 *            the entry for the merge
	 * @param i
	 *            the entry for the index
	 * @param f
	 *            the file in the working tree
	 * @throws IOException
	 */

	void processEntry(CanonicalTreeParser h, CanonicalTreeParser m,
			DirCacheBuildIterator i, WorkingTreeIterator f) throws IOException {
		DirCacheEntry dce = i != null ? i.getDirCacheEntry() : null;

		String name = walk.getPathString();

		if (m != null)
			checkValidPath(m);

		if (i == null && m == null && h == null) {
			// File/Directory conflict case #20
			if (walk.isDirectoryFileConflict())
				// TODO: check whether it is always correct to report a conflict here
				conflict(name, null, null, null);

			// file only exists in working tree -> ignore it
			return;
		}

		ObjectId iId = (i == null ? null : i.getEntryObjectId());
		ObjectId mId = (m == null ? null : m.getEntryObjectId());
		ObjectId hId = (h == null ? null : h.getEntryObjectId());
		FileMode iMode = (i == null ? null : i.getEntryFileMode());
		FileMode mMode = (m == null ? null : m.getEntryFileMode());
		FileMode hMode = (h == null ? null : h.getEntryFileMode());

		/**
		 * 
		 *  File/Directory conflicts:
		 *  the following table from ReadTreeTest tells what to do in case of directory/file
		 *  conflicts. I give comments here
		 *
		 *      H        I       M     Clean     H==M     H==I    I==M         Result
		 *      ------------------------------------------------------------------
		 * 1    D        D       F       Y         N       Y       N           Update
		 * 2    D        D       F       N         N       Y       N           Conflict
		 * 3    D        F       D                 Y       N       N           Keep
		 * 4    D        F       D                 N       N       N           Conflict
		 * 5    D        F       F       Y         N       N       Y           Keep
		 * 5b   D        F       F       Y         N       N       N           Conflict
		 * 6    D        F       F       N         N       N       Y           Keep
		 * 6b   D        F       F       N         N       N       N           Conflict
		 * 7    F        D       F       Y         Y       N       N           Update
		 * 8    F        D       F       N         Y       N       N           Conflict
		 * 9    F        D       F                 N       N       N           Conflict
		 * 10   F        D       D                 N       N       Y           Keep
		 * 11   F        D       D                 N       N       N           Conflict
		 * 12   F        F       D       Y         N       Y       N           Update
		 * 13   F        F       D       N         N       Y       N           Conflict
		 * 14   F        F       D                 N       N       N           Conflict
		 * 15   0        F       D                 N       N       N           Conflict
		 * 16   0        D       F       Y         N       N       N           Update
		 * 17   0        D       F                 N       N       N           Conflict
		 * 18   F        0       D                                             Update
		 * 19   D        0       F                                             Update
		 * 20   0        0       F       N (worktree=dir)                      Conflict
		 * 
*/ // The information whether head,index,merge iterators are currently // pointing to file/folder/non-existing is encoded into this variable. // // To decode write down ffMask in hexadecimal form. The last digit // represents the state for the merge iterator, the second last the // state for the index iterator and the third last represents the state // for the head iterator. The hexadecimal constant "F" stands for // "file", a "D" stands for "directory" (tree), and a "0" stands for // non-existing. Symbolic links and git links are treated as File here. // // Examples: // ffMask == 0xFFD -> Head=File, Index=File, Merge=Tree // ffMask == 0xDD0 -> Head=Tree, Index=Tree, Merge=Non-Existing int ffMask = 0; if (h != null) ffMask = FileMode.TREE.equals(hMode) ? 