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The NetCDF-Java Library is a Java interface to NetCDF files, as well as to many other types of scientific data formats.

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/*
 * Copyright 1998-2009 University Corporation for Atmospheric Research/Unidata
 *
 * Portions of this software were developed by the Unidata Program at the
 * University Corporation for Atmospheric Research.
 *
 * Access and use of this software shall impose the following obligations
 * and understandings on the user. The user is granted the right, without
 * any fee or cost, to use, copy, modify, alter, enhance and distribute
 * this software, and any derivative works thereof, and its supporting
 * documentation for any purpose whatsoever, provided that this entire
 * notice appears in all copies of the software, derivative works and
 * supporting documentation.  Further, UCAR requests that the user credit
 * UCAR/Unidata in any publications that result from the use of this
 * software or in any product that includes this software. The names UCAR
 * and/or Unidata, however, may not be used in any advertising or publicity
 * to endorse or promote any products or commercial entity unless specific
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 * understands that UCAR/Unidata is not obligated to provide the user with
 * any support, consulting, training or assistance of any kind with regard
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 *
 * THIS SOFTWARE IS PROVIDED BY UCAR/UNIDATA "AS IS" AND ANY EXPRESS OR
 * IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
 * WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
 * DISCLAIMED. IN NO EVENT SHALL UCAR/UNIDATA BE LIABLE FOR ANY SPECIAL,
 * INDIRECT OR CONSEQUENTIAL DAMAGES OR ANY DAMAGES WHATSOEVER RESULTING
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 */
package ucar.unidata.geoloc.vertical;

import ucar.ma2.*;
import ucar.nc2.*;
import ucar.unidata.util.Parameter;

import java.io.IOException;
import java.util.List;

/**
 * Create a 3D height(z,y,x) array using the netCDF CF convention formula for
 * "Hybrid Sigma Pressure".
 * 

pressure(x,y,z) = a(z)*p0 + b(z)*surfacePressure(x,y) * or *

pressure(x,y,z) = ap(z) + b(z)*surfacePressure(x,y) * * @author caron * @see http://cf-pcmdi.llnl.gov/ */ public class HybridSigmaPressure extends VerticalTransformImpl { /** * P-naught identifier */ public static final String P0 = "P0_variableName"; /** * Surface pressure name identifier */ public static final String PS = "SurfacePressure_variableName"; /** * The "a" variable name identifier */ public static final String A = "A_variableName"; /** * The "a" variable name identifier */ public static final String AP = "AP_variableName"; /** * The "b" variable name identifier */ public static final String B = "B_variableName"; /** * value of p-naught */ private double p0; /** * ps, a, and b variables */ private Variable psVar, aVar, bVar, p0Var; /** * a and b Arrays */ private Array aArray = null, bArray = null; /** * Construct a coordinate transform for sigma pressure * * @param ds netCDF dataset * @param timeDim time dimension * @param params list of transformation Parameters */ public HybridSigmaPressure(NetcdfFile ds, Dimension timeDim, List params) { super(timeDim); String psName = getParameterStringValue(params, PS); String aName = getParameterStringValue(params, A); String bName = getParameterStringValue(params, B); String p0Name = getParameterStringValue(params, P0); String apName = getParameterStringValue(params, AP); if (apName != null) aVar = ds.findVariable(apName); else aVar = ds.findVariable(aName); psVar = ds.findVariable(psName); bVar = ds.findVariable(bName); if (p0Name != null) p0Var = ds.findVariable(p0Name); units = ds.findAttValueIgnoreCase(psVar, "units", "none"); } /** * Get the 3D vertical coordinate array for this time step. * * @param timeIndex the time index. Ignored if !isTimeDependent(). * @return vertical coordinate array * @throws IOException problem reading data * @throws InvalidRangeException _more_ */ public ArrayDouble.D3 getCoordinateArray(int timeIndex) throws IOException, InvalidRangeException { Array psArray = readArray(psVar, timeIndex); if (null == aArray) { aArray = aVar.read(); bArray = bVar.read(); p0 = (p0Var == null) ? 1.0 : p0Var.readScalarDouble(); } int nz = (int) aArray.getSize(); Index aIndex = aArray.getIndex(); Index bIndex = bArray.getIndex(); // it's possible to have rank 3 because pressure can have a level, usually 1 // Check if rank 3 and try to reduce if( psArray.getRank() == 3) psArray = psArray.reduce(0); int[] shape2D = psArray.getShape(); int ny = shape2D[0]; int nx = shape2D[1]; Index psIndex = psArray.getIndex(); ArrayDouble.D3 press = new ArrayDouble.D3(nz, ny, nx); double ps; for (int z = 0; z < nz; z++) { double term1 = aArray.getDouble(aIndex.set(z)) * p0; double bz = bArray.getDouble(bIndex.set(z)); for (int y = 0; y < ny; y++) { for (int x = 0; x < nx; x++) { ps = psArray.getDouble(psIndex.set( y, x)); press.set(z, y, x, term1 + bz * ps); } } } return press; } }





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