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Micro Distribution of the Payara Project for IBM JDK
/*
* DO NOT ALTER OR REMOVE COPYRIGHT NOTICES OR THIS HEADER.
*
* Copyright (c) 2008-2013 Oracle and/or its affiliates. All rights reserved.
*
* The contents of this file are subject to the terms of either the GNU
* General Public License Version 2 only ("GPL") or the Common Development
* and Distribution License("CDDL") (collectively, the "License"). You
* may not use this file except in compliance with the License. You can
* obtain a copy of the License at
* https://glassfish.dev.java.net/public/CDDL+GPL_1_1.html
* or packager/legal/LICENSE.txt. See the License for the specific
* language governing permissions and limitations under the License.
*
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* file and include the License file at packager/legal/LICENSE.txt.
*
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* exception as provided by Oracle in the GPL Version 2 section of the License
* file that accompanied this code.
*
* Modifications:
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package com.sun.enterprise.v3.server;
import com.sun.enterprise.module.bootstrap.ModuleStartup;
import com.sun.enterprise.module.bootstrap.StartupContext;
import com.sun.enterprise.v3.common.DoNothingActionReporter;
import com.sun.enterprise.config.serverbeans.Applications;
import com.sun.enterprise.config.serverbeans.Application;
import com.sun.enterprise.config.serverbeans.Server;
import com.sun.enterprise.config.serverbeans.ServerTags;
import com.sun.enterprise.config.serverbeans.Domain;
import com.sun.enterprise.util.io.FileUtils;
import com.sun.enterprise.util.StringUtils;
import com.sun.enterprise.deploy.shared.ArchiveFactory;
import org.glassfish.hk2.api.IterableProvider;
import org.jvnet.hk2.annotations.Optional;
import org.jvnet.hk2.annotations.Service;
import javax.inject.Inject;
import javax.inject.Named;
import org.jvnet.hk2.config.*;
import org.glassfish.api.admin.CommandRunner;
import org.glassfish.api.admin.ServerEnvironment;
import org.glassfish.api.deployment.DeployCommandParameters;
import org.glassfish.api.deployment.archive.ReadableArchive;
import org.glassfish.api.deployment.archive.WritableArchive;
import org.glassfish.api.ActionReport;
import org.glassfish.deployment.common.DeploymentProperties;
import org.glassfish.internal.api.*;
import java.util.*;
import java.util.jar.*;
import java.util.logging.Logger;
import java.util.logging.Level;
import java.net.URISyntaxException;
import java.net.URI;
import java.io.*;
import java.beans.PropertyVetoException;
import org.glassfish.kernel.KernelLoggerInfo;
/**
* Very simple ModuleStartup that basically force an immediate shutdown.
* When start() is invoked, the upgrade of the domain.xml has already been
* performed.
*
* @author Jerome Dochez
*/
@Service(name="upgrade")
public class UpgradeStartup implements ModuleStartup {
@Inject
CommandRunner runner;
@Inject
AppServerStartup appservStartup;
@Inject
Applications applications;
@Inject
ArchiveFactory archiveFactory;
@Inject
ServerEnvironment env;
@Inject @Named( ServerEnvironment.DEFAULT_INSTANCE_NAME)
Server server;
@Inject
Domain domain;
@Inject
CommandRunner commandRunner;
@Inject @Optional
IterableProvider upgrades;
// we need to refine, a better logger should be used.
@Inject
Logger logger;
@Inject
private InternalSystemAdministrator kernelIdentity;
private final static String MODULE_TYPE = "moduleType";
private final static String J2EE_APPS = "j2ee-apps";
private final static String J2EE_MODULES = "j2ee-modules";
private final static String DOMAIN_TARGET = "domain";
private final static String SIGNATURE_TYPES_PARAM = "-signatureTypes";
private List sigTypeList = new ArrayList();
public void setStartupContext(StartupContext startupContext) {
appservStartup.setStartupContext(startupContext);
}
// do nothing, just return, at the time the upgrade service has
// run correctly.