0xD00 : 0xF00; if (i != null) ffMask |= FileMode.TREE.equals(iMode) ? 0x0D0 : 0x0F0; if (m != null) ffMask |= FileMode.TREE.equals(mMode) ? 0x00D : 0x00F; // Check whether we have a possible file/folder conflict. Therefore we // need a least one file and one folder. if (((ffMask & 0x222) != 0x000) && (((ffMask & 0x00F) == 0x00D) || ((ffMask & 0x0F0) == 0x0D0) || ((ffMask & 0xF00) == 0xD00))) { // There are 3*3*3=27 possible combinations of file/folder // conflicts. Some of them are not-relevant because // they represent no conflict, e.g. 0xFFF, 0xDDD, ... The following // switch processes all relevant cases. switch (ffMask) { case 0xDDF: // 1 2 if (f != null && isModifiedSubtree_IndexWorkingtree(name)) { conflict(name, dce, h, m); // 1 } else { update(name, mId, mMode); // 2 } break; case 0xDFD: // 3 4 keep(dce); break; case 0xF0D: // 18 remove(name); break; case 0xDFF: // 5 5b 6 6b if (equalIdAndMode(iId, iMode, mId, mMode)) keep(dce); // 5 6 else conflict(name, dce, h, m); // 5b 6b break; case 0xFDD: // 10 11 // TODO: make use of tree extension as soon as available in jgit // we would like to do something like // if (!equalIdAndMode(iId, iMode, mId, mMode) // conflict(name, i.getDirCacheEntry(), h, m); // But since we don't know the id of a tree in the index we do // nothing here and wait that conflicts between index and merge // are found later break; case 0xD0F: // 19 update(name, mId, mMode); break; case 0xDF0: // conflict without a rule case 0x0FD: // 15 conflict(name, dce, h, m); break; case 0xFDF: // 7 8 9 if (equalIdAndMode(hId, hMode, mId, mMode)) { if (isModifiedSubtree_IndexWorkingtree(name)) conflict(name, dce, h, m); // 8 else update(name, mId, mMode); // 7 } else conflict(name, dce, h, m); // 9 break; case 0xFD0: // keep without a rule keep(dce); break; case 0xFFD: // 12 13 14 if (equalIdAndMode(hId, hMode, iId, iMode)) if (f != null && f.isModified(dce, true, this.walk.getObjectReader())) conflict(name, dce, h, m); // 13 else remove(name); // 12 else conflict(name, dce, h, m); // 14 break; case 0x0DF: // 16 17 if (!isModifiedSubtree_IndexWorkingtree(name)) update(name, mId, mMode); else conflict(name, dce, h, m); break; default: keep(dce); } return; } // if we have no file at all then there is nothing to do if ((ffMask & 0x222) == 0 && (f == null || FileMode.TREE.equals(f.getEntryFileMode()))) return; if ((ffMask == 0x00F) && f != null && FileMode.TREE.equals(f.getEntryFileMode())) { // File/Directory conflict case #20 conflict(name, null, h, m); return; } if (i == null) { // Nothing in Index // At least one of Head, Index, Merge is not empty // make sure not to overwrite untracked files if (f != null) { // A submodule is not a file. We should ignore it if (!FileMode.GITLINK.equals(mMode)) { // a dirty worktree: the index is empty but we have a // workingtree-file if (mId == null || !equalIdAndMode(mId, mMode, f.getEntryObjectId(), f.getEntryFileMode())) { conflict(name, null, h, m); return; } } } /** *
			 * 	          I (index)     H        M     H==M  Result
			 * 	        -------------------------------------------
			 * 	        0 nothing    nothing  nothing        (does not happen)
			 * 	        1 nothing    nothing  exists         use M
			 * 	        2 nothing    exists   nothing        remove path from index
			 * 	        3 nothing    exists   exists   yes   keep index
			 * 	          nothing    exists   exists   no    fail
			 * 
*/ if (h == null) // Nothing in Head // Nothing in Index // At least one of Head, Index, Merge is not empty // -> only Merge contains something for this path. Use it! // Potentially update the file update(name, mId, mMode); // 1 else if (m == null) // Nothing in Merge // Something in Head // Nothing in Index // -> only Head contains something for this path and it should // be deleted. Potentially removes the file! remove(name); // 2 else { // 3 // Something in Merge // Something in Head // Nothing in Index // -> Head and Merge contain something (maybe not the same) and // in the index there is nothing (e.g. 'git rm ...' was // called before). Ignore the cached deletion and use what we // find in Merge. Potentially updates the file. if (equalIdAndMode(hId, hMode, mId, mMode)) keep(dce); else conflict(name, dce, h, m); } } else { // Something in Index if (h == null) { // Nothing in Head // Something in Index /** *
