edu.cmu.tetradapp.model.EdgeWeightComparison Maven / Gradle / Ivy
///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// Copyright (C) 1998, 1999, 2000, 2001, 2002, 2003, 2004, 2005, 2006, //
// 2007, 2008, 2009, 2010, 2014, 2015, 2022 by Peter Spirtes, Richard //
// Scheines, Joseph Ramsey, and Clark Glymour. //
// //
// This program is free software; you can redistribute it and/or modify //
// it under the terms of the GNU General Public License as published by //
// the Free Software Foundation; either version 2 of the License, or //
// (at your option) any later version. //
// //
// This program is distributed in the hope that it will be useful, //
// but WITHOUT ANY WARRANTY; without even the implied warranty of //
// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the //
// GNU General Public License for more details. //
// //
// You should have received a copy of the GNU General Public License //
// along with this program; if not, write to the Free Software //
// Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA //
///////////////////////////////////////////////////////////////////////////////
package edu.cmu.tetradapp.model;
import edu.cmu.tetrad.sem.SemIm;
import edu.cmu.tetrad.session.SessionModel;
import edu.cmu.tetrad.util.Matrix;
import edu.cmu.tetrad.util.NumberFormatUtil;
import edu.cmu.tetrad.util.Parameters;
import edu.cmu.tetrad.util.TetradSerializableUtils;
import java.text.NumberFormat;
/**
* @author Michael Freenor
*/
public class EdgeWeightComparison implements SessionModel {
private static final long serialVersionUID = 23L;
private final SemIm reference;
private final SemIm target;
private String name;
public EdgeWeightComparison(SemEstimatorWrapper reference, SemEstimatorWrapper target, Parameters parameters) {
this.reference = reference.getEstimatedSemIm();
this.target = target.getEstimatedSemIm();
}
public EdgeWeightComparison(SemImWrapper reference, SemEstimatorWrapper target, Parameters parameters) {
this.reference = reference.getSemIm();
this.target = target.getEstimatedSemIm();
}
public EdgeWeightComparison(SemImWrapper reference, SemImWrapper target, Parameters parameters) {
this.reference = reference.getSemIm();
this.target = target.getSemIm();
}
/**
* Generates a simple exemplar of this class to test serialization.
*
* @see TetradSerializableUtils
*/
public static DataWrapper serializableInstance() {
return new DataWrapper(new Parameters());
}
public String getDisplayString() {
String displayString = "";
SemIm ref = this.reference;
Matrix referenceMatrix = ref.getEdgeCoef();
Matrix targetMatrix = this.target.getEdgeCoef();
if (targetMatrix.getNumColumns() != referenceMatrix.getNumColumns() || targetMatrix.getNumRows() != referenceMatrix.getNumRows())
return "The SEM IM's you selected don't have the same number of variables! No comparison is possible here.";
double score = 0;
for (int i = 0; i < ref.getEdgeCoef().getNumRows(); i++) {
for (int j = 0; j < ref.getEdgeCoef().getNumColumns(); j++) {
score += (targetMatrix.get(i, j) - referenceMatrix.get(i, j))
* (targetMatrix.get(i, j) