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/**
* Copyright 2007 DFKI GmbH.
* All Rights Reserved. Use is subject to license terms.
*
* This file is part of MARY TTS.
*
* MARY TTS is free software: you can redistribute it and/or modify
* it under the terms of the GNU Lesser General Public License as published by
* the Free Software Foundation, version 3 of the License.
*
* This program is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU Lesser General Public License for more details.
*
* You should have received a copy of the GNU Lesser General Public License
* along with this program. If not, see createDBConnection method creates the database connection.
*
* @param host
* a String value. The database host e.g. 'localhost'.
* @param db
* a String value. The database to connect to.
* @param user
* a String value. Database user that has excess to the database.
* @param passwd
* a String value. The 'secret' password.
* @return true if connection was succesfull, false otherwise
*/
public boolean createDBConnection(String host, String db, String user, String passwd) {
boolean result = false;
String url = "jdbc:mysql://" + host + "/" + db + "?jdbcCompliantTruncation=false";
try {
Properties p = new Properties();
p.put("user", user);
p.put("password", passwd);
p.put("database", db);
p.put("useUnicode", "true");
p.put("characterEncoding", "utf8");
cn = DriverManager.getConnection(url, p);
st = cn.createStatement();
psCleanText = cn.prepareStatement("INSERT INTO " + cleanTextTableName + " VALUES (null, ?, ?, ?, ?)");
psWord = cn.prepareStatement("INSERT INTO " + wordListTableName + " VALUES (null, ?, ?)");
psSentence = cn.prepareStatement("INSERT INTO " + dbselectionTableName + " VALUES (null, ?, ?, ?, ?, ?, ?, ?, ?)");
psSelectedSentence = cn.prepareStatement("INSERT INTO " + selectedSentencesTableName + " VALUES (null, ?, ?, ?)");
psTablesDescription = cn.prepareStatement("INSERT INTO tablesDescription VALUES (null, ?, ?, ?, ?, ?, ?, ?)");
result = true;
System.out.println("Mysql connection created successfully.");
} catch (Exception e) {
System.out.println("Problems creating Mysql connection.");
e.printStackTrace();
}
return result;
}
/***
* Use mwdumper for extracting pages from a XML wikipedia dump file. The mwdumper reads a xml wikipedia file and extract the
* tables "text", "page" and "revision" in sql format. In this configuration the mwdumper creates a connection to the DB and
* load directly the tables, so the tables must be already created and they should be empty. Here these tables are created
* empty using the function createEmptyWikipediaTables, this function deletes any existing text, page and revision table
* before creating new ones.
*
* @param xmlFile
* xml dump file
* @param lang
* locale language
* @param host
* host
* @param db
* db
* @param user
* user
* @param passwd
* passwd
* @throws Exception
* Exception
*/
public void loadPagesWithMWDumper(String xmlFile, String lang, String host, String db, String user, String passwd)
throws Exception {
DBHandler wikiDB = new DBHandler(lang);
System.out
.println("Using mwdumper to convert xml file into sql source file and loading text, page and revision tables into the DB.");
System.out.println("Creating connection to DB server...");
wikiDB.createDBConnection(host, db, user, passwd);
// Before runing the mwdumper the tables text, page and revision should be created empty.
// If the tables exist, it could be that other user/process is using these tables so in that case
// the program will stop. If no other user/program is using these tables the user has the option of deleting them.
if (wikiDB.createEmptyWikipediaTables()) {
// Very old: dump into sql file:
// Run the mwdumper jar file xml -> sql
// Use these parameters for saving the output in a dump.sql source file
/*
* String sqlDump = "dump.sql"; String[] argsDump = new String[3]; argsDump[0] = "--output=file:"+sqlDump; argsDump[1]
* = "--format=sql:1.5"; argsDump[2] = xmlFile;
*/
/*
* Old: run Dumper as if it was called from the command line: // Use these parameters for loading the pages direclty
* in the DB String[] argsDump = new String[3]; argsDump[0] = "--output=mysql://" + host + "/" + db + "?user=" + user
* + "&password=" + passwd + "&useUnicode=true&characterEncoding=utf8"; argsDump[1] = "--format=sql:1.5"; argsDump[2]
* = xmlFile;
*
* //--- The following ClassLoader code from: //
* http://java.sun.com/docs/books/tutorial/deployment/jar/examples/JarClassLoader.java // Class c = loadClass(name);
* // this does not work (example from sun) // Class c = Class.forName("org.mediawiki.dumper.Dumper"); // this works
* Class c = ClassLoader.getSystemClassLoader().loadClass("org.mediawiki.dumper.Dumper"); // this also works Method m
* = c.getMethod("main", new Class[] { argsDump.getClass() }); m.setAccessible(true); int mods = m.getModifiers(); if
* (m.getReturnType() != void.class || !Modifier.isStatic(mods) || !Modifier.isPublic(mods)) { throw new
* NoSuchMethodException("main"); } try { m.invoke(null, new Object[] { argsDump });
*
* } catch (IllegalAccessException e) { // This should not happen, as we have disabled access checks }
*/
// Call mwdumper code directly:
SqlStream sqlStream = new SqlServerStream(wikiDB.cn);
DumpWriter sqlWriter = new SqlWriter15(new SqlWriter.MySQLTraits(), sqlStream);
File tmpFile = new File(xmlFile + "_filtered");
BufferedReader in = new BufferedReader(new InputStreamReader(new FileInputStream(xmlFile), "UTF-8"));
BufferedWriter out = new BufferedWriter(new OutputStreamWriter(new FileOutputStream(tmpFile), "UTF-8"));
int read = -1;
char[] buf = new char[4096];
while ((read = in.read(buf)) > 0) {
out.write(buf, 0, read);
}
in.close();
out.close();
InputStream filteredInput = new BufferedInputStream(new FileInputStream(tmpFile));
XmlDumpReader xmlReader = new XmlDumpReader(filteredInput, sqlWriter);
xmlReader.readDump(); // this will close wikiDB.cn, so that it will have to be opened again:
tmpFile.delete();
if (wikiDB.cn.isClosed()) {
wikiDB.createDBConnection(host, db, user, passwd);
}
// Now I need to add/change the prefix locale to the table names
// Renaming tables
wikiDB.addLocalePrefixToWikipediaTables(); // this change the name of already created and loaded tables
} else {
wikiDB.closeDBConnection();
// problems creating the tables
System.exit(1);
}
}
/****************************************************************************************
* FUNCTIONS FOR CREATING TABLES
****************************************************************************************/
/***
* Ask the user if the table should be deleted
*
* @param table
* table
* @return true if user answers false otherwise.
*/
public boolean askIfDeletingTable(String table) {
char c;
boolean result = false;
InputStreamReader isr = new InputStreamReader(System.in);
BufferedReader br = new BufferedReader(isr);
boolean wikipediaTables = false;
String helpToContinue = "\n ***To continue please check if the table \""
+ table
+ "\" is used by another user/process.*** \n"
+ " Tables \"text\", \"page\" and \"revision\" are temporary tables used by mwdumper to extract wikipedia pages. \n"
+ " Just one user/process can use these tables at the same time in the same DataBase, please use other DataBase if possible.\n"
+ " If the tables are not in use by any other user/process please use the option for deleting.\n";
if (table.contentEquals("text") || table.contentEquals("page") || table.contentEquals("revision")) {
System.out.println(helpToContinue);
wikipediaTables = true;
}
System.out.print(" TABLE = \"" + table + "\" already exists deleting (y/n)?");
try {
String s = br.readLine();
if (s.contentEquals("y")) {
result = true;
} else {
if (wikipediaTables)
System.out.println("\nTo continue please check if the table \"" + table + "\" can be deleted "
+ "or is used by another user/process.\n");
else
System.out.println(" Adding data to TABLE = \"" + table + "\".\n");
result = false;
}
} catch (Exception e) {
System.out.println(e);
}
return result;
}
/***
* This table contains information about tables in the DB, specially for selected sentences tables.
