dev.ikm.tinkar.reasoner.elkowl.ElkOwlData Maven / Gradle / Ivy
/*
* Copyright © 2015 Integrated Knowledge Management ([email protected])
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package dev.ikm.tinkar.reasoner.elkowl;
import java.nio.file.Files;
import java.nio.file.Path;
import java.util.concurrent.ConcurrentHashMap;
import java.util.concurrent.atomic.AtomicInteger;
import org.eclipse.collections.api.list.ImmutableList;
import org.eclipse.collections.api.list.primitive.ImmutableIntList;
import org.semanticweb.owlapi.model.OWLAxiom;
import org.semanticweb.owlapi.model.OWLClass;
import org.semanticweb.owlapi.model.OWLDataFactory;
import org.semanticweb.owlapi.model.OWLObjectProperty;
import dev.ikm.tinkar.collection.SpinedIntObjectMap;
import dev.ikm.tinkar.common.service.PrimitiveData;
import dev.ikm.tinkar.common.sets.ConcurrentHashSet;
public class ElkOwlData {
public final SpinedIntObjectMap> nidAxiomsMap = new SpinedIntObjectMap<>();
public final ConcurrentHashSet axiomsSet = new ConcurrentHashSet<>();
public final ConcurrentHashMap nidConceptMap = new ConcurrentHashMap<>();
public final ConcurrentHashMap nidRoleMap = new ConcurrentHashMap<>();
public final AtomicInteger processedSemantics = new AtomicInteger();
private final AtomicInteger activeConceptCount = new AtomicInteger();
private final AtomicInteger inactiveConceptCount = new AtomicInteger();
public ImmutableIntList classificationConceptSet = null;
private OWLDataFactory dataFactory;
public int getActiveConceptCount() {
return activeConceptCount.get();
}
public int incrementActiveConceptCount() {
return activeConceptCount.incrementAndGet();
}
public int getInactiveConceptCount() {
return inactiveConceptCount.get();
}
public int incrementInactiveConceptCount() {
return inactiveConceptCount.incrementAndGet();
}
public ElkOwlData(OWLDataFactory dataFactory) {
this.dataFactory = dataFactory;
}
private OWLObjectProperty getOwlObjectProperty(int id) {
return dataFactory.getOWLObjectProperty(":" + id, ElkOwlPrefixManager.getPrefixManager());
}
private OWLClass getOwlClass(int id) {
return dataFactory.getOWLClass(":" + id, ElkOwlPrefixManager.getPrefixManager());
}
public OWLObjectProperty getRole(int roleNid) {
return this.nidRoleMap.computeIfAbsent(roleNid, this::getOwlObjectProperty);
}
public OWLClass getConcept(int conceptNid) {
return this.nidConceptMap.computeIfAbsent(conceptNid, this::getOwlClass);
}
public void writeConcepts(Path path) throws Exception {
Files.write(path, nidConceptMap.keySet().stream() //
.map(key -> PrimitiveData.publicId(key).asUuidArray()[0] + "\t" + PrimitiveData.text(key)) //
.sorted() //
.toList());
}
public void writeRoles(Path path) throws Exception {
Files.write(path, nidRoleMap.keySet().stream() //
.map(key -> PrimitiveData.publicId(key).asUuidArray()[0] + "\t" + PrimitiveData.text(key)) //
.sorted() //
.toList());
}
public void writeAxioms(Path path) throws Exception {
Files.write(path, axiomsSet.stream() //
.map(ElkOwlPrefixManager::removePrefix) //
.sorted() //
.toList());
}
}
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