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The NetCDF-Java Library is a Java interface to NetCDF files,
as well as to many other types of scientific data formats.
/*
* Copyright 1998-2009 University Corporation for Atmospheric Research/Unidata
*
* Portions of this software were developed by the Unidata Program at the
* University Corporation for Atmospheric Research.
*
* Access and use of this software shall impose the following obligations
* and understandings on the user. The user is granted the right, without
* any fee or cost, to use, copy, modify, alter, enhance and distribute
* this software, and any derivative works thereof, and its supporting
* documentation for any purpose whatsoever, provided that this entire
* notice appears in all copies of the software, derivative works and
* supporting documentation. Further, UCAR requests that the user credit
* UCAR/Unidata in any publications that result from the use of this
* software or in any product that includes this software. The names UCAR
* and/or Unidata, however, may not be used in any advertising or publicity
* to endorse or promote any products or commercial entity unless specific
* written permission is obtained from UCAR/Unidata. The user also
* understands that UCAR/Unidata is not obligated to provide the user with
* any support, consulting, training or assistance of any kind with regard
* to the use, operation and performance of this software nor to provide
* the user with any updates, revisions, new versions or "bug fixes."
*
* THIS SOFTWARE IS PROVIDED BY UCAR/UNIDATA "AS IS" AND ANY EXPRESS OR
* IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
* WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
* DISCLAIMED. IN NO EVENT SHALL UCAR/UNIDATA BE LIABLE FOR ANY SPECIAL,
* INDIRECT OR CONSEQUENTIAL DAMAGES OR ANY DAMAGES WHATSOEVER RESULTING
* FROM LOSS OF USE, DATA OR PROFITS, WHETHER IN AN ACTION OF CONTRACT,
* NEGLIGENCE OR OTHER TORTIOUS ACTION, ARISING OUT OF OR IN CONNECTION
* WITH THE ACCESS, USE OR PERFORMANCE OF THIS SOFTWARE.
*/
// $Id: ARMTrajectoryObsDataset.java 63 2006-07-12 21:50:51Z edavis $
package ucar.nc2.dt.trajectory;
import ucar.nc2.Dimension;
import ucar.nc2.Variable;
import ucar.nc2.Attribute;
import ucar.nc2.constants.FeatureType;
import ucar.nc2.dt.TypedDataset;
import ucar.nc2.dt.TypedDatasetFactoryIF;
import ucar.nc2.dataset.NetcdfDataset;
import ucar.nc2.dataset.VariableEnhanced;
import ucar.nc2.units.DateUnit;
import ucar.nc2.units.SimpleUnit;
import java.io.IOException;
import java.util.Date;
import java.util.List;
/**
* Implements TrajectoryDataset for datasets with these characteristics:
*
* - it has only one dimension, the dimension is UNLIMITED and is named "time"
* - it has one coordinate variable, time(time), with units that
* are udunits time units
* - has the variables latitude(time), longitude(time), and altitude(time) with
* units "deg", "deg", and "m", respectively.
*
*
* @author edavis
* @since Feb 22, 2005T5:37:14 PM
*/
public class ARMTrajectoryObsDataset extends SingleTrajectoryObsDataset implements TypedDatasetFactoryIF
{
private static String timeDimName = "time";
private static String timeVarName = "time_offset";
private static String latVarName = "lat";
private static String lonVarName = "lon";
private static String elevVarName = "alt";
private static String trajId = "trajectory data";
public static boolean isValidFile( NetcdfDataset ncd )
{
return ( buildConfig( ncd) != null );
}
private static Config buildConfig( NetcdfDataset ncd )
{
// Check for global attribute "ingest_software".