*/
public void createTablesDescriptionTable() {
String tables = "CREATE TABLE IF NOT EXISTS tablesDescription ( id INT NOT NULL AUTO_INCREMENT, " + "name TINYTEXT,"
+ "description MEDIUMTEXT," + "stopCriterion TINYTEXT," + "featuresDefinitionFileName TINYTEXT,"
+ "featuresDefinitionFile MEDIUMTEXT," + "covDefConfigFileName TINYTEXT," + "covDefConfigFile MEDIUMTEXT,"
+ "primary key(id)) CHARACTER SET utf8;";
try {
boolean res = st.execute(tables);
} catch (SQLException e) {
e.printStackTrace();
}
}
/***
* Creates dbselectionTable
*
*
*/
public void createDataBaseSelectionTable() {
String dbselection = "CREATE TABLE " + dbselectionTableName + " ( id INT NOT NULL AUTO_INCREMENT, "
+ "sentence MEDIUMBLOB NOT NULL, " + "features BLOB, " + "reliable BOOLEAN, " + "unknownWords BOOLEAN, "
+ "strangeSymbols BOOLEAN, " + "selected BOOLEAN, " + "unwanted BOOLEAN, "
+ "cleanText_id INT UNSIGNED NOT NULL, " + // the cleanText id where this sentence comes from
"primary key(id)) CHARACTER SET utf8;";
String str;
boolean dbExist = false;
// if database does not exist create it, if it exists it will continue adding sentences to this table
System.out.println("Checking if " + dbselectionTableName + " already exist.");
try {
rs = st.executeQuery("SHOW TABLES;");
} catch (Exception e) {
e.printStackTrace();
}
try {
while (rs.next()) {
str = rs.getString(1);
if (str.contentEquals(dbselectionTableName)) {
System.out.println("TABLE = " + str + " already exist, adding sentences to this table.");
dbExist = true;
}
}
boolean res;
// if DB exists does not exist it will be created
if (!dbExist) {
res = st.execute(dbselection);
System.out.println("TABLE = " + dbselectionTableName + " succesfully created.");
}
} catch (SQLException e) {
e.printStackTrace();
}
}
/***
* Creates a selectedSentencesTable.
*
* @param stopCriterion
* stopCriterion
* @param featDefFileName
* featDefFileName
* @param covDefConfigFileName
* covDefConfigFileName
*/
public void createSelectedSentencesTable(String stopCriterion, String featDefFileName, String covDefConfigFileName) {
String selected = "CREATE TABLE " + selectedSentencesTableName + " ( id INT NOT NULL AUTO_INCREMENT, "
+ "sentence MEDIUMBLOB NOT NULL, " + "unwanted BOOLEAN, " + "dbselection_id INT UNSIGNED NOT NULL, " + // the
// dbselection
// id
// where
// this
// sentence
// comes
// from
"primary key(id)) CHARACTER SET utf8;";
String str;
boolean dbExist = false;
// if database does not exist create it
System.out.println("\nChecking if " + selectedSentencesTableName + " already exist.");
try {
rs = st.executeQuery("SHOW TABLES;");
} catch (Exception e) {
e.printStackTrace();
}
try {
while (rs.next()) {
str = rs.getString(1);
if (str.contentEquals(selectedSentencesTableName)) {
System.out.println(" TABLE = " + str + " already exist. New selected sentences "
+ "will be added to this table.");
dbExist = true;
}
}
// Ask if delete?
// if(dbExist && !askIfDeletingTable(selectedSentencesTableName) )
// result = false;
if (!dbExist) {
// if creating a new table then the set the fields selected=false and unwanted=false
// in dbselection table
System.out.println(" TABLE = " + selectedSentencesTableName + " does not exist, creating a new table and ");
// System.out.println(" Initialising fields selected=false and unwanted=false in TABLE = " +
// dbselectionTableName);
System.out.println(" Initialising fields selected=false in TABLE = " + dbselectionTableName
+ " (Previously selected sentences marked as unwanted will be kept)");
updateTable("UPDATE " + dbselectionTableName + " SET selected=false;");
// updateTable("UPDATE " + dbselectionTableName + " SET unwanted=false;");
boolean res = st.execute(selected);
System.out.println(" TABLE = " + selectedSentencesTableName + " succesfully created.");
}
} catch (SQLException e) {
e.printStackTrace();
}
}
/***
* This function creates text, page and revision tables loading them from text files.
*
* @param textFile
* textFile
* @param pageFile
* pageFile
* @param revisionFile
* revisionFile
*/
public void createAndLoadWikipediaTables(String textFile, String pageFile, String revisionFile) {
String createTextTable = "CREATE TABLE " + locale + "_text (" + " old_id int UNSIGNED NOT NULL AUTO_INCREMENT,"
+ " old_text mediumblob NOT NULL," + " old_flags tinyblob NOT NULL," + " PRIMARY KEY old_id (old_id)"
+ " ) MAX_ROWS=250000 AVG_ROW_LENGTH=10240;";
String createPageTable = "CREATE TABLE " + locale + "_page (" + "page_id int UNSIGNED NOT NULL AUTO_INCREMENT,"
+ "page_namespace int(11) NOT NULL," + "page_title varchar(255) NOT NULL,"
+ "page_restrictions tinyblob NOT NULL," + "page_counter bigint(20) unsigned NOT NULL,"
+ "page_is_redirect tinyint(3) unsigned NOT NULL," + "page_is_new tinyint(3) unsigned NOT NULL,"
+ "page_random double unsigned NOT NULL," + "page_touched binary(14) NOT NULL,"
+ "page_latest int(10) unsigned NOT NULL," + "page_len int(10) unsigned NOT NULL,"
+ "PRIMARY KEY page_id (page_id)," + "KEY page_namespace (page_namespace)," + "KEY page_random (page_random),"
+ "KEY page_len (page_len) ) MAX_ROWS=250000 AVG_ROW_LENGTH=10240; ";
String createRevisionTable = "CREATE TABLE " + locale + "_revision (" + "rev_id int UNSIGNED NOT NULL AUTO_INCREMENT,"
+ "rev_page int(10) unsigned NOT NULL," + "rev_text_id int(10) unsigned NOT NULL,"
+ "rev_comment tinyblob NOT NULL," + "rev_user int(10) unsigned NOT NULL,"
+ "rev_user_text varchar(255) NOT NULL, " + "rev_timestamp binary(14) NOT NULL, "
+ "rev_minor_edit tinyint(3) unsigned NOT NULL," + " rev_deleted tinyint(3) unsigned NOT NULL,"
+ "rev_len int(10) unsigned NULL," + "rev_parent_id int(10) unsigned NULL,"
+ "KEY rev_user (rev_user),KEY rev_user_text (rev_user_text)," + "KEY rev_timestamp (rev_timestamp),"
+ "PRIMARY KEY rev_id (rev_id)) MAX_ROWS=250000 AVG_ROW_LENGTH=10240;";
// If database does not exist create it, if it exists delete it and create an empty one.