				 * 	          clean I==H  I==M       H        M        Result
				 * 	         -----------------------------------------------------
				 * 	        4 yes   N/A   N/A     nothing  nothing  keep index
				 * 	        5 no    N/A   N/A     nothing  nothing  keep index
				 *
				 * 	        6 yes   N/A   yes     nothing  exists   keep index
				 * 	        7 no    N/A   yes     nothing  exists   keep index
				 * 	        8 yes   N/A   no      nothing  exists   fail
				 * 	        9 no    N/A   no      nothing  exists   fail
				 * 
*/ if (m == null || !isModified_IndexTree(name, iId, iMode, mId, mMode, mergeCommitTree)) { // Merge contains nothing or the same as Index // Nothing in Head // Something in Index if (m==null && walk.isDirectoryFileConflict()) { // Nothing in Merge and current path is part of // File/Folder conflict // Nothing in Head // Something in Index if (dce != null && (f == null || f.isModified(dce, true, this.walk.getObjectReader()))) // No file or file is dirty // Nothing in Merge and current path is part of // File/Folder conflict // Nothing in Head // Something in Index // -> File folder conflict and Merge wants this // path to be removed. Since the file is dirty // report a conflict conflict(name, dce, h, m); else // A file is present and file is not dirty // Nothing in Merge and current path is part of // File/Folder conflict // Nothing in Head // Something in Index // -> File folder conflict and Merge wants this path // to be removed. Since the file is not dirty remove // file and index entry remove(name); } else // Something in Merge or current path is not part of // File/Folder conflict // Merge contains nothing or the same as Index // Nothing in Head // Something in Index // -> Merge contains nothing new. Keep the index. keep(dce); } else // Merge contains something and it is not the same as Index // Nothing in Head // Something in Index // -> Index contains something new (different from Head) // and Merge is different from Index. Report a conflict conflict(name, dce, h, m); } else if (m == null) { // Nothing in Merge // Something in Head // Something in Index /** *
				 * 	           clean I==H  I==M       H        M        Result
				 * 	         -----------------------------------------------------
				 * 	        10 yes   yes   N/A     exists   nothing  remove path from index
				 * 	        11 no    yes   N/A     exists   nothing  keep file
				 * 	        12 yes   no    N/A     exists   nothing  fail
				 * 	        13 no    no    N/A     exists   nothing  fail
				 * 
*/ if (iMode == FileMode.GITLINK) { // A submodule in Index // Nothing in Merge // Something in Head // Submodules that disappear from the checkout must // be removed from the index, but not deleted from disk. remove(name); } else { // Something different from a submodule in Index // Nothing in Merge // Something in Head if (!isModified_IndexTree(name, iId, iMode, hId, hMode, headCommitTree)) { // Index contains the same as Head // Something different from a submodule in Index // Nothing in Merge // Something in Head if (f != null && f.isModified(dce, true, this.walk.getObjectReader())) { // file is dirty // Index contains the same as Head // Something different from a submodule in Index // Nothing in Merge // Something in Head if (!FileMode.TREE.equals(f.getEntryFileMode()) && FileMode.TREE.equals(iMode)) // The workingtree contains a file and the index semantically contains a folder. // Git considers the workingtree file as untracked. Just keep the untracked file. return; else // -> file is dirty and tracked but is should be // removed. That's a