public void start() {
// we need to disable all the applications before starting server
// so the applications will not get loaded before redeployment
// store the list of previous enabled applications
// so we can reset these applications back to enabled after
// redeployment
List enabledApps = new ArrayList();
List enabledAppNames = new ArrayList();
for (Application app : domain.getApplications().getApplications()) {
logger.log(Level.INFO, "app " + app.getName() + " is " + app.getEnabled() + " resulting in " + Boolean.parseBoolean(app.getEnabled()));
if (Boolean.parseBoolean(app.getEnabled())) {
logger.log(Level.INFO, "Disabling application " + app.getName());
enabledApps.add(app);
enabledAppNames.add(app.getName());
}
}
if (enabledApps.size()>0) {
try {
ConfigSupport.apply(new ConfigCode() {
public Object run(ConfigBeanProxy... configBeanProxies) throws PropertyVetoException, TransactionFailure {
for (ConfigBeanProxy proxy : configBeanProxies) {
Application app = (Application) proxy;
app.setEnabled(Boolean.FALSE.toString());
}
return null;
}
}, enabledApps.toArray(new Application[enabledApps.size()]));
} catch(TransactionFailure tf) {
logger.log(Level.SEVERE, "Exception while disabling applications", tf);
return;
}
}
// start the application server
appservStartup.start();
initializeSigTypeList();
// redeploy all existing applications
for (Application app : applications.getApplications()) {
// we don't need to redeploy lifecycle modules
if (Boolean.valueOf(app.getDeployProperties().getProperty
(ServerTags.IS_LIFECYCLE))) {
continue;
}
logger.log(Level.INFO, "Redeploy application " + app.getName() + " located at " + app.getLocation());
// we let upgrade proceed even if one application
// failed to redeploy
redeployApp(app);
}
// re-enables all applications.
// we need to use the names in the enabledAppNames to find all
// the application refs that need to be re-enabled
// as the previous application collected not longer exist
// after redeployment
if (enabledAppNames.size()>0) {
for (Application app : domain.getApplications().getApplications()) {
if (enabledAppNames.contains(app.getName())) {
logger.log(Level.INFO, "Enabling application " + app.getName());
try {
ConfigSupport.apply(new SingleConfigCode() {
public Object run(Application param) throws PropertyVetoException, TransactionFailure {
if (!Boolean.parseBoolean(param.getEnabled())) {
param.setEnabled(Boolean.TRUE.toString());
}
return null;
}
}, app);
} catch(TransactionFailure tf) {
logger.log(Level.SEVERE, "Exception while disabling applications", tf);
return;
}
}
}
}
// clean up leftover directories
cleanupLeftOverDirectories();
// stop-the server.
KernelLoggerInfo.getLogger().info(KernelLoggerInfo.exitUpgrade);
try {
Thread.sleep(3000);
if (runner!=null) {
runner.getCommandInvocation("stop-domain", new DoNothingActionReporter(), kernelIdentity.getSubject()).execute();
}
} catch (InterruptedException e) {
KernelLoggerInfo.getLogger().log(Level.SEVERE, KernelLoggerInfo.exceptionUpgrade, e);
}
}
public void stop() {
appservStartup.stop();
}
private void cleanupLeftOverDirectories() {
// 1. remove applications/j2ee-apps(modules) directory
File oldJ2eeAppsRepository = new File(
env.getApplicationRepositoryPath(), J2EE_APPS);
FileUtils.whack(oldJ2eeAppsRepository);
File oldJ2eeModulesRepository = new File(
env.getApplicationRepositoryPath(), J2EE_MODULES);
FileUtils.whack(oldJ2eeModulesRepository);
// 2. remove generated/xml/j2ee-apps(modules) directory
File oldJ2eeAppsGeneratedXMLDir = new File(
env.getApplicationGeneratedXMLPath(), J2EE_APPS);
FileUtils.whack(oldJ2eeAppsGeneratedXMLDir);
File oldJ2eeModulesGeneratedXMLDir = new File(
env.getApplicationGeneratedXMLPath(), J2EE_MODULES);
FileUtils.whack(oldJ2eeModulesGeneratedXMLDir);
// 3. remove generated/ejb/j2ee-apps(modules) directory
File oldJ2eeAppsEJBStubDir = new File(
env.getApplicationEJBStubPath(), J2EE_APPS);
FileUtils.whack(oldJ2eeAppsEJBStubDir);
File oldJ2eeModulesEJBStubDir = new File(
env.getApplicationEJBStubPath(), J2EE_MODULES);
FileUtils.whack(oldJ2eeModulesEJBStubDir);
// 4. clean up generated/jsp/j2ee-apps(modules) directory
File oldJ2eeAppsJSPCompileDir = new File(
env.getApplicationCompileJspPath(), J2EE_APPS);
FileUtils.whack(oldJ2eeAppsJSPCompileDir);
File oldJ2eeModulesJSPCompileDir = new File(
env.getApplicationCompileJspPath(), J2EE_MODULES);
FileUtils.whack(oldJ2eeModulesJSPCompileDir);
// 5. clean up old system apps policy files
File policyRootDir = env.getApplicationPolicyFilePath();
File adminapp = new File(policyRootDir, "adminapp");
FileUtils.whack(adminapp);
File admingui = new File(policyRootDir, "admingui");
FileUtils.whack(admingui);
File ejbtimer = new File(policyRootDir, "__ejb_container_timer_app");
FileUtils.whack(ejbtimer);
File mejbapp = new File(policyRootDir, "MEjbApp");
FileUtils.whack(mejbapp);
File wstx = new File(policyRootDir, "WSTXServices");
FileUtils.whack(wstx);
File jwsappclient = new File(policyRootDir, "__JWSappclients");
FileUtils.whack(jwsappclient);
}
private boolean redeployApp(Application app) {
// we don't need to redeploy any v3 type application
if (app.getModule().size() > 0 ) {
logger.log(Level.INFO, "Skip redeploying v3 type application " +
app.getName());
return true;
}
// populate the params and properties from application element first
DeployCommandParameters deployParams = app.getDeployParameters(null);
// for archive deployment, let's repackage the archive and redeploy
// that way
// we cannot just directory redeploy the archive deployed apps in
// v2->v3 upgrade as the repository layout was different in v2
// we should not have to repackage for any upgrade from v3
if (! Boolean.valueOf(app.getDirectoryDeployed())) {
File repackagedFile = null;
try {
repackagedFile = repackageArchive(app);
} catch (IOException ioe) {
logger.log(Level.SEVERE, "Repackaging of application " + app.getName() + " failed: " + ioe.getMessage(), ioe);
return false;
}
if (repackagedFile == null) {
logger.log(Level.SEVERE, "Repackaging of application " + app.getName() + " failed.");
return false;
}
logger.log(Level.INFO, "Repackaged application " + app.getName()
+ " at " + repackagedFile.getPath());
deployParams.path = repackagedFile;
}
deployParams.properties = app.getDeployProperties();
// remove the marker properties so they don't get carried over
// through redeployment
deployParams.properties.remove(MODULE_TYPE);
// add the compatibility property so the applications are
// upgraded/redeployed in a backward compatible way
deployParams.properties.setProperty(
DeploymentProperties.COMPATIBILITY, "v2");
// now override the ones needed for the upgrade
deployParams.enabled = null;
deployParams.force = true;
deployParams.dropandcreatetables = false;
deployParams.createtables = false;
deployParams.target = DOMAIN_TARGET;
ActionReport report = new DoNothingActionReporter();
commandRunner.getCommandInvocation("deploy", report, kernelIdentity.getSubject()).parameters(deployParams).execute();
// should we delete the temp file after we are done
// it seems it might be useful to keep it around for debugging purpose