// System.out.println("Checking if the TABLE=text already exist.");
try {
rs = st.executeQuery("SHOW TABLES;");
} catch (Exception e) {
e.printStackTrace();
}
boolean resText = false, resPage = false, resRevision = false;
try {
while (rs.next()) {
String str = rs.getString(1);
if (str.contentEquals(locale + "_text"))
resText = true;
else if (str.contentEquals(locale + "_page"))
resPage = true;
else if (str.contentEquals(locale + "_revision"))
resRevision = true;
}
if (resText) {
System.out.println("TABLE = " + locale + "_text already exist deleting.");
boolean res0 = st.execute("DROP TABLE " + locale + "_text;");
}
if (resPage) {
System.out.println("TABLE = " + locale + "_page already exist deleting.");
boolean res0 = st.execute("DROP TABLE " + locale + "_page;");
}
if (resRevision) {
System.out.println("TABLE = " + locale + "_revision already exist deleting.");
boolean res0 = st.execute("DROP TABLE " + locale + "_revision;");
}
boolean res1;
int res2;
// creating TABLE=text
// System.out.println("\nCreating table:" + createTextTable);
System.out.println("\nCreating table:" + locale + "_text");
res1 = st.execute(createTextTable);
System.out.println("Loading sql file: " + textFile);
res2 = st.executeUpdate("LOAD DATA LOCAL INFILE '" + textFile + "' into table " + locale + "_text;");
System.out.println("TABLE = " + locale + "_text succesfully created.");
// creating TABLE=page
// System.out.println("\nCreating table:" + createPageTable);
System.out.println("\nCreating table:" + locale + "_page");
res1 = st.execute(createPageTable);
System.out.println("Loading sql file: " + pageFile);
res2 = st.executeUpdate("LOAD DATA LOCAL INFILE '" + pageFile + "' into table " + locale + "_page;");
System.out.println("TABLE = " + locale + "_page succesfully created.");
// creating TABLE=revision
// System.out.println("\n\nCreating table:" + createRevisionTable);
System.out.println("\nCreating table:" + locale + "_revision");
res1 = st.execute(createRevisionTable);
System.out.println("Loading sql file: " + revisionFile);
System.out.println("SOURCE " + revisionFile + ";");
res2 = st.executeUpdate("LOAD DATA LOCAL INFILE '" + revisionFile + "' into table " + locale + "_revision;");
System.out.println("TABLE = " + locale + "_revision succesfully created.");
} catch (SQLException e) {
e.printStackTrace();
}
}
/***
* This function creates empty text, page and revision tables (without locale prefix). If the tables already exist it will
* delete them.
*
* @return true if the tables were created succesfully, false otherwise.
*/
public boolean createEmptyWikipediaTables() {
boolean result = true;
System.out.println("Creating empty wikipedia tables: checking if tables text, page and revision already exist.");
String createTextTable = "CREATE TABLE text (" + " old_id int UNSIGNED NOT NULL AUTO_INCREMENT,"
+ " old_text mediumblob NOT NULL," + " old_flags tinyblob NOT NULL," + " PRIMARY KEY old_id (old_id)"
+ " ) MAX_ROWS=250000 AVG_ROW_LENGTH=10240 CHARACTER SET utf8;";
String createPageTable = "CREATE TABLE page (" + "page_id int UNSIGNED NOT NULL AUTO_INCREMENT,"
+ "page_namespace int(11) NOT NULL," + "page_title varchar(255) NOT NULL,"
+ "page_restrictions tinyblob NOT NULL," + "page_counter bigint(20) unsigned NOT NULL,"
+ "page_is_redirect tinyint(3) unsigned NOT NULL," + "page_is_new tinyint(3) unsigned NOT NULL,"
+ "page_random double unsigned NOT NULL," + "page_touched binary(14) NOT NULL,"
+ "page_latest int(10) unsigned NOT NULL," + "page_len int(10) unsigned NOT NULL,"
+ "PRIMARY KEY page_id (page_id)," + "KEY page_namespace (page_namespace)," + "KEY page_random (page_random),"
+ "KEY page_len (page_len) ) MAX_ROWS=250000 AVG_ROW_LENGTH=10240 CHARACTER SET utf8;";
String createRevisionTable = "CREATE TABLE revision (" + "rev_id int UNSIGNED NOT NULL AUTO_INCREMENT,"
+ "rev_page int(10) unsigned NOT NULL," + "rev_text_id int(10) unsigned NOT NULL,"
+ "rev_comment tinyblob NOT NULL," + "rev_user int(10) unsigned NOT NULL,"
+ "rev_user_text varchar(255) NOT NULL, " + "rev_timestamp binary(14) NOT NULL, "
+ "rev_minor_edit tinyint(3) unsigned NOT NULL," + " rev_deleted tinyint(3) unsigned NOT NULL,"
+ "rev_len int(10) unsigned NULL," + "rev_parent_id int(10) unsigned NULL,"
+ "KEY rev_user (rev_user),KEY rev_user_text (rev_user_text)," + "KEY rev_timestamp (rev_timestamp),"
+ "PRIMARY KEY rev_id (rev_id)) MAX_ROWS=250000 AVG_ROW_LENGTH=10240 CHARACTER SET utf8;";
// If database does not exist create it, if it exists delete it and create an empty one.
// System.out.println("Checking if the TABLE=text already exist.");
try {
rs = st.executeQuery("SHOW TABLES;");
} catch (Exception e) {
e.printStackTrace();
}
boolean resText = false, resPage = false, resRevision = false;
try {
while (rs.next()) {
String str = rs.getString(1);
if (str.contentEquals("text"))
resText = true;
else if (str.contentEquals("page"))
resPage = true;
else if (str.contentEquals("revision"))
resRevision = true;
}
boolean res0, res1;
if (resText && !askIfDeletingTable("text"))
result = false;
else if (resPage && !askIfDeletingTable("page"))
result = false;
else if (resRevision && !askIfDeletingTable("revision"))
result = false;
if (result) {
res0 = st.execute("DROP TABLE IF EXISTS text;");
System.out.println(" Creating table: text");
res1 = st.execute(createTextTable);
res0 = st.execute("DROP TABLE IF EXISTS page;");
System.out.println(" Creating table: page");
res1 = st.execute(createPageTable);
res0 = st.execute("DROP TABLE IF EXISTS revision;");
System.out.println(" Creating table: revision");
res1 = st.execute(createRevisionTable);
}
} catch (SQLException e) {
e.printStackTrace();
}
return result;
}
/****
* Rename the Wikipedia tables adding the prefix locale: locale_text locale_page and locale_revision. if any of the locale_*
* tables exist will be deleted before renaming the table.
