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    Download jannovar-htsjdk JAR 0.21 with all dependencies


    jannovar-htsjdk is the module for bridging between Jannovar and HTSJDK

    Files of the artifact jannovar-htsjdk version 0.21 from the group de.charite.compbio.

    Test

    Artifact jannovar-htsjdk
    Group de.charite.compbio
    Version 0.21
    Last update 04. April 2017
    Tags: module bridging htsjdk between jannovar
    Organization not specified
    URL http://charite.github.io/jannovar/
    License not specified
    Dependencies amount 6
    Dependencies commons-io, commons-net, guava, htsjdk, jannovar-core, jannovar-hgvs,
    There are maybe transitive dependencies!
    There is a newer version: 0.41
    Show newest version
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    Source code of jannovar-htsjdk version 0.21

    META-INF
    META-INF.META-INF.MANIFEST.MF
    de.charite.compbio.jannovar.hgvs.bridge
    de.charite.compbio.jannovar.hgvs.bridge.de.charite.compbio.jannovar.hgvs.bridge.CannotTranslateHGVSVariant
    de.charite.compbio.jannovar.hgvs.bridge.de.charite.compbio.jannovar.hgvs.bridge.NucleotideChangeToGenomeVariantTranslationImplBase
    de.charite.compbio.jannovar.hgvs.bridge.de.charite.compbio.jannovar.hgvs.bridge.NucleotideChangeToGenomeVariantTranslator
    de.charite.compbio.jannovar.hgvs.bridge.de.charite.compbio.jannovar.hgvs.bridge.NucleotideDeletionToGenomeVariantTranslationImpl
    de.charite.compbio.jannovar.hgvs.bridge.de.charite.compbio.jannovar.hgvs.bridge.NucleotideDuplicationToGenomeVariantTranslationImpl
    de.charite.compbio.jannovar.hgvs.bridge.de.charite.compbio.jannovar.hgvs.bridge.NucleotideIndelToGenomeVariantTranslationImpl
    de.charite.compbio.jannovar.hgvs.bridge.de.charite.compbio.jannovar.hgvs.bridge.NucleotideInsertionToGenomeVariantTranslationImpl
    de.charite.compbio.jannovar.hgvs.bridge.de.charite.compbio.jannovar.hgvs.bridge.NucleotideInversionToGenomeVariantTranslationImpl
    de.charite.compbio.jannovar.hgvs.bridge.de.charite.compbio.jannovar.hgvs.bridge.NucleotideLocationConverter
    de.charite.compbio.jannovar.hgvs.bridge.de.charite.compbio.jannovar.hgvs.bridge.NucleotideSubstitutionToGenomeVariantTranslationImpl
    de.charite.compbio.jannovar.hgvs.bridge.de.charite.compbio.jannovar.hgvs.bridge.ResultWithWarnings
    de.charite.compbio.jannovar.htsjdk
    de.charite.compbio.jannovar.htsjdk.de.charite.compbio.jannovar.htsjdk.GenomeRegionSequenceExtractor
    de.charite.compbio.jannovar.htsjdk.de.charite.compbio.jannovar.htsjdk.InvalidCoordinatesException
    de.charite.compbio.jannovar.htsjdk.de.charite.compbio.jannovar.htsjdk.VariantContextAnnotator
    de.charite.compbio.jannovar.htsjdk.de.charite.compbio.jannovar.htsjdk.VariantContextWriterConstructionHelper
    de.charite.compbio.jannovar.htsjdk.de.charite.compbio.jannovar.htsjdk.VariantEffectHeaderExtender
    de.charite.compbio.jannovar.mendel.bridge
    de.charite.compbio.jannovar.mendel.bridge.de.charite.compbio.jannovar.mendel.bridge.CannotAnnotateMendelianInheritance
    de.charite.compbio.jannovar.mendel.bridge.de.charite.compbio.jannovar.mendel.bridge.MendelVCFHeaderExtender
    de.charite.compbio.jannovar.mendel.bridge.de.charite.compbio.jannovar.mendel.bridge.VariantContextMendelianAnnotator
    de.charite.compbio.jannovar.mendel.filter
    de.charite.compbio.jannovar.mendel.filter.de.charite.compbio.jannovar.mendel.filter.ConsumerProcessor
    de.charite.compbio.jannovar.mendel.filter.de.charite.compbio.jannovar.mendel.filter.CoordinateSortingChecker
    de.charite.compbio.jannovar.mendel.filter.de.charite.compbio.jannovar.mendel.filter.Gene
    de.charite.compbio.jannovar.mendel.filter.de.charite.compbio.jannovar.mendel.filter.GeneBuilder
    de.charite.compbio.jannovar.mendel.filter.de.charite.compbio.jannovar.mendel.filter.GeneIntervalEndExtractor
    de.charite.compbio.jannovar.mendel.filter.de.charite.compbio.jannovar.mendel.filter.GeneList
    de.charite.compbio.jannovar.mendel.filter.de.charite.compbio.jannovar.mendel.filter.GeneWiseMendelianAnnotationProcessor
    de.charite.compbio.jannovar.mendel.filter.de.charite.compbio.jannovar.mendel.filter.VariantContextCounter
    de.charite.compbio.jannovar.mendel.filter.de.charite.compbio.jannovar.mendel.filter.VariantContextFilterException
    de.charite.compbio.jannovar.mendel.filter.de.charite.compbio.jannovar.mendel.filter.VariantContextProcessor
    de.charite.compbio.jannovar.progress
    de.charite.compbio.jannovar.progress.de.charite.compbio.jannovar.progress.GenomeRegion
    de.charite.compbio.jannovar.progress.de.charite.compbio.jannovar.progress.GenomeRegionList
    de.charite.compbio.jannovar.progress.de.charite.compbio.jannovar.progress.GenomeRegionListFactoryFromSAMSequenceDictionary
    de.charite.compbio.jannovar.progress.de.charite.compbio.jannovar.progress.ProgressReporter
    .project.properties




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