if (report.getActionExitCode().equals(ActionReport.ExitCode.FAILURE)) {
logger.log(Level.SEVERE, "Redeployment of application " + app.getName() + " failed: " + report.getMessage() + "\nPlease redeploy " + app.getName() + " manually.", report.getFailureCause());
return false;
}
return true;
}
private File repackageArchive(Application app) throws IOException {
URI uri = null;
try {
uri = new URI(app.getLocation());
} catch (URISyntaxException e) {
logger.log(Level.SEVERE, e.getMessage(), e);
}
if (uri == null) {
return null;
}
Properties appProperties = app.getDeployProperties();
String moduleType = appProperties.getProperty(MODULE_TYPE);
String suffix = getSuffixFromType(moduleType);
if (suffix == null) {
suffix = ".jar";
}
File repositoryDir = new File(uri);
// get temporary file directory of the system and set targetDir to it
File tmp = File.createTempFile("upgrade", null);
String targetParentDir = tmp.getParent();
boolean isDeleted = tmp.delete();
if (!isDeleted) {
logger.log(Level.WARNING, "Error in deleting file " + tmp.getAbsolutePath());
}
if (moduleType.equals(ServerTags.J2EE_APPLICATION)) {
return repackageApplication(repositoryDir, targetParentDir, suffix);
} else {
return repackageStandaloneModule(repositoryDir, targetParentDir, suffix);
}
}
private File repackageApplication(File appDir,
String targetParentDir, String suffix) throws IOException {
String appName = appDir.getName();
ReadableArchive source = archiveFactory.openArchive(appDir);
File tempEar = new File(targetParentDir, appName + suffix);
if (tempEar.exists()) {
boolean isDeleted = tempEar.delete();
if (!isDeleted) {
logger.log(Level.WARNING, "Error in deleting file " + tempEar.getAbsolutePath());
}
}
WritableArchive target = archiveFactory.createArchive("jar", tempEar);
Collection directoryEntries = source.getDirectories();
List subModuleEntries = new ArrayList();
List entriesToExclude = new ArrayList();
// first put all the sub module jars to the target archive
for (String directoryEntry : directoryEntries) {
if (directoryEntry.endsWith("_jar") ||
directoryEntry.endsWith("_war") ||
directoryEntry.endsWith("_rar")) {
subModuleEntries.add(directoryEntry);
File moduleJar = processModule(new File(
appDir, directoryEntry), targetParentDir, null);
OutputStream os = null;
InputStream is = new BufferedInputStream(
new FileInputStream(moduleJar));
try {
os = target.putNextEntry(moduleJar.getName());
FileUtils.copy(is, os, moduleJar.length());
} finally {
if (os!=null) {
target.closeEntry();
}
is.close();
}
}
}
// now find all the entries we should exclude to copy to the target
// basically all sub module entries should be excluded
for (String subModuleEntry : subModuleEntries) {
Enumeration ee = source.entries(subModuleEntry);
while (ee.hasMoreElements()) {
String eeEntryName = ee.nextElement();
entriesToExclude.add(eeEntryName);
}
}
// now copy the rest of the entries
Enumeration e = source.entries();
while (e.hasMoreElements()) {
String entryName = e.nextElement();
if (! entriesToExclude.contains(entryName)) {
InputStream sis = source.getEntry(entryName);
if (isSigFile(entryName)) {
logger.log(Level.INFO, "Excluding signature file: "
+ entryName + " from repackaged application: " +
appName + "\n");
continue;
}
if (sis != null) {
InputStream is = new BufferedInputStream(sis);
OutputStream os = null;
try {
os = target.putNextEntry(entryName);
FileUtils.copy(is, os, source.getEntrySize(entryName));
} finally {
if (os!=null) {
target.closeEntry();
}
is.close();
}
}
}
}
// last is manifest if existing.