*/
public void addLocalePrefixToWikipediaTables() {
System.out.println("Adding local prefix " + locale + " to tables text, page and revision, checking if "
+ "already exist tables with that prefix.");
try {
rs = st.executeQuery("SHOW TABLES;");
} catch (Exception e) {
e.printStackTrace();
}
boolean resText = false, resPage = false, resRevision = false;
boolean resLocaleText = false, resLocalePage = false, resLocaleRevision = false;
try {
while (rs.next()) {
String str = rs.getString(1);
if (str.contentEquals("text"))
resText = true;
else if (str.contentEquals(locale + "_text"))
resLocaleText = true;
else if (str.contentEquals("page"))
resPage = true;
else if (str.contentEquals(locale + "_page"))
resLocalePage = true;
else if (str.contentEquals("revision"))
resRevision = true;
else if (str.contentEquals(locale + "_revision"))
resLocaleRevision = true;
}
if (resLocaleText) {
System.out.println(" Deleting TABLE = " + locale + "_text.");
boolean res0 = st.execute("DROP TABLE " + locale + "_text;");
}
if (resLocalePage) {
System.out.println(" Deleting TABLE = " + locale + "_page.");
boolean res0 = st.execute("DROP TABLE " + locale + "_page;");
}
if (resLocaleRevision) {
System.out.println(" Deleting TABLE = " + locale + "_revision.");
boolean res0 = st.execute("DROP TABLE " + locale + "_revision;");
}
if (resText) {
System.out.println(" RENAME TABLE = text TO " + locale + "_text.");
boolean res0 = st.execute("RENAME TABLE text TO " + locale + "_text;");
}
if (resPage) {
System.out.println(" RENAME TABLE = page TO " + locale + "_page.");
boolean res0 = st.execute("RENAME TABLE page TO " + locale + "_page;");
}
if (resRevision) {
System.out.println(" RENAME TABLE = revision TO " + locale + "_revision.");
boolean res0 = st.execute("RENAME TABLE revision TO " + locale + "_revision;");
}
} catch (SQLException e) {
e.printStackTrace();
}
}
/****
* Delete the Wikipedia tables: locale_text, locale_page and locale_revision tables.
*
*/
public void deleteWikipediaTables() {
System.out.println("Deleting already used wikipedia tables.");
try {
rs = st.executeQuery("SHOW TABLES;");
} catch (Exception e) {
e.printStackTrace();
}
boolean resText = false, resPage = false, resRevision = false;
try {
while (rs.next()) {
String str = rs.getString(1);
if (str.contentEquals(locale + "_text"))
resText = true;
else if (str.contentEquals(locale + "_page"))
resPage = true;
else if (str.contentEquals(locale + "_revision"))
resRevision = true;
}
if (resText) {
System.out.println(" Deleting TABLE = " + locale + "_text.");
boolean res0 = st.execute("DROP TABLE " + locale + "_text;");
}
if (resPage) {
System.out.println(" Deleting TABLE = " + locale + "_page.");
boolean res0 = st.execute("DROP TABLE " + locale + "_page;");
}
if (resRevision) {
System.out.println(" Deleting TABLE = " + locale + "_revision.");
boolean res0 = st.execute("DROP TABLE " + locale + "_revision;");
}
} catch (SQLException e) {
e.printStackTrace();
}
}
/***
* check if tables: locale_text, locale_page and locale_revision exist.
*
* @return resText && resPage && resRevision
*/
public boolean checkWikipediaTables() {
// wiki must be already created
// If database does not exist create it, if it exists delete it and create an empty one.
System.out.println("Checking if the TABLE=" + locale + "_text already exist.");
try {
rs = st.executeQuery("SHOW TABLES;");
} catch (Exception e) {
e.printStackTrace();
}
boolean resText = false, resPage = false, resRevision = false;
try {
while (rs.next()) {
String str = rs.getString(1);
if (str.contentEquals(locale + "_text"))
resText = true;
else if (str.contentEquals(locale + "_page"))
resPage = true;
else if (str.contentEquals(locale + "_revision"))
resRevision = true;
}
if (resText)
System.out.println("TABLE =" + locale + "_text already exist.");
if (resPage)
System.out.println("TABLE =" + locale + "_page already exist.");
if (resRevision)
System.out.println("TABLE =" + locale + "_revision already exist.");
} catch (SQLException e) {
e.printStackTrace();
}
return resText && resPage && resRevision;
}
public void createWikipediaCleanTextTable() {
// wiki must be already created
// String creteWiki = "CREATE DATABASE wiki;";
String createCleanTextTable = "CREATE TABLE " + cleanTextTableName + " (" + " id int UNSIGNED NOT NULL AUTO_INCREMENT,"
+ " cleanText MEDIUMBLOB NOT NULL," + " processed BOOLEAN, " + " page_id int UNSIGNED NOT NULL, "
+ " text_id int UNSIGNED NOT NULL, " + " PRIMARY KEY id (id)"
+ " ) MAX_ROWS=250000 AVG_ROW_LENGTH=10240 CHARACTER SET utf8;";
// If database does not exist create it, if it exists delete it and create an empty one.
System.out.println("Checking if the TABLE=" + cleanTextTableName + " already exist.");
try {
rs = st.executeQuery("SHOW TABLES;");
} catch (Exception e) {
e.printStackTrace();
}
boolean resText = false;
try {
while (rs.next()) {
String str = rs.getString(1);
if (str.contentEquals(cleanTextTableName))
resText = true;
}
if (resText) {
System.out.println("TABLE = " + cleanTextTableName + " already exist deleting.");
boolean res0 = st.execute("DROP TABLE " + cleanTextTableName + ";");
}
boolean res1;
int res2;
// creating TABLE=cleanText
// System.out.println("\nCreating table:" + createCleanTextTable);
System.out.println("\nCreating table:" + cleanTextTableName);
res1 = st.execute(createCleanTextTable);
System.out.println("TABLE = " + cleanTextTableName + " succesfully created.");
} catch (SQLException e) {
e.printStackTrace();
}
}
/***
*
* @return true if TABLE=tableName exist.
* @param tableName
* tableName
*/
public boolean tableExist(String tableName) {
// System.out.println(" Checking if the TABLE=" + tableName + " exist.");
try {
rs = st.executeQuery("SHOW TABLES;");
} catch (Exception e) {
e.printStackTrace();
}
boolean res = false;
try {
while (rs.next()) {
String str = rs.getString(1);
if (str.contentEquals(tableName))
res = true;
}
} catch (SQLException e) {
e.printStackTrace();
}
return res;
}
/***
* Get a list of ids from field in table.
*
* @param field
* field
* @param table
* table
* @return idSet
*/
public String[] getIds(String field, String table) {
int num, i, j;
String idSet[] = null;
String str = queryTable("SELECT count(" + field + ") FROM " + table + ";");
num = Integer.parseInt(str);
idSet = new String[num];
try {
rs = st.executeQuery("SELECT " + field + " FROM " + table + ";");
} catch (Exception e) {
e.printStackTrace();
}
try {
i = 0;
while (rs.next()) {
idSet[i] = rs.getString(1);
i++;
}
} catch (SQLException e) {
e.printStackTrace();
}
return idSet;
}
/***
* This function will select just the unprocessed cleanText records.
*
* @return idSet
*/
public int[] getUnprocessedTextIds() {
int num, i, j;
int idSet[] = null;
String str = queryTable("select count(id) from " + cleanTextTableName + " where processed=false;");
num = Integer.parseInt(str);
idSet = new int[num];
try {
rs = st.executeQuery("select id from " + cleanTextTableName + " where processed=false;");
} catch (Exception e) {
e.printStackTrace();
}
try {
i = 0;
while (rs.next()) {
idSet[i] = rs.getInt(1);
i++;
}
} catch (SQLException e) {
e.printStackTrace();
}
return idSet;
}
/***
* Get the list of tables for this locale
*
* @return ArrayList<String>
*/
public ArrayList getListOfTables() {
ArrayList tablesList = new ArrayList();
try {
rs = st.executeQuery("show tables like '" + locale + "%';");
} catch (Exception e) {
e.printStackTrace();
}
try {
while (rs.next())
tablesList.add(rs.getString(1));
} catch (SQLException e) {
e.printStackTrace();
}
return tablesList;
}
public void setDBTable(String table) {
currentTable = table;
}
public void setWordListTable(String table) {
wordListTableName = table;
}
public void insertCleanText(String text, String page_id, String text_id) {
// System.out.println("inserting in cleanText: ");
byte cleanText[] = null;
try {
cleanText = text.getBytes("UTF8");
} catch (Exception e) { // UnsupportedEncodedException
e.printStackTrace();
}
try {
// ps = cn.prepareStatement("INSERT INTO cleanText VALUES (null, ?, ?, ?, ?)");
if (cleanText != null) {
psCleanText.setBytes(1, cleanText);
psCleanText.setBoolean(2, false); // it will be true after processed by the FeatureMaker
psCleanText.setInt(3, Integer.parseInt(page_id));
psCleanText.setInt(4, Integer.parseInt(text_id));
psCleanText.execute();
psCleanText.clearParameters();
} else
System.out.println("WARNING: can not insert in " + cleanTextTableName + ": " + text);
} catch (SQLException e) {
e.printStackTrace();
}
}
/****
* Insert processed sentence in dbselection
*
* @param sentence
* text of the sentence.
* @param features
* features if sentences is reliable.
* @param reliable
* true/false.
* @param unknownWords
* true/false.
* @param strangeSymbols
* true/false.
* @param cleanText_id
* the id of the cleanText this sentence comes from.
*/
public void insertSentence(String sentence, byte features[], boolean reliable, boolean unknownWords, boolean strangeSymbols,
int cleanText_id) {
byte strByte[] = null;
try {
strByte = sentence.getBytes("UTF8");
} catch (Exception e) { // UnsupportedEncodedException
e.printStackTrace();
}
try {
psSentence.setBytes(1, strByte);
psSentence.setBytes(2, features);
psSentence.setBoolean(3, reliable);
psSentence.setBoolean(4, unknownWords);
psSentence.setBoolean(5, strangeSymbols);
psSentence.setBoolean(6, false);
psSentence.setBoolean(7, false);
psSentence.setInt(8, cleanText_id);
psSentence.execute();
psSentence.clearParameters();
} catch (SQLException e) {
e.printStackTrace();
}
}
/***
* With the dbselection_id get first the sentence and then insert it in the locale_selectedSentences table.
*
* @param dbselection_id
* dbselection_id
* @param unwanted
* unwanted
*/
public void insertSelectedSentence(int dbselection_id, boolean unwanted) {
String dbQuery = "Select sentence FROM " + dbselectionTableName + " WHERE id=" + dbselection_id;
byte[] sentenceBytes = null;
try {
// First get the sentence
sentenceBytes = queryTableByte(dbQuery);
psSelectedSentence.setBytes(1, sentenceBytes);
psSelectedSentence.setBoolean(2, unwanted);
psSelectedSentence.setInt(3, dbselection_id);
psSelectedSentence.execute();
psSelectedSentence.clearParameters();
} catch (SQLException e) {
e.printStackTrace();
}
}
/****
* Creates a wordList table, if already exists deletes it and creates a new to insert current wordList.
*
* @param wordList
* wordList
*/
public void insertWordList(HashMap wordList) {
String word;
Integer value;
boolean res;
byte wordByte[];
String wordListTable = "CREATE TABLE " + wordListTableName + " ( id INT NOT NULL AUTO_INCREMENT, "
+ "word TINYBLOB NOT NULL, " + "frequency INT UNSIGNED NOT NULL, " + "primary key(id)) CHARACTER SET utf8;";
try {
System.out.println("Inserting wordList in DB...");
// if wordList table already exist it should be deleted before inserting this list
if (tableExist(wordListTableName)) {
res = st.execute("DROP TABLE " + wordListTableName + ";");
res = st.execute(wordListTable);
} else
res = st.execute(wordListTable);
try {
Iterator iteratorSorted = wordList.keySet().iterator();
int count = 0;
cn.setAutoCommit(false);
while (iteratorSorted.hasNext()) {
word = iteratorSorted.next().toString();
value = wordList.get(word);
wordByte = null;
wordByte = word.getBytes("UTF8");
psWord.setBytes(1, wordByte);
psWord.setInt(2, value);
psWord.addBatch();
if (count++ == 1000) {
psWord.executeBatch();
cn.commit();
count = 0;
System.out.println("Adding batch.");
}
psWord.clearParameters();
}
psWord.executeBatch(); // the leftovers.
cn.commit();
cn.setAutoCommit(true);
} catch (Exception e) { // UnsupportedEncodedException
e.printStackTrace();
}
System.out.println("Inserted new words in " + wordListTableName + " table.");
} catch (SQLException e) {
e.printStackTrace();
}
}
public void closeDBConnection() {
try {
cn.close();
System.out.println("\nMysql connection closed.");
} catch (SQLException e) {
e.printStackTrace();
}
}
public int getNumberOfReliableSentences() {
String dbQuery = "SELECT count(sentence) FROM " + dbselectionTableName + " where reliable=true;";
String str = queryTable(dbQuery);
return Integer.parseInt(str);
}
/***
* Get a list of id's
*
* @param table
* cleanText, wordList, dbselection (no need to add locale) (NOTE: this function does not work for the
* selectedSentences table, for this table use the function getIdListOfSelectedSentences ).
* @param condition
* reliable, unknownWords, strangeSymbols, selected, unwanted = true/false (combined are posible:
* "reliable=true and unwanted=false"); or condition=null for querying without condition.
* @return int array or null if the list of id's is empty.
*/
public int[] getIdListOfType(String table, String condition) {
int num, i, j;
int idSet[] = null;
int maxNum = 500000;
String getNum, getIds, getIdsShort;
if (condition != null) {
getNum = "SELECT count(id) FROM " + locale + "_" + table + " where " + condition + ";";
getIds = "SELECT id FROM " + locale + "_" + table + " where " + condition;
} else {
getNum = "SELECT count(id) FROM " + locale + "_" + table + ";";
getIds = "SELECT id FROM " + locale + "_" + table;
}
String str = queryTable(getNum);
num = Integer.parseInt(str);
// System.out.println("num = " + num);
if (num > 0) {
idSet = new int[num];
i = 0;
if (num > maxNum) {
for (j = 0; j < num; j += maxNum) {
try {
getIdsShort = getIds + " limit " + j + "," + maxNum;
// System.out.println("getIdsShort=" + getIdsShort);
rs = st.executeQuery(getIdsShort);
while (rs.next()) {
idSet[i] = rs.getInt(1);
i++;
}
System.out.println(" Num of ids retrieved = " + i);
rs.close();
} catch (SQLException e) {
e.printStackTrace();
}
}
} else { // if num < maxNum
try {
rs = st.executeQuery(getIds);
while (rs.next()) {
idSet[i] = rs.getInt(1);
i++;
}
} catch (SQLException e) {
e.printStackTrace();
}
}
} else
System.out.println("WARNING empty list for: " + getIds);
// System.out.println("idSet.length=" + idSet.length);
return idSet;
}
/**
* For the set of sentences identified by table and condition, retrieve from Mysql both the sentence ids and the corresponding
* features.
