eu.mihosoft.vrl.v3d.ext.imagej.STLLoader Maven / Gradle / Ivy
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A Java based CSG Cad library
package eu.mihosoft.vrl.v3d.ext.imagej;
/**
* Fork of
* https://github.com/fiji/fiji/blob/master/src-plugins/3D_Viewer/src/main/java/customnode/STLLoader.java
*
* TODO: license unclear
*/
import java.io.BufferedReader;
import java.io.File;
import java.io.FileInputStream;
import java.io.FileNotFoundException;
import java.io.FileReader;
import java.io.IOException;
import java.text.DecimalFormat;
import java.text.ParseException;
import java.util.ArrayList;
import eu.mihosoft.vrl.v3d.Vector3d;
;
// TODO: Auto-generated Javadoc
/**
* The Class STLLoader.
*/
public class STLLoader {
// /**
// * Load the specified stl file and returns the result as a hash map, mapping
// * the object names to the corresponding CustomMesh objects.
// */
// public static Map load(String stlfile)
// throws IOException {
// STLLoader sl = new STLLoader();
// try {
// sl.parse(stlfile);
// } catch (RuntimeException e) {
// ////System.out.println("error reading " + sl.name);
// throw e;
// }
// return sl.meshes;
// }
//
/**
* Instantiates a new STL loader.
*/
// private HashMap meshes;
public STLLoader() {
}
/** The line. */
String line;
/** The in. */
BufferedReader in;
/** The vertices. */
// attributes of the currently read mesh
private ArrayList vertices = new ArrayList<>();
/** The normal. */
private Vector3d normal = new Vector3d(0.0f, 0.0f, 0.0f); // to be used for file checking
/** The fis. */
private FileInputStream fis;
/** The triangles. */
private int triangles;
// private DecimalFormat decimalFormat = new DecimalFormat("0.0E0");
/**
* Parses the.
*
* @param f the f
* @return the array list
* @throws IOException Signals that an I/O exception has occurred.
*/
public ArrayList parse(File f) throws IOException {
vertices.clear();
// determine if this is a binary or ASCII STL
// and send to the appropriate parsing method
// Hypothesis 1: this is an ASCII STL
try {
BufferedReader br = new BufferedReader(new FileReader(f));
String line = br.readLine();
String[] words = line.trim().split("\\s+");
if (line.indexOf('\0') < 0 && words[0].equalsIgnoreCase("solid")) {
////// System.out.println("Looks like an ASCII STL");
parseAscii(f);
br.close();
return vertices;
}
br.close();
} catch (java.lang.NullPointerException ex) {
ex.printStackTrace();
} // the split cna fail on binary stls
// Hypothesis 2: this is a binary STL
FileInputStream fs = new FileInputStream(f);
// bytes 80, 81, 82 and 83 form a little-endian int
// that contains the number of triangles
byte[] buffer = new byte[84];
fs.read(buffer, 0, 84);
fs.close();
triangles = (int) (((buffer[83] & 0xff) << 24) | ((buffer[82] & 0xff) << 16) | ((buffer[81] & 0xff) << 8)
| (buffer[80] & 0xff));
if (((f.length() - 84) / 50) == triangles) {
////// System.out.println("Looks like a binary STL");
parseBinary(f);
return vertices;
}
// System.out.println("File is not a valid STL");
return vertices;
}
/**
* Parses the ascii.
*
* @param f the f
*/
private void parseAscii(File f) {
try {
in = new BufferedReader(new FileReader(f));
} catch (FileNotFoundException e) {
e.printStackTrace();
}
vertices = new ArrayList<>();
try {
while ((line = in.readLine()) != null) {
String[] numbers = line.trim().split("\\s+");
if (numbers[0].equals("vertex")) {
double x = parseDouble(numbers[1]);
double y = parseDouble(numbers[2]);
double z = parseDouble(numbers[3]);
Vector3d vertex = new Vector3d(x, y, z);
vertices.add(vertex);
} else if (numbers[0].equals("facet") && numbers[1].equals("normal")) {
normal.x = parseDouble(numbers[2]);
normal.y = parseDouble(numbers[3]);
normal.z = parseDouble(numbers[4]);
}
}
in.close();
} catch (IOException e) {
e.printStackTrace();
} catch (ParseException e) {
e.printStackTrace();
}
}
/**
* Parses the binary.
*
* @param f the f
*/
private void parseBinary(File f) {
vertices = new ArrayList();
try {
fis = new FileInputStream(f);
for (int h = 0; h < 84; h++) {
fis.read();// skip the header bytes
}
for (int t = 0; t < triangles; t++) {
byte[] tri = new byte[50];
for (int tb = 0; tb < 50; tb++) {
tri[tb] = (byte) fis.read();
}
normal.x = leBytesToFloat(tri[0], tri[1], tri[2], tri[3]);
normal.y = leBytesToFloat(tri[4], tri[5], tri[6], tri[7]);
normal.z = leBytesToFloat(tri[8], tri[9], tri[10], tri[11]);
for (int i = 0; i < 3; i++) {
final int j = i * 12 + 12;
double px = leBytesToFloat(tri[j], tri[j + 1], tri[j + 2], tri[j + 3]);
double py = leBytesToFloat(tri[j + 4], tri[j + 5], tri[j + 6], tri[j + 7]);
double pz = leBytesToFloat(tri[j + 8], tri[j + 9], tri[j + 10], tri[j + 11]);
Vector3d p = new Vector3d(px, py, pz);
vertices.add(p);
}
}
fis.close();
} catch (FileNotFoundException e) {
e.printStackTrace();
} catch (IOException e) {
e.printStackTrace();
}
}
// private double parseFloat(String string) throws ParseException {
// //E+05 -> E05, e+05 -> E05
// string = string.replaceFirst("[eE]\\+", "E");
// //E-05 -> E-05, e-05 -> E-05
// string = string.replaceFirst("e\\-", "E-");
// return decimalFormat.parse(string).doubleValue();
// }
/**
* Parses the double.
*
* @param string the string
* @return the double
* @throws ParseException the parse exception
*/
private double parseDouble(String string) throws ParseException {
return Double.parseDouble(string);
}
/**
* Le bytes to double.
*
* @param b0 the b0
* @param b1 the b1
* @param b2 the b2
* @param b3 the b3
* @return the double
*/
private double leBytesToFloat(byte b0, byte b1, byte b2, byte b3) {
return Float.intBitsToFloat((((b3 & 0xff) << 24) | ((b2 & 0xff) << 16) | ((b1 & 0xff) << 8) | (b0 & 0xff)));
}
}
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