conflict conflict(name, dce, h, m); } else // file doesn't exist or is clean // Index contains the same as Head // Something different from a submodule in Index // Nothing in Merge // Something in Head // -> Remove from index and delete the file remove(name); } else // Index contains something different from Head // Something different from a submodule in Index // Nothing in Merge // Something in Head // -> Something new is in index (and maybe even on the // filesystem). But Merge wants the path to be removed. // Report a conflict conflict(name, dce, h, m); } } else { // Something in Merge // Something in Head // Something in Index if (!equalIdAndMode(hId, hMode, mId, mMode) && isModified_IndexTree(name, iId, iMode, hId, hMode, headCommitTree) && isModified_IndexTree(name, iId, iMode, mId, mMode, mergeCommitTree)) // All three contents in Head, Merge, Index differ from each // other // -> All contents differ. Report a conflict. conflict(name, dce, h, m); else // At least two of the contents of Head, Index, Merge // are the same // Something in Merge // Something in Head // Something in Index if (!isModified_IndexTree(name, iId, iMode, hId, hMode, headCommitTree) && isModified_IndexTree(name, iId, iMode, mId, mMode, mergeCommitTree)) { // Head contains the same as Index. Merge differs // Something in Merge // For submodules just update the index with the new SHA-1 if (dce != null && FileMode.GITLINK.equals(dce.getFileMode())) { // Index and Head contain the same submodule. Merge // differs // Something in Merge // -> Nothing new in index. Move to merge. // Potentially updates the file // TODO check that we don't overwrite some unsaved // file content update(name, mId, mMode); } else if (dce != null && (f != null && f.isModified(dce, true, this.walk.getObjectReader()))) { // File exists and is dirty // Head and Index don't contain a submodule // Head contains the same as Index. Merge differs // Something in Merge // -> Merge wants the index and file to be updated // but the file is dirty. Report a conflict conflict(name, dce, h, m); } else { // File doesn't exist or is clean // Head and Index don't contain a submodule // Head contains the same as Index. Merge differs // Something in Merge // -> Standard case when switching between branches: // Nothing new in index but something different in // Merge. Update index and file update(name, mId, mMode); } } else { // Head differs from index or merge is same as index // At least two of the contents of Head, Index, Merge // are the same // Something in Merge // Something in Head // Something in Index // Can be formulated as: Either all three states are // equal or Merge is equal to Head or Index and differs // to the other one. // -> In all three cases we don't touch index and file. keep(dce); } } } } /** * A conflict is detected - add the three different stages to the index * @param path the path of the conflicting entry * @param e the previous index entry * @param h the first tree you want to merge (the HEAD) * @param m the second tree you want to merge */ private void conflict(String path, DirCacheEntry e, AbstractTreeIterator h, AbstractTreeIterator m) { conflicts.add(path); DirCacheEntry entry; if (e != null) { entry = new DirCacheEntry(e.getPathString(), DirCacheEntry.STAGE_1); entry.copyMetaData(e, true); builder.add(entry); } if (h != null && !FileMode.TREE.equals(h.getEntryFileMode())) { entry = new DirCacheEntry(h.getEntryPathString(), DirCacheEntry.STAGE_2); entry.setFileMode(h.getEntryFileMode()); entry.setObjectId(h.getEntryObjectId()); builder.add(entry); } if (m != null && !FileMode.TREE.equals(m.getEntryFileMode())) { entry = new DirCacheEntry(m.getEntryPathString(), DirCacheEntry.STAGE_3); entry.setFileMode(m.getEntryFileMode()); entry.setObjectId(m.getEntryObjectId()); builder.add(entry); } } private void keep(DirCacheEntry e) { if (e != null && !FileMode.TREE.equals(e.getFileMode())) builder.add(e); } private void remove(String path) { removed.add(path); } private