*
* @param table
* table
* @param condition
* condition
* @return Pair<int[], byte[][]>(idSet, features)
*/
public Pair getIdsAndFeatureVectors(String table, String condition) {
int num, i, j;
int idSet[] = null;
byte features[][] = null;
int maxNum = 500000;
String getNum, getIds, getIdsShort;
if (condition != null) {
getNum = "SELECT count(id) FROM " + locale + "_" + table + " where " + condition + ";";
getIds = "SELECT id,features FROM " + locale + "_" + table + " where " + condition;
} else {
getNum = "SELECT count(id) FROM " + locale + "_" + table + ";";
getIds = "SELECT id,features FROM " + locale + "_" + table;
}
String str = queryTable(getNum);
num = Integer.parseInt(str);
System.out.println(num + " sentences to retrieve...");
// System.out.println("num = " + num);
if (num > 0) {
idSet = new int[num];
features = new byte[num][];
i = 0;
if (num > maxNum) {
for (j = 0; j < num; j += maxNum) {
try {
getIdsShort = getIds + " limit " + j + "," + maxNum;
rs = st.executeQuery(getIdsShort);
while (rs.next()) {
idSet[i] = rs.getInt(1);
features[i] = rs.getBytes(2);
i++;
}
System.out.println(" Num of ids+features retrieved = " + i);
rs.close();
} catch (SQLException e) {
e.printStackTrace();
}
}
} else { // if num < maxNum
try {
rs = st.executeQuery(getIds);
while (rs.next()) {
idSet[i] = rs.getInt(1);
features[i] = rs.getBytes(2);
i++;
}
} catch (SQLException e) {
e.printStackTrace();
}
}
} else
System.out.println("WARNING empty list for: " + getIds);
// System.out.println("idSet.length=" + idSet.length);
return new Pair(idSet, features);
}
/***
* Get a list of id's from a selected sentences table.
* NOTE: use the actual table name: local + tableName + selectedsentences
*
*
*
* @param actualTableName
* = locale_tableName_selectedSentences
* @param condition
* unwanted=true/false
* @return idSet
*/
public int[] getIdListOfSelectedSentences(String actualTableName, String condition) {
int num, i, j;
int idSet[] = null;
String getNum, getIds;
// String actualTableName = lang + "_" + tableName + "_selectedSentences";
getNum = "SELECT count(dbselection_id) FROM " + actualTableName + " where " + condition + ";";
getIds = "SELECT dbselection_id FROM " + actualTableName + " where " + condition + ";";
String str = queryTable(getNum);
num = Integer.parseInt(str);
if (num > 0) {
idSet = new int[num];
try {
rs = st.executeQuery(getIds);
} catch (Exception e) {
e.printStackTrace();
}
try {
i = 0;
while (rs.next()) {
idSet[i] = rs.getInt(1);
i++;
}
} catch (SQLException e) {
e.printStackTrace();
}
} else
System.out.println("WARNING empty list for: " + getIds);
return idSet;
}
/***
* Get number of words in the wordList table.
*
* @return int number of words.
* @param maxFrequency
* max frequency of a word to be considered in the list, if maxFrequency=0 it will retrieve all the words with
* frequency≥1.
*/
public int getNumberOfWords(int maxFrequency) {
String where = "";
if (maxFrequency > 0)
where = "where frequency > " + maxFrequency;
String dbQuery = "SELECT count(word) FROM " + wordListTableName + " " + where + ";";
String str = queryTable(dbQuery);
return Integer.parseInt(str);
}
/****
* Get the most frequent words and its frequency in a HashMap.
*
* @param numWords
* max number of words to retrieve, if numWords=0 then it will retrieve all the words in the list in descending
* order of frequency.
* @param maxFrequency
* max frequency of a word to be considered in the list, if maxFrequency=0 it will retrieve all the words with
* frequency≥1.
* @return wordList
*/
public HashMap getMostFrequentWords(int numWords, int maxFrequency) {
HashMap wordList;
String dbQuery, where = "", word;
int initialCapacity = 200000;
byte wordBytes[];
if (maxFrequency > 0)
where = "where frequency > " + maxFrequency;
if (numWords > 0) {
dbQuery = "SELECT word,frequency FROM " + wordListTableName + " " + where + " order by frequency desc limit "
+ numWords + ";";
wordList = new HashMap(numWords);
} else {
dbQuery = "SELECT word,frequency FROM " + wordListTableName + " " + where + " order by frequency desc";
wordList = new HashMap(initialCapacity);
}
try {
rs = st.executeQuery(dbQuery);
} catch (Exception e) {
e.printStackTrace();
}
try {
while (rs.next()) {
wordBytes = rs.getBytes(1);
word = new String(wordBytes, "UTF8");
wordList.put(word, new Integer(rs.getInt(2)));
}
} catch (SQLException e) {
e.printStackTrace();
} catch (Exception e) { // catch unsupported encoding exception
e.printStackTrace();
}
return wordList;
}
/****
* Get the most frequent words sorted by frequency (descendent) in an ArrayList.
*
* @param numWords
* max number of words to retrieve, if numWords=0 then it will retrieve all the words in the list in descending
* order of frequency.
* @param maxFrequency
* max frequency of a word to be considered in the list, if maxFrequency=0 it will retrieve all the words with
* frequency≥1.
* @return words
*/
public ArrayList getMostFrequentWordsArray(int numWords, int maxFrequency) {
ArrayList words = new ArrayList();
;
String dbQuery, where = "", word;
int initialCapacity = 200000;
byte wordBytes[];
if (maxFrequency > 0)
where = "where frequency > " + maxFrequency;
if (numWords > 0)
dbQuery = "SELECT word,frequency FROM " + wordListTableName + " " + where + " order by frequency desc limit "
+ numWords + ";";
else
dbQuery = "SELECT word,frequency FROM " + wordListTableName + " " + where + " order by frequency desc";
try {
rs = st.executeQuery(dbQuery);
} catch (Exception e) {
e.printStackTrace();
}
try {
while (rs.next()) {
wordBytes = rs.getBytes(1);
word = new String(wordBytes, "UTF8");
words.add(word);
}
} catch (SQLException e) {
e.printStackTrace();
} catch (Exception e) { // catch unsupported encoding exception
e.printStackTrace();
}
return words;
}
/****
*
* @param fileName
* file to write the list
* @param order
* word or frequency
* @param numWords
* max number of words, if numWords=0 then it will retrieve all the words in the list.
* @param maxFrequency
* max frequency of a word to be considered in the list, if maxFrequency=0 it will retrieve all the words with
* frequency≥1.
*/
public void printWordList(String fileName, String order, int numWords, int maxFrequency) {
PrintWriter pw;
String dbQuery, where = "";
String orderBy;
byte wordBytes[];
String word;
if (maxFrequency > 0)
where = "where frequency > " + maxFrequency;
if (order.contentEquals("word"))
orderBy = "word asc";
else
orderBy = "frequency desc";
if (numWords > 0)
dbQuery = "SELECT word,frequency from " + wordListTableName + " " + where + " order by " + orderBy + " limit "
+ numWords + ";";
else
dbQuery = "SELECT word,frequency from " + wordListTableName + " " + where + " order by " + orderBy;
try {
rs = st.executeQuery(dbQuery);
} catch (Exception e) {
e.printStackTrace();
}
try {
pw = new PrintWriter(new OutputStreamWriter(new FileOutputStream(new File(fileName)), "UTF-8"));
wordBytes = null;
while (rs.next()) {
wordBytes = rs.getBytes(1);
word = new String(wordBytes, "UTF8");
pw.println(word + " " + rs.getInt(2));
}
pw.close();
} catch (SQLException e) {
e.printStackTrace();
} catch (Exception e) { // catch unsupported encoding exception
e.printStackTrace();
}
System.out.println(wordListTableName + " printed in file: " + fileName + " ordered by " + order);
}
/***
* Get a sentence from a locale_dbselection table.
*
* @param id
* dbselection (no need to add locale)
* @return String sentence
*/
public String getDBSelectionSentence(int id) {
String sentence = "";
String dbQuery = "Select sentence FROM " + dbselectionTableName + " WHERE id=" + id;
byte[] sentenceBytes = null;
sentenceBytes = queryTableByte(dbQuery);
try {
sentence = new String(sentenceBytes, "UTF8");
// System.out.println(" TEXT: " + text);
} catch (Exception e) { // UnsupportedEncodedException
e.printStackTrace();
}
return sentence;
}
/**
* Get a
*
* @param tableName
* tableName
* @param id
* id
* @return sentence
*/
public String getSelectedSentence(String tableName, int id) {
String sentence = "";
String dbQuery = "Select sentence FROM " + tableName + " WHERE dbselection_id=" + id;
byte[] sentenceBytes = null;
sentenceBytes = queryTableByte(dbQuery);
try {
sentence = new String(sentenceBytes, "UTF8");
// System.out.println(" TEXT: " + text);
} catch (Exception e) { // UnsupportedEncodedException
e.printStackTrace();
}
return sentence;
}
// Firts filtering:
// get first the page_title and check if it is not Image: or Wikipedia:Votes_for_deletion/
// maybe we can check also the length
public String getTextFromWikiPage(String id, int minPageLength, StringBuilder old_id, PrintWriter pw) {
String pageTitle, pageLen, dbQuery, textId, text = null;
byte[] textBytes = null;
int len;
dbQuery = "Select page_title FROM " + locale + "_page WHERE page_id=" + id;
pageTitle = queryTable(dbQuery);
dbQuery = "Select page_len FROM " + locale + "_page WHERE page_id=" + id;
pageLen = queryTable(dbQuery);
len = Integer.parseInt(pageLen);
if (len < minPageLength || pageTitle.contains("Wikipedia:") || pageTitle.contains("Image:")
|| pageTitle.contains("Template:") || pageTitle.contains("Category:") || pageTitle.contains("List_of_")) {
// System.out.println("PAGE NOT USED page title=" + pageTitle + " Len=" + len);
/*
* dbQuery = "select rev_text_id from revision where rev_page=" + id; textId = queryTable(dbQuery); dbQuery =
* "select old_text from text where old_id=" + textId; text = queryTable(dbQuery); System.out.println("TEXT: " +
* text);
*/
} else {
// System.out.println("PAGE page_id=" + id + " PAGE SELECTED page title=" + pageTitle + " Len=" + len);
if (pw != null)
pw.println("\nSELECTED PAGE TITLE=" + pageTitle + " Len=" + len);
dbQuery = "select rev_text_id from " + locale + "_revision where rev_page=" + id;
textId = queryTable(dbQuery);
old_id.delete(0, old_id.length());
old_id.insert(0, textId);
dbQuery = "select old_text from " + locale + "_text where old_id=" + textId;
textBytes = queryTableByte(dbQuery);
try {
text = new String(textBytes, "UTF8");
// System.out.println(" TEXT: " + text);
} catch (Exception e) { // UnsupportedEncodedException
e.printStackTrace();
}
}
return text;
}
public String getCleanText(int id) {
String dbQuery, text = null;
byte[] textBytes = null;
dbQuery = " select cleanText from " + cleanTextTableName + " where id=" + id;
textBytes = queryTableByte(dbQuery);
try {
text = new String(textBytes, "UTF8");
// System.out.println(" TEXT: " + text);
} catch (Exception e) { // UnsupportedEncodedException
e.printStackTrace();
}
// once retrieved the text record mark it as processed
updateTable("UPDATE " + cleanTextTableName + " SET processed=true WHERE id=" + id);
return text;
}
/***
* Set a sentence record field as true/false in dbselection table.
*
* @param id
* id
* @param field
* reliable, unknownWords, strangeSymbols, selected or unwanted = true/false
* @param fieldValue
* true/false (as string)
*/
public void setSentenceRecord(int id, String field, boolean fieldValue) {
String bval;
if (fieldValue)
bval = "true";
else
bval = "false";
updateTable("UPDATE " + dbselectionTableName + " SET " + field + "=" + bval + " WHERE id=" + id);
}
/***
* This function updates the unwanted field as true/false of dbselection TABLE and selectedSentencesTable TABLE.
* NOTE: use the actual table name: local + tableName + selectedsentences
*
* @param actualTableName
* including local and _selectedSentences
* @param id
* id in dbselection table
* @param fieldValue
* true/false
*/
public void setUnwantedSentenceRecord(String actualTableName, int id, boolean fieldValue) {
String bval;
if (fieldValue)
bval = "true";
else
bval = "false";
updateTable("UPDATE " + actualTableName + " SET unwanted=" + bval + " WHERE dbselection_id=" + id);
updateTable("UPDATE " + dbselectionTableName + " SET unwanted=" + bval + " WHERE id=" + id);
}
/***
* Set a description for table = name, it checks if the table tablesDescription exist, if not it creates it.
*
* @param tableName
* the name of the table, it can not be null
* @param description
* if no description set to null
* @param stopCriterion
* if no stopCriterion set to null
* @param featuresDefinitionFileName
* if no featuresDefinitionFileName set to null
* @param covDefConfigFileName
* if no covDefConfigFileNamen set to null
*/
public void setTableDescription(String tableName, String description, String stopCriterion,
String featuresDefinitionFileName, String covDefConfigFileName) {
boolean descExists = false;
int val = 0;
if (tableName != null) {
// check if tablesDescription exists
if (tableExist("tablesDescription")) {
// check if a description for that name already exist
try {
rs = st.executeQuery("SELECT id from tablesDescription where name='" + tableName + "';");
while (rs.next()) {
val = rs.getInt(1);
if (val > 0)
descExists = true;
}
} catch (SQLException e) {
e.printStackTrace();
}
} else
createTablesDescriptionTable();
if (!descExists) {
try {
System.out.println(" Adding a description for the table " + tableName + " in TABLE = tablesDescription.");
psTablesDescription.setString(1, tableName);
if (description != null)
psTablesDescription.setString(2, description);
else
psTablesDescription.setString(2, "");
if (stopCriterion != null)
psTablesDescription.setString(3, stopCriterion);
else
psTablesDescription.setString(3, "");
// get the file and the content of the file
if (featuresDefinitionFileName != null) {
psTablesDescription.setString(4, featuresDefinitionFileName);
String str = "", features = "";
try {
BufferedReader in = new BufferedReader(new FileReader(featuresDefinitionFileName));
while ((str = in.readLine()) != null)
features += str + "\n";
in.close();
} catch (IOException e) {
}
psTablesDescription.setString(5, features);
} else {
psTablesDescription.setString(4, "");
psTablesDescription.setString(5, "");
}
// get the file and the content of the file
if (covDefConfigFileName != null) {
psTablesDescription.setString(6, covDefConfigFileName);
String str = "", config = "";
try {
BufferedReader in = new BufferedReader(new FileReader(covDefConfigFileName));
while ((str = in.readLine()) != null)
config += str + "\n";
in.close();
} catch (IOException e) {
}
psTablesDescription.setString(7, config);
} else {
psTablesDescription.setString(6, "");
psTablesDescription.setString(7, "");
}
psTablesDescription.execute();
psTablesDescription.clearParameters();
} catch (SQLException e) {
e.printStackTrace();
}
} else
// if a description for this name already exist
System.out.println(" A description for the table " + tableName + " already exist in TABLE = tablesDescription.");
} else
// tableName can not be null
System.out.println(" Error setting table description: tableName can not be null");
}
/***
* Get the description of the tableName
*
* @param tableName
* tableName
* @return and String array where: desc[0] tableName desc[1] description desc[2] stopCriterion desc[3]
* featuresDefinitionFileName desc[4] featuresDefinitionFile desc[5] covDefConfigFileName desc[6] covDefConfigFile
*/
public String[] getTableDescription(String tableName) {
String[] desc = new String[7];
PreparedStatement psDesc = null;
try {
psDesc = cn.prepareStatement("SELECT * from tablesDescription where name='" + tableName + "';");
rs = psDesc.executeQuery();
while (rs.next()) {
for (int i = 2; i < 9; i++) {
desc[(i - 2)] = rs.getString(i); // the id is not returned
// System.out.println("desc[" + i + "]=" + desc[(i-2)]);
}
}
psDesc.close();
} catch (SQLException e) {
e.printStackTrace();
}
return desc;
}
private boolean updateTable(String sql) {
String str = "";
boolean res = false;
try {
res = st.execute(sql);
} catch (Exception e) {
e.printStackTrace();
}
return res;
}
private String queryTable(String dbQuery) {
String str = "";
// String dbQuery = "Select * FROM " + currentTable;
// System.out.println("querying: " + dbQuery);
try {
rs = st.executeQuery(dbQuery);
} catch (Exception e) {
e.printStackTrace();
}
try {
while (rs.next()) {
// String url = rs.getString(2);
// str = rs.getString(field);
str = rs.getString(1);
}
} catch (SQLException e) {
e.printStackTrace();
}
return str;
}
private byte[] queryTableByte(String dbQuery) {
byte strBytes[] = null;
// String dbQuery = "Select * FROM " + currentTable;
// System.out.println("querying: " + dbQuery);
try {
rs = st.executeQuery(dbQuery);
} catch (Exception e) {
e.printStackTrace();
}
try {
while (rs.next()) {
// String url = rs.getString(2);
// str = rs.getString(field);
// str = rs.getString(1);
strBytes = rs.getBytes(1);
}
} catch (Exception e) {
e.printStackTrace();
}
return strBytes;
}
public byte[] getFeatures(int id) {
byte[] fea = null;
String dbQuery = "Select features FROM " + dbselectionTableName + " WHERE id=" + id;
// System.out.println("querying: " + dbQuery);
try {
rs = st.executeQuery(dbQuery);
} catch (Exception e) {
e.printStackTrace();
}
try {
while (rs.next()) {
fea = rs.getBytes(1);
}
} catch (SQLException e) {
e.printStackTrace();
}
return fea;
}
/**
* Bulk load a set of features as identified by their IDs.
*
* @param ids
* a sorted array of feature IDs.
* @return an array of coverage features, of the same length as the input array.
*/
public byte[][] getFeaturesBulk(int[] ids) {
HashMap featuresSet = getFeaturesSet(0, ids.length - 1, ids);
byte[][] data = new byte[ids.length][];
for (int i = 0; i < ids.length; i++) {
data[i] = featuresSet.get(ids[i]);
if (data[i] == null) {
throw new NullPointerException("Could not get features for sentence ID " + ids[i]);
}
}
return data;
}
public HashMap getFeaturesSet(int ini, int end, int[] idList) {
int id;
int iniId = idList[ini];
int endId = idList[end];
byte[] f;
PreparedStatement psFeaturesSet = null;
boolean IdInRange = iniId > 0 && endId > 0;
int initialCapacity = IdInRange ? endId - iniId : end - ini;
HashMap feas = new HashMap(initialCapacity);
try {
if (IdInRange) {
psFeaturesSet = cn.prepareStatement("SELECT id,features FROM " + dbselectionTableName
+ " WHERE reliable=true and selected=false and unwanted=false and id>=? and id<=?");
psFeaturesSet.setInt(1, iniId);
psFeaturesSet.setInt(2, endId);
rs = psFeaturesSet.executeQuery();
while (rs.next()) {
id = rs.getInt(1);
f = rs.getBytes(2);
feas.put(id, f);
// System .out.println("adding id=" + id);
}
} else { // one or both ids are negative so we need to retrieve one by one
System.out.println("getFeaturesSet: negative indexes retrieving the features one by one....");
psFeaturesSet = cn.prepareStatement("Select features FROM " + dbselectionTableName + " WHERE id=?");
for (int i = ini; i <= end; i++) {
if (idList[i] > 0) {
try {
psFeaturesSet.setInt(1, idList[i]);
rs = psFeaturesSet.executeQuery();
while (rs.next()) {
f = rs.getBytes(1);
feas.put(idList[i], f);
// System .out.println("adding id=" + id);
}
} catch (SQLException e) {
e.printStackTrace();
}
}
} // end for loop
} // end else, the indexes are negative
} catch (SQLException e) {
e.printStackTrace();
} finally {
FileUtils.close(psFeaturesSet);
}
return feas;
}
/**
* The following characteres should be escaped: \0 An ASCII 0 (NUL) character. \' A single quote (“'”) character.
* \" A double quote (“"”) character.
*
* @param str
* str
* @return str
*/
public String mysqlEscapeCharacters(String str) {
str = str.replace("\0", "");
str = str.replace("'", "\'");
str = str.replace("\"", "\\\"");
return str;
}
public static void main(String[] args) throws Exception {
DBHandler wikiDB = new DBHandler("es");
wikiDB.createDBConnection(args[0], args[1], args[2], args[3]);
int numWords = wikiDB.getNumberOfWords(0);
System.out.println("numWords=" + numWords);
// wikiDB.printWordList("./tmp.txt", "frequency", 0, 0);
/*
* ArrayList w = new ArrayList(); HashMap wordList = wikiDB.getMostFrequentWords(0, 0,
* w);
*
* for(int i=0; i w = wikiDB.getMostFrequentWordsArray(0, 0);
for (int i = 0; i < w.size(); i++)
System.out.println(w.get(i));
wikiDB.closeDBConnection();
}
}
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