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A Java UIMA-based toolbox for multilingual and efficient terminology extraction an multilingual term alignment
/*******************************************************************************
* Copyright 2015 - CNRS (Centre National de Recherche Scientifique)
*
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
* regarding copyright ownership. The ASF licenses this file
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing,
* software distributed under the License is distributed on an
* "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
* KIND, either express or implied. See the License for the
* specific language governing permissions and limitations
* under the License.
*
*******************************************************************************/
package eu.project.ttc.models;
import java.util.ArrayList;
import java.util.Collection;
import java.util.Collections;
import java.util.Iterator;
import java.util.LinkedHashMap;
import java.util.List;
import java.util.Set;
import java.util.SortedSet;
import com.google.common.base.Joiner;
import com.google.common.base.Optional;
import com.google.common.collect.AbstractIterator;
import com.google.common.collect.ComparisonChain;
import com.google.common.collect.Iterators;
import com.google.common.collect.Lists;
import com.google.common.collect.Sets;
import eu.project.ttc.utils.IteratorUtils;
import eu.project.ttc.utils.TermSuiteConstants;
import eu.project.ttc.utils.TermSuiteUtils;
import eu.project.ttc.utils.TermUtils;
public class Term implements Iterable, Comparable {
private static final String NO_OCCURRENCE = "[No occurrence]";
// private List occurrences = Lists.newArrayList();
private OccurrenceStore occurrenceStore;
private Set documents = Sets.newHashSet();
private Set variations = Sets.newTreeSet();
private Set bases = Sets.newTreeSet();
private Set extensions = Sets.newHashSet();
private Set extensionBases = Sets.newHashSet();
/*
* The identifier and display string of this term
*/
private String groupingKey;
/*
* The numerical id in the term index
*/
private int id;
/*
* The term rank
*/
private int rank;
private double normalizedTermFrequency;
private double normalizedGeneralTermFrequency;
/*
* The weirdness ratio of this term
*/
private double specificity;
/*
* The logarithm of weirdness ratio of this term
*/
// private double wrLog;
/*
* The z-score of wrLog
*/
// private double wrLogZScore;
/*
* The frequency of this term
*/
private int frequency = 0;
/*
* The syntactic pattern of this term
*/
private String pattern;
/*
* The spotting rule
*/
private String spottingRule;
/*
* The morphological components of this term
*/
private List termWords = Lists.newArrayList();
/*
* The context vector
*/
private Optional contextVector = Optional.absent();
/**
* The term class
* @see TermClass
*/
private TermClass termClass;
Term(OccurrenceStore occurrenceStore, int id) {
this.occurrenceStore = occurrenceStore;
this.id = id;
}
Term(OccurrenceStore occurrenceStore, int id, String termId, List termWords, String spottingRule) {
this(occurrenceStore, id);
this.groupingKey = termId;
this.spottingRule = spottingRule;
this.termWords = termWords;
}
public void setFrequency(int frequency) {
this.frequency = frequency;
}
// public double getWR() {
// return getNormalizedTermFrequency() / getNormalizedGeneralTermFrequency();
// }
public void setPattern(String pattern) {
this.pattern = pattern;
}
public Collection getOccurrences() {
return Collections.unmodifiableCollection(occurrenceStore.getOccurrences(this));
}
@Override
public Iterator iterator() {
return getOccurrences().iterator();
}
// public boolean isEmpty() {
// return occurrences.isEmpty();
// }
/**
* Increments the frequency, updates the inner list of source documents of this term
* and optionnaly updates the inner list of occurrences of this term if param
* keepOccurrence is set to true.
*
* @param e
* the occurrence object to add
* @param keepOccurrence
* set this param to true if you need the occurrence to be stored within the object
*
* @see #getOccurrences()
*/
public void addOccurrence(TermOccurrence e, boolean keepOccurrence) {
this.frequency++;
this.documents.add(e.getSourceDocument());
if(keepOccurrence)
occurrenceStore.addOccurrence(this,e);
}
/**
* Adds the parameter occurrence and stores it to the inner occurrence list.
*
* @see #addOccurrence(TermOccurrence, boolean)
* @param e
* the occurrence object
*/
public void addOccurrence(TermOccurrence e) {
this.addOccurrence(e, true);
}
public void addAll(Collection c) {
occurrenceStore.addAllOccurrences(this, c);
}
@Override
public int compareTo(Term o) {
return ComparisonChain.start()
.compare(o.groupingKey.length(), this.groupingKey.length())
.compare(o.groupingKey, this.groupingKey)
.result();
}
@Override
public int hashCode() {
return groupingKey.hashCode();
}
@Override
public boolean equals(Object obj) {
if (obj instanceof Term)
return this.groupingKey.equals(((Term) obj).groupingKey);
else
return false;
}
public String getGroupingKey() {
return groupingKey;
}
@Override
public String toString() {
return this.groupingKey;
}
public boolean isSingleWord() {
return termWords.size() == 1;
}
public boolean isMultiWord() {
return termWords.size() > 1;
}
/**
* Builds a {@link TermVariation} object and add it to {@link #variations} and
* variant{@link #bases}.