void update(String path, ObjectId mId, FileMode mode) { if (!FileMode.TREE.equals(mode)) { updated.put(path, mId); DirCacheEntry entry = new DirCacheEntry(path, DirCacheEntry.STAGE_0); entry.setObjectId(mId); entry.setFileMode(mode); builder.add(entry); } } /** * If true, will scan first to see if it's possible to check * out, otherwise throw {@link CheckoutConflictException}. If * false, it will silently deal with the problem. * * @param failOnConflict */ public void setFailOnConflict(boolean failOnConflict) { this.failOnConflict = failOnConflict; } /** * This method implements how to handle conflicts when * {@link #failOnConflict} is false * * @throws CheckoutConflictException */ private void cleanUpConflicts() throws CheckoutConflictException { // TODO: couldn't we delete unsaved worktree content here? for (String c : conflicts) { File conflict = new File(repo.getWorkTree(), c); if (!conflict.delete()) throw new CheckoutConflictException(MessageFormat.format( JGitText.get().cannotDeleteFile, c)); removeEmptyParents(conflict); } for (String r : removed) { File file = new File(repo.getWorkTree(), r); if (!file.delete()) throw new CheckoutConflictException( MessageFormat.format(JGitText.get().cannotDeleteFile, file.getAbsolutePath())); removeEmptyParents(file); } } /** * Checks whether the subtree starting at a given path differs between Index and * workingtree. * * @param path * @return true if the subtrees differ * @throws CorruptObjectException * @throws IOException */ private boolean isModifiedSubtree_IndexWorkingtree(String path) throws CorruptObjectException, IOException { NameConflictTreeWalk tw = new NameConflictTreeWalk(repo); try { tw.addTree(new DirCacheIterator(dc)); tw.addTree(new FileTreeIterator(repo)); tw.setRecursive(true); tw.setFilter(PathFilter.create(path)); DirCacheIterator dcIt; WorkingTreeIterator wtIt; while (tw.next()) { dcIt = tw.getTree(0, DirCacheIterator.class); wtIt = tw.getTree(1, WorkingTreeIterator.class); if (dcIt == null || wtIt == null) return true; if (wtIt.isModified(dcIt.getDirCacheEntry(), true, this.walk.getObjectReader())) { return true; } } return false; } finally { tw.release(); } } private boolean isModified_IndexTree(String path, ObjectId iId, FileMode iMode, ObjectId tId, FileMode tMode, ObjectId rootTree) throws CorruptObjectException, IOException { if (iMode != tMode) return true; if (FileMode.TREE.equals(iMode) && (iId == null || ObjectId.zeroId().equals(iId))) return isModifiedSubtree_IndexTree(path, rootTree); else return !equalIdAndMode(iId, iMode, tId, tMode); } /** * Checks whether the subtree starting at a given path differs between Index and * some tree. * * @param path * @param tree * the tree to compare * @return true if the subtrees differ * @throws CorruptObjectException * @throws IOException */ private boolean isModifiedSubtree_IndexTree(String path, ObjectId tree) throws CorruptObjectException, IOException { NameConflictTreeWalk tw = new NameConflictTreeWalk(repo); try { tw.addTree(new DirCacheIterator(dc)); tw.addTree(tree); tw.setRecursive(true); tw.setFilter(PathFilter.create(path)); while (tw.next()) { AbstractTreeIterator dcIt = tw.getTree(0, DirCacheIterator.class); AbstractTreeIterator treeIt = tw.getTree(1, AbstractTreeIterator.class); if (dcIt == null || treeIt == null) return true; if (dcIt.getEntryRawMode() != treeIt.getEntryRawMode()) return true; if (!dcIt.getEntryObjectId().equals(treeIt.getEntryObjectId())) return true; } return false; } finally { tw.release(); } } /** * Updates the file in the working tree with content and mode from an entry * in the index. The new content is first written to a new temporary file in * the same directory as the real file. Then that new file is renamed to the * final filename. Use this method only for checkout of a single entry. * Otherwise use * {@code checkoutEntry(Repository, File f, DirCacheEntry, ObjectReader)} * instead which allows to reuse one {@code ObjectReader} for multiple * entries. * *

