com.marklogic.contentpump.CompressedAggXMLReader Maven / Gradle / Ivy
/*
* Copyright (c) 2020 MarkLogic Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package com.marklogic.contentpump;
import java.io.IOException;
import java.io.InputStream;
import java.util.zip.GZIPInputStream;
import java.util.zip.ZipEntry;
import javax.xml.stream.XMLInputFactory;
import javax.xml.stream.XMLStreamException;
import org.apache.commons.logging.Log;
import org.apache.commons.logging.LogFactory;
import org.apache.hadoop.fs.FSDataInputStream;
import org.apache.hadoop.fs.FileStatus;
import org.apache.hadoop.mapreduce.InputSplit;
import org.apache.hadoop.mapreduce.TaskAttemptContext;
import org.apache.hadoop.mapreduce.lib.input.FileSplit;
import com.marklogic.contentpump.utilities.FileIterator;
import com.marklogic.contentpump.utilities.IdGenerator;
import com.marklogic.contentpump.utilities.ZipInputStream;
import com.marklogic.mapreduce.CompressionCodec;
/**
* Reader for CompressedAggXMLInputFormat.
*
* @author ali
*
* @param
*/
public class CompressedAggXMLReader extends
AggregateXMLReader {
public static final Log LOG = LogFactory
.getLog(CompressedAggXMLReader.class);
private InputStream zipIn;
private ZipEntry currZipEntry;
private CompressionCodec codec;
@Override
public void close() throws IOException {
super.close();
//close the zip
if (zipIn != null) {
if (zipIn instanceof ZipInputStream) {
((ZipInputStream)zipIn).closeStream();
}
zipIn.close();
}
}
@Override
public void initialize(InputSplit inSplit, TaskAttemptContext context)
throws IOException, InterruptedException {
initConfig(context);
initAggConf(context);
f = XMLInputFactory.newInstance();
setFile(((FileSplit) inSplit).getPath());
fs = file.getFileSystem(context.getConfiguration());
FileStatus status = fs.getFileStatus(file);
if(status.isDirectory()) {
iterator = new FileIterator((FileSplit)inSplit, context);
inSplit = iterator.next();
}
initStreamReader(inSplit);
}
protected void initStreamReader(InputSplit inSplit) throws IOException,
InterruptedException {
FSDataInputStream fileIn = openFile(inSplit, false);
if (fileIn == null) {
return;
}
String codecString = conf.get(
ConfigConstants.CONF_INPUT_COMPRESSION_CODEC,
CompressionCodec.ZIP.toString());
if (codecString.equalsIgnoreCase(CompressionCodec.ZIP.toString())) {
zipIn = new ZipInputStream(fileIn);
codec = CompressionCodec.ZIP;
while (true) {
try {
currZipEntry = ((ZipInputStream)zipIn).getNextEntry();
if (currZipEntry == null) {
break;
}
if (currZipEntry.getSize() != 0) {
subId = currZipEntry.getName();
break;
}
} catch (IllegalArgumentException e) {
LOG.warn("Skipped a zip entry in : " + file.toUri()
+ ", reason: " + e.getMessage());
}
}
if (currZipEntry == null) { // no entry in zip
LOG.warn("No valid entry in zip:" + file.toUri());
return;
}
try {
start = 0;
end = currZipEntry.getSize();
xmlSR = f.createXMLStreamReader(zipIn, encoding);
} catch (XMLStreamException e) {
LOG.error(e.getMessage(), e);
}
} else if (codecString.equalsIgnoreCase(CompressionCodec.GZIP
.toString())) {
zipIn = new GZIPInputStream(fileIn);
codec = CompressionCodec.GZIP;
try {
start = 0;
end = inSplit.getLength();
xmlSR = f.createXMLStreamReader(zipIn, encoding);
} catch (XMLStreamException e) {
LOG.error(e.getMessage(), e);
}
} else {
throw new UnsupportedOperationException("Unsupported codec: "
+ codecString);
}
if (useAutomaticId) {
idGen = new IdGenerator(file.toUri().getPath() + "-"
+ ((FileSplit)inSplit).getStart());
}
}
private boolean nextRecordInAggregate() throws IOException,
XMLStreamException, InterruptedException {
return super.nextKeyValue();
}
@Override
public boolean nextKeyValue() throws IOException, InterruptedException {
if (zipIn == null || xmlSR == null) {
hasNext = false;
return false;
}
try {
if (codec.equals(CompressionCodec.ZIP)) {
if (xmlSR.hasNext()) {
hasNext = nextRecordInAggregate();
if (hasNext) {
return true;
}
}
// xmlSR does not hasNext,
// if there is next zipEntry, close xmlSR then create a new one
while (true) {
try {
currZipEntry = ((ZipInputStream)zipIn).getNextEntry();
if (currZipEntry == null) {
break;
}
if (currZipEntry.getSize() == 0) {
continue;
}
subId = currZipEntry.getName();
xmlSR.close();
start = 0;
end = currZipEntry.getSize();
xmlSR = f.createXMLStreamReader(zipIn, encoding);
nameSpaces.clear();
return nextRecordInAggregate();
} catch (IllegalArgumentException e) {
LOG.warn("Skipped a zip entry in : " + file.toUri()
+ ", reason: " + e.getMessage());
}
}
// end of zip
if (iterator != null && iterator.hasNext()) {
//close previous zip and streams
close();
initStreamReader(iterator.next());
return nextRecordInAggregate();
}
//current split doesn't have more zip
return false;
} else if (codec.equals(CompressionCodec.GZIP)) {
if(nextRecordInAggregate()) {
return true;
}
// move to next gzip file in this split
if (iterator != null && iterator.hasNext()) {
// close previous zip and streams
close();
initStreamReader(iterator.next());
return nextRecordInAggregate();
}
return false;
}
} catch (XMLStreamException e) {
LOG.error(e.getMessage(), e);
}
return true;
}
public CompressedAggXMLReader() {
super();
compressed = true;
}
@Override
public float getProgress() throws IOException, InterruptedException {
return hasNext ? 0 : 1;
}
}
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