*
* @param variant
* @param type
* @param info
*/
public TermVariation addTermVariation(Term variant, VariationType type, Object info) {
TermVariation tv = new TermVariation(type, this, variant, info);
addTermVariation(tv);
return tv;
}
/**
*
* Adds the {@link TermVariation} object to {@link #variations} and variant{@link #bases}.
* @param termVariation
*/
public void addTermVariation(TermVariation termVariation) {
this.variations.add(termVariation);
termVariation.getVariant().bases.add(termVariation);
}
/**
* Removes the param variation from this{@link #variations} and
* from variant's {@link #bases}.
* @param variation
*/
public void removeTermVariation(TermVariation variation) {
this.variations.remove(variation);
variation.getVariant().bases.remove(variation);
}
/**
*
* Calls {@link #asComponentIterator(boolean)} with param true.
*
* @return
*/
public Iterator asComponentIterator() {
return asComponentIterator(true);
}
/**
* Turns the term into a list {@link LemmaStemHolder} where each word of the term
* is given as itself if not compound, or as a list of its components if compound.
*
* @param compoundLevel
* set to true if this method should iterate over
* components when words are compound, set it to false
* if this method should iterate over plain words even though
* they are compounds.
*
* @return
* The list of words and/or (depending on compoundLevel) compounds.
*/
public Iterator asComponentIterator(final boolean compoundLevel) {
return new AbstractIterator() {
private final Iterator it = Term.this.termWords.iterator();
private Iterator currentWordIt;
@Override
protected LemmaStemHolder computeNext() {
if(currentWordIt != null && currentWordIt.hasNext()) {
return currentWordIt.next();
} else if(it.hasNext()) {
TermWord w = it.next();
if(compoundLevel && w.getWord().isCompound()) {
this.currentWordIt = w.getWord().getComponents().iterator();
return this.currentWordIt.next();
} else {
currentWordIt = null;
return w.getWord();
}
} else
return endOfData();
}
};
}
public String getPattern() {
if(pattern == null) {
List labels = Lists.newArrayListWithCapacity(termWords.size());
for(TermWord w:termWords)
labels.add(w.getSyntacticLabel());
pattern = Joiner.on(' ').join(labels);
}
return pattern;
}
public List getWords() {
return this.termWords;
}
public int getFrequency() {
return frequency;
}
// public void removeOccurrence(String file, int begin, int end) {
// // TODO Operation requires a linked list and is still too long. HashMap ?
// Iterator it = this.occurrenceStore.occurrenceIterator(this);
// while(it.hasNext()) {
// TermOccurrence occ = it.next();
// if(occ.getBegin() == begin && occ.getEnd() == end && file.equals(occ.getSourceDocument().getUrl())) {
// it.remove();
// break;
// }
// }
// this.frequency --;
// }
public TermWord firstWord() {
return this.termWords.get(0);
}
public boolean isCompound() {
return isSingleWord() && firstWord().getWord().isCompound();
}
public int getId() {
return id;
}
public String getSpottingRule() {
return spottingRule;
}
public boolean isVariant() {
return !bases.isEmpty();
}
/**
* Use {@link TermUtils#formGetter(TermIndex, boolean)} instead.
* @return
*/
@Deprecated
public Set getForms() {
List forms = Lists.newArrayList();
for(TermOccurrence o:getOccurrences())
forms.add(o.getForm());
LinkedHashMap counters = TermSuiteUtils.getCounters(forms);
return counters.keySet();
}
/**
* Use {@link TermUtils#formGetter(TermIndex, boolean)} instead.
*
* @return
*/
@Deprecated
public String getPilot() {
Iterator it = getForms().iterator();
if(it.hasNext())
return it.next();
else
return NO_OCCURRENCE;
}
/**
* Returns the concatenation of inner words' lemmas.
*/
public String getLemma() {
StringBuilder builder = new StringBuilder();
int i = 0;
for(TermWord tw:this.getWords()) {
if(i>0)
builder.append(TermSuiteConstants.WHITESPACE);
builder.append(tw.getWord().getLemma());
i++;
}
return builder.toString();
}
public List getVariationPaths(int depth) {
ArrayList accu = Lists.newArrayList();
accumulateVariations(
this,
new ArrayList(),
depth,
accu
);
return accu;
}
private void accumulateVariations(Term baseTerm, List currentPath, int depth, List accu) {
if(depth == 0
|| (!currentPath.isEmpty() && this.equals(baseTerm)) // cycle prevention
)
return;
for(TermVariation tv:this.variations) {
currentPath.add(tv);
accu.add(new VariationPath(currentPath));
tv.getVariant().accumulateVariations(baseTerm, currentPath, depth-1, accu);
}
}
/**
*
* Returns the context vector of this term.
*
* The context vector must have been explicitly invoked by user using
* the #computeContextVector(contextSize) method.