Attribute attrib = ncd.findGlobalAttributeIgnoreCase( "ingest_software" );
if ( attrib == null ) return null;
if ( !attrib.isString() ) return null;
if ( attrib.getStringValue().indexOf( "sonde_ingest.c" ) == -1 ) return null;
// Check for existence of global attribute "sounding_number".
attrib = ncd.findGlobalAttributeIgnoreCase( "sounding_number" );
if ( attrib == null ) return null;
if ( !attrib.isString() ) return null;
// Check for existence of global attribute "serial_number".
attrib = ncd.findGlobalAttributeIgnoreCase( "serial_number" );
if ( attrib == null ) return null;
if ( !attrib.isString() ) return null;
// Check for existence of global attribute "launch_status".
attrib = ncd.findGlobalAttributeIgnoreCase( "launch_status" );
if ( attrib == null ) return null;
if ( !attrib.isString() ) return null;
// Check for global attribute "zeb_platform".
attrib = ncd.findGlobalAttributeIgnoreCase( "zeb_platform" );
if ( attrib == null ) return null;
if ( !attrib.isString() ) return null;
// Check for global attribute "history".
attrib = ncd.findGlobalAttributeIgnoreCase( "history" );
if ( attrib == null ) return null;
if ( !attrib.isString() ) return null;
if ( attrib.getStringValue().indexOf( "Zebra DataStore library" ) == -1
&& attrib.getStringValue().indexOf( "zebra-zeblib" ) == -1 )
return null;
// Check that only one dimension and that it is the time dimension.
List list = ncd.getRootGroup().getDimensions();
if ( list.size() != 1 ) return null;
Dimension d = (Dimension) list.get( 0 );
if ( ! d.getName().equals( timeDimName ) ) return null;
Config trajConfig = new Config();
trajConfig.setTimeDim( d);
// Check that have time variable with units that are udunits time
Variable var = ncd.getRootGroup().findVariable( timeVarName );
if ( var == null ) return null;
list = var.getDimensions();
if ( list.size() != 1 ) return null;
d = (Dimension) list.get( 0 );
if ( ! d.getName().equals( timeDimName ) ) return null;
String units = var.findAttribute( "units" ).getStringValue();
Date date = DateUnit.getStandardDate( "0 " + units );
if ( date == null ) return null;
trajConfig.setTimeVar( var);
// Check for latitude variable with time dimension and units convertable to "degrees_north".
var = ncd.getRootGroup().findVariable( latVarName );
if ( var == null ) return null;
list = var.getDimensions();
if ( list.size() != 1 ) return null;
d = (Dimension) list.get( 0 );
if ( ! d.getName().equals( timeDimName ) ) return null;
units = var.findAttribute( "units" ).getStringValue();
if ( ! SimpleUnit.isCompatible( units, "degrees_north" ) ) return null;
trajConfig.setLatVar( var );
// Check for longitude variable with time dimension and units convertable to "degrees_east".
var = ncd.getRootGroup().findVariable( lonVarName );
if ( var == null ) return null;
list = var.getDimensions();
if ( list.size() != 1 ) return null;
d = (Dimension) list.get( 0 );
if ( ! d.getName().equals( timeDimName ) ) return null;
units = var.findAttribute( "units" ).getStringValue();
if ( ! SimpleUnit.isCompatible( units, "degrees_east" ) ) return null;
trajConfig.setLonVar( var );
// Check for altitude variable with time dimension and units convertable to "m".
var = ncd.getRootGroup().findVariable( elevVarName );
if ( var == null ) return null;
list = var.getDimensions();
if ( list.size() != 1 ) return null;
d = (Dimension) list.get( 0 );
if ( ! d.getName().equals( timeDimName ) ) return null;
units = var.findAttribute( "units" ).getStringValue();
if ( units.indexOf( "meters" ) == -1 ) return null; // "meters above Mean Sea Level" not udunits convertible
// if ( ! SimpleUnit.isCompatible( units, "m")) return( false);
((VariableEnhanced)var).setUnitsString("meters" );
trajConfig.setElevVar( var );
trajConfig.setTrajectoryId( trajId);
return trajConfig;
}
/////////////////////////////////////////////////
// TypedDatasetFactoryIF
public boolean isMine(NetcdfDataset ds) { return isValidFile(ds); }
public TypedDataset open( NetcdfDataset ncd, ucar.nc2.util.CancelTask task, StringBuilder errlog) throws IOException {
return new ARMTrajectoryObsDataset( ncd);
}
public FeatureType getScientificDataType() { return FeatureType.TRAJECTORY; }
public ARMTrajectoryObsDataset() {}
public ARMTrajectoryObsDataset( NetcdfDataset ncd ) throws IOException
{
super( ncd);
Config trajConfig = buildConfig( ncd);
this.setTrajectoryInfo( trajConfig );
}
}