* TODO: this method works directly on File IO, we may need another * abstraction (like WorkingTreeIterator). This way we could tell e.g. * Eclipse that Files in the workspace got changed *

* * @param repository * @param f * the file to be modified. The parent directory for this file * has to exist already * @param entry * the entry containing new mode and content * @throws IOException */ public static void checkoutEntry(final Repository repository, File f, DirCacheEntry entry) throws IOException { ObjectReader or = repository.newObjectReader(); try { checkoutEntry(repository, f, entry, repository.newObjectReader()); } finally { or.release(); } } /** * Updates the file in the working tree with content and mode from an entry * in the index. The new content is first written to a new temporary file in * the same directory as the real file. Then that new file is renamed to the * final filename. * *

* TODO: this method works directly on File IO, we may need another * abstraction (like WorkingTreeIterator). This way we could tell e.g. * Eclipse that Files in the workspace got changed *

* * @param repo * @param f * the file to be modified. The parent directory for this file * has to exist already * @param entry * the entry containing new mode and content * @param or * object reader to use for checkout * @throws IOException */ public static void checkoutEntry(final Repository repo, File f, DirCacheEntry entry, ObjectReader or) throws IOException { ObjectLoader ol = or.open(entry.getObjectId()); File parentDir = f.getParentFile(); parentDir.mkdirs(); FS fs = repo.getFS(); WorkingTreeOptions opt = repo.getConfig().get(WorkingTreeOptions.KEY); if (entry.getFileMode() == FileMode.SYMLINK && opt.getSymLinks() == SymLinks.TRUE) { byte[] bytes = ol.getBytes(); String target = RawParseUtils.decode(bytes); fs.createSymLink(f, target); entry.setLength(bytes.length); entry.setLastModified(fs.lastModified(f)); } else { File tmpFile = File.createTempFile( "._" + f.getName(), null, parentDir); //$NON-NLS-1$ FileOutputStream rawChannel = new FileOutputStream(tmpFile); OutputStream channel; if (opt.getAutoCRLF() == AutoCRLF.TRUE) channel = new AutoCRLFOutputStream(rawChannel); else channel = rawChannel; try { ol.copyTo(channel); } finally { channel.close(); } if (opt.isFileMode() && fs.supportsExecute()) { if (FileMode.EXECUTABLE_FILE.equals(entry.getRawMode())) { if (!fs.canExecute(tmpFile)) fs.setExecute(tmpFile, true); } else { if (fs.canExecute(tmpFile)) fs.setExecute(tmpFile, false); } } try { FileUtils.rename(tmpFile, f); } catch (IOException e) { throw new IOException(MessageFormat.format( JGitText.get().renameFileFailed, tmpFile.getPath(), f.getPath())); } } entry.setLastModified(f.lastModified()); if (opt.getAutoCRLF() != AutoCRLF.FALSE) entry.setLength(f.length()); // AutoCRLF wants on-disk-size else entry.setLength((int) ol.getSize()); } private static void checkValidPath(CanonicalTreeParser t) throws InvalidPathException { ObjectChecker chk = new ObjectChecker() .setSafeForWindows(SystemReader.getInstance().isWindows()) .setSafeForMacOS(SystemReader.getInstance().isMacOS()); for (CanonicalTreeParser i = t; i != null; i = i.getParent()) checkValidPathSegment(chk, i); } /** * Check if path is a valid path for a checked out file name or ref name. * * @param path * @throws InvalidPathException * if the path is invalid * @since 3.3 */ public static void checkValidPath(String path) throws InvalidPathException { ObjectChecker chk = new ObjectChecker() .setSafeForWindows(SystemReader.getInstance().isWindows()) .setSafeForMacOS(SystemReader.getInstance().isMacOS()); byte[] bytes = Constants.encode(path); int segmentStart = 0; try { for (int i = 0; i < bytes.length; i++) { if (bytes[i] == '/') { chk.checkPathSegment(bytes, segmentStart, i); segmentStart = i + 1; } } chk.checkPathSegment(bytes, segmentStart, bytes.length); } catch (CorruptObjectException e) { throw new InvalidPathException(e.getMessage()); } } private static void checkValidPathSegment(ObjectChecker chk, CanonicalTreeParser t) throws InvalidPathException { try { int ptr = t.getNameOffset(); int end = ptr + t.getNameLength(); chk.checkPathSegment(t.getEntryPathBuffer(), ptr, end); } catch (CorruptObjectException err) { String path = t.getEntryPathString(); InvalidPathException i = new InvalidPathException(path); i.initCause(err); throw i; } } }




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