*
* @see #isContextVectorComputed()
* @return
* the {@link ContextVector} of this term
* @throws IllegalStateException
* if the inner context vector does not exist (invoke #computeContextVector(contextSize))
* to generate this vector if missing.
*/
public ContextVector getContextVector() {
if(this.contextVector.isPresent())
return this.contextVector.get();
else
throw new IllegalStateException("Context vector not set on term " + this);
}
/**
*
* True if the context vector of this term has been computed.
* float
* @see #getContextVector()
* @return
*/
public boolean isContextVectorComputed() {
return this.contextVector.isPresent();
}
/**
*
* Regenerate the single-word contextVector of this term and returns it.
*
* @param coTermsType
* @param contextSize
* @param cooccFrequencyThreshhold
* @param useTermClasses
* @return
* The computed {@link ContextVector} object
*/
public ContextVector computeContextVector(OccurrenceType coTermsType, int contextSize,
int cooccFrequencyThreshhold, boolean useTermClasses) {
// 1- compute context vector
ContextVector vector = new ContextVector(this, useTermClasses);
vector.addAllCooccurrences(Iterators.concat(contextIterator(coTermsType, contextSize)));
vector.removeCoTerm(this);
this.contextVector = Optional.of(vector);
// 2- filter entries that under the co-occurrence threshold
if(cooccFrequencyThreshhold > 1) {
for(ContextVector.Entry e:this.contextVector.get().getEntries()) {
if(e.getNbCooccs()> contextIterator(final OccurrenceType coTermsType, final int contextSize) {
return new AbstractIterator>() {
private Iterator it = Term.this.occurrenceStore.occurrenceIterator(Term.this);
@Override
protected Iterator computeNext() {
if(this.it.hasNext())
return it.next().contextIterator(coTermsType, contextSize);
else
return endOfData();
}
};
}
public int getDocumentFrequency() {
return this.documents.size();
}
public void normalize(CrossTable crossTable) {
}
public Number getValue() {
return 0;
}
public void setContextVector(ContextVector vector) {
this.contextVector = Optional.of(vector);
}
public void clearContext() {
this.contextVector = Optional.absent();
}
public void setTermClass(TermClass termClass) {
this.termClass = termClass;
}
public TermClass getTermClass() {
return termClass;
}
// public double getWRLog() {
// return Math.log10(1 + getWR());
// }
public Set getVariations() {
return Collections.unmodifiableSet(variations);
}
public Set getBases() {
return Collections.unmodifiableSet(bases);
}
private Iterator getTermVariationsIterator(final Iterable iterable, final VariationType... variantTypes) {
return new AbstractIterator() {
private Iterator it = iterable.iterator();
private TermVariation current = null;
private Set types = Sets.newHashSet(variantTypes);
@Override
protected TermVariation computeNext() {
while(it.hasNext()) {
this.current = it.next();
if(this.types.contains(this.current.getVariationType()))
return this.current;
}
return endOfData();
}
};
}
/**
* Get all variations of given {@link VariationType}s
*
* @param variantTypes
* @return
*/
public Iterable getVariations(final VariationType... variantTypes) {
return IteratorUtils.toIterable(getTermVariationsIterator(this.variations, variantTypes));
}
/**
* Get all bases of given {@link VariationType}s
*
* @param variantTypes
* @return
*/
public Iterable getBases(final VariationType... variantTypes) {
return IteratorUtils.toIterable(getTermVariationsIterator(this.bases, variantTypes));
}
public void setFrequencyNorm(double normalizedTermFrequency) {
this.normalizedTermFrequency = normalizedTermFrequency;
}
public void setGeneralFrequencyNorm(double normalizedGeneralTermFrequency) {
this.normalizedGeneralTermFrequency = normalizedGeneralTermFrequency;
}
/**
* The average number of occurrences of this term in the
* general language corpus for each slice of 1000 words.
*
* @return
*/
public double getGeneralFrequencyNorm() {
return normalizedGeneralTermFrequency;
}
/**
* The average number of occurrences of this term in the
* corpus for each slice of 1000 words.
*
* @return
*/
public double getFrequencyNorm() {
return normalizedTermFrequency;
}
public void addExtension(Term t) {
this.extensions.add(t);
t.extensionBases.add(this);
}
public Set getExtensions() {
return Collections.unmodifiableSet(this.extensions);
}
public Set getExtensionBases() {
return Collections.unmodifiableSet(this.extensionBases);
}
/**
* Do not use this, this will disappear on version 3.0.
* @param variations
*/
@Deprecated
public void setVariations(SortedSet variations) {
this.variations = Sets.newTreeSet(variations);
}
/**
* Do not use this, this will disappear on version 3.0.
* @param variations
*/
@Deprecated
public void setBases(SortedSet bases) {
this.bases = Sets.newTreeSet(bases);
}
public int getRank() {
return rank;
}
public void setRank(int rank) {
this.rank = rank;
}
public double getSpecificity() {
return specificity;
}
public void setSpecificity(double specificity) {
this.specificity = specificity;
}
}
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