Manifest m = source.getManifest();
if (m!=null) {
processManifest(m, appName);
OutputStream os = target.putNextEntry(JarFile.MANIFEST_NAME);
m.write(os);
target.closeEntry();
}
source.close();
target.close();
return tempEar;
}
private File repackageStandaloneModule(File moduleDirName,
String targetParentDir, String suffix) throws IOException {
return processModule(moduleDirName, targetParentDir, suffix);
}
// repackage a module and return it as a jar file
private File processModule(File moduleDir, String targetParentDir,
String suffix) throws IOException {
String moduleName = moduleDir.getName();
// sub module in ear case
if (moduleName.endsWith("_jar") || moduleName.endsWith("_war") || moduleName.endsWith("_rar")) {
suffix = "." + moduleName.substring(moduleName.length() - 3);
moduleName = moduleName.substring(0, moduleName.lastIndexOf('_'));
}
ReadableArchive source = archiveFactory.openArchive(moduleDir);
File tempJar = new File(targetParentDir, moduleName + suffix);
if (tempJar.exists()) {
boolean isDeleted = tempJar.delete();
if ( !isDeleted) {
logger.log(Level.WARNING, "Error in deleting file " + tempJar.getAbsolutePath());
}
}
WritableArchive target = archiveFactory.createArchive("jar", tempJar);
Enumeration e = source.entries();
while (e.hasMoreElements()) {
String entryName = e.nextElement();
if (isSigFile(entryName)) {
logger.log(Level.INFO, "Excluding signature file: "
+ entryName + " from repackaged module: " + moduleName +
"\n");
continue;
}
InputStream sis = source.getEntry(entryName);
if (sis != null) {
InputStream is = new BufferedInputStream(sis);
OutputStream os = null;
try {
os = target.putNextEntry(entryName);
FileUtils.copy(is, os, source.getEntrySize(entryName));
} finally {
if (os!=null) {
target.closeEntry();
}
is.close();
}
}
}
// last is manifest if existing.
Manifest m = source.getManifest();
if (m!=null) {
processManifest(m, moduleName);
OutputStream os = target.putNextEntry(JarFile.MANIFEST_NAME);
m.write(os);
target.closeEntry();
}
source.close();
target.close();
return tempJar;
}
private String getSuffixFromType(String moduleType) {
if (moduleType == null) {
return null;
}
if (moduleType.equals(ServerTags.CONNECTOR_MODULE)) {
return ".rar";
}
if (moduleType.equals(ServerTags.EJB_MODULE)) {
return ".jar";
}
if (moduleType.equals(ServerTags.WEB_MODULE)) {
return ".war";
}
if (moduleType.equals(ServerTags.APPCLIENT_MODULE)) {
return ".jar";
}
if (moduleType.equals(ServerTags.J2EE_APPLICATION)) {
return ".ear";
}
return null;
}
private void initializeSigTypeList() {
String sigTypesParam = env.getStartupContext().getArguments().getProperty(SIGNATURE_TYPES_PARAM);
if (sigTypesParam != null) {
sigTypeList = StringUtils.parseStringList(sigTypesParam, ",");
}
sigTypeList.add(".SF");
sigTypeList.add(".sf");
sigTypeList.add(".RSA");
sigTypeList.add(".rsa");
sigTypeList.add(".DSA");
sigTypeList.add(".dsa");
sigTypeList.add(".PGP");
sigTypeList.add(".pgp");
}
private boolean isSigFile(String entryName) {
for (String sigType : sigTypeList) {
if (entryName.endsWith(sigType)) {
return true;
}
}
return false;
}
private void processManifest(Manifest m, String moduleName) {
// remove signature related entries from the file
Map entries = m.getEntries();
Iterator> entryItr = entries.entrySet().iterator();
while (entryItr.hasNext()) {
Attributes attr = entryItr.next().getValue();
Iterator> attrItr = attr.entrySet().iterator();
while (attrItr.hasNext()) {
Object attrKey = attrItr.next().getKey();
if (attrKey instanceof Attributes.Name) {
Attributes.Name attrKey2 = (Attributes.Name) attrKey;
if (attrKey2.toString().trim().equals("Digest-Algorithms")
|| attrKey2.toString().indexOf("-Digest") != -1) {
logger.log(Level.INFO, "Removing signature attribute "
+ attrKey2 + " from manifest in " +
moduleName + "\n");
attrItr.remove();
}
}
}
if (attr.size() == 0) {
entryItr.remove();
}
}
}
}
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