Download all versions of pia JAR files with all dependencies
pia from group io.github.bigbio.external (version 1.3.23)
Protein inference toolbox that contains algorithms to merge results from search engines in mass spectrometry and proteomics. It provides functionalities to compute FDR at different levels including PSM, peptide and Protein levels.
Artifact pia
Group io.github.bigbio.external
Version 1.3.23
Last update 02. December 2021
Tags: different inference toolbox peptide spectrometry merge engines provides contains from mass that including results search levels protein functionalities compute algorithms proteomics
Organization Medizinisches Proteom-Center, Medical Bioinformatics
URL https://github.com/mpc-bioinformatics/pia
License BSD license
Dependencies amount 25
Dependencies lombok, picocli, commons-lang3, commons-collections4, jmzidentml, jaxb-api, jaxb-impl, jaxb-core, pride-mod, jmztab, px-submission-core, gson, pride-jaxb, fastutil, xxindex, mascotdatfile, xtandem-parser, biojava-ontology, BaseLib, CvtBaseLib, PDLibrary, sqlite4java, sqlite-jdbc, ehcache, utilities,
There are maybe transitive dependencies!
Group io.github.bigbio.external
Version 1.3.23
Last update 02. December 2021
Tags: different inference toolbox peptide spectrometry merge engines provides contains from mass that including results search levels protein functionalities compute algorithms proteomics
Organization Medizinisches Proteom-Center, Medical Bioinformatics
URL https://github.com/mpc-bioinformatics/pia
License BSD license
Dependencies amount 25
Dependencies lombok, picocli, commons-lang3, commons-collections4, jmzidentml, jaxb-api, jaxb-impl, jaxb-core, pride-mod, jmztab, px-submission-core, gson, pride-jaxb, fastutil, xxindex, mascotdatfile, xtandem-parser, biojava-ontology, BaseLib, CvtBaseLib, PDLibrary, sqlite4java, sqlite-jdbc, ehcache, utilities,
There are maybe transitive dependencies!
pia from group io.github.bigbio.external (version 1.3.22)
Protein inference toolbox that contains algorithms to merge results from search engines in mass spectrometry and proteomics. It provides functionalities to compute FDR at different levels including PSM, peptide and Protein levels.
Artifact pia
Group io.github.bigbio.external
Version 1.3.22
Last update 01. December 2021
Tags: different inference toolbox peptide spectrometry merge engines provides contains from mass that including results search levels protein functionalities compute algorithms proteomics
Organization Medizinisches Proteom-Center, Medical Bioinformatics
URL https://github.com/mpc-bioinformatics/pia
License BSD license
Dependencies amount 23
Dependencies lombok, picocli, commons-lang3, commons-collections4, jmzidentml, jaxb-api, jaxb-impl, jaxb-core, pride-mod, jmztab, px-submission-core, gson, xxindex, mascotdatfile, xtandem-parser, biojava-ontology, BaseLib, CvtBaseLib, PDLibrary, sqlite4java, sqlite-jdbc, ehcache, utilities,
There are maybe transitive dependencies!
Group io.github.bigbio.external
Version 1.3.22
Last update 01. December 2021
Tags: different inference toolbox peptide spectrometry merge engines provides contains from mass that including results search levels protein functionalities compute algorithms proteomics
Organization Medizinisches Proteom-Center, Medical Bioinformatics
URL https://github.com/mpc-bioinformatics/pia
License BSD license
Dependencies amount 23
Dependencies lombok, picocli, commons-lang3, commons-collections4, jmzidentml, jaxb-api, jaxb-impl, jaxb-core, pride-mod, jmztab, px-submission-core, gson, xxindex, mascotdatfile, xtandem-parser, biojava-ontology, BaseLib, CvtBaseLib, PDLibrary, sqlite4java, sqlite-jdbc, ehcache, utilities,
There are maybe transitive dependencies!
pia from group io.github.bigbio.external (version 1.3.21)
Protein inference toolbox that contains algorithms to merge results from search engines in mass spectrometry and proteomics. It provides functionalities to compute FDR at different levels including PSM, peptide and Protein levels.
Artifact pia
Group io.github.bigbio.external
Version 1.3.21
Last update 27. August 2021
Tags: different inference toolbox peptide spectrometry merge engines provides contains from mass that including results search levels protein functionalities compute algorithms proteomics
Organization Medizinisches Proteom-Center, Medical Bioinformatics
URL https://github.com/mpc-bioinformatics/pia
License BSD license
Dependencies amount 23
Dependencies lombok, log4j, picocli, commons-lang3, commons-collections4, jmzidentml, jaxb-api, jaxb-impl, jaxb-core, pride-mod, jmztab, gson, xxindex, mascotdatfile, xtandem-parser, biojava-ontology, BaseLib, CvtBaseLib, PDLibrary, sqlite4java, sqlite-jdbc, ehcache, utilities,
There are maybe transitive dependencies!
Group io.github.bigbio.external
Version 1.3.21
Last update 27. August 2021
Tags: different inference toolbox peptide spectrometry merge engines provides contains from mass that including results search levels protein functionalities compute algorithms proteomics
Organization Medizinisches Proteom-Center, Medical Bioinformatics
URL https://github.com/mpc-bioinformatics/pia
License BSD license
Dependencies amount 23
Dependencies lombok, log4j, picocli, commons-lang3, commons-collections4, jmzidentml, jaxb-api, jaxb-impl, jaxb-core, pride-mod, jmztab, gson, xxindex, mascotdatfile, xtandem-parser, biojava-ontology, BaseLib, CvtBaseLib, PDLibrary, sqlite4java, sqlite-jdbc, ehcache, utilities,
There are maybe transitive dependencies!
pia from group io.github.bigbio.external (version 1.3.20)
Protein inference toolbox that contains algorithms to merge results from search engines in mass spectrometry and proteomics. It provides functionalities to compute FDR at different levels including PSM, peptide and Protein levels.
Artifact pia
Group io.github.bigbio.external
Version 1.3.20
Last update 17. August 2021
Tags: different inference toolbox peptide spectrometry merge engines provides contains from mass that including results search levels protein functionalities compute algorithms proteomics
Organization Medizinisches Proteom-Center, Medical Bioinformatics
URL https://github.com/mpc-bioinformatics/pia
License BSD license
Dependencies amount 21
Dependencies log4j, commons-cli, commons-lang3, commons-collections4, jmzidentml, jaxb-api, jaxb-impl, jaxb-core, pride-mod, jmztab, xxindex, mascotdatfile, xtandem-parser, biojava-ontology, BaseLib, CvtBaseLib, PDLibrary, sqlite4java, sqlite-jdbc, ehcache, utilities,
There are maybe transitive dependencies!
Group io.github.bigbio.external
Version 1.3.20
Last update 17. August 2021
Tags: different inference toolbox peptide spectrometry merge engines provides contains from mass that including results search levels protein functionalities compute algorithms proteomics
Organization Medizinisches Proteom-Center, Medical Bioinformatics
URL https://github.com/mpc-bioinformatics/pia
License BSD license
Dependencies amount 21
Dependencies log4j, commons-cli, commons-lang3, commons-collections4, jmzidentml, jaxb-api, jaxb-impl, jaxb-core, pride-mod, jmztab, xxindex, mascotdatfile, xtandem-parser, biojava-ontology, BaseLib, CvtBaseLib, PDLibrary, sqlite4java, sqlite-jdbc, ehcache, utilities,
There are maybe transitive dependencies!
pia from group io.github.bigbio.external (version 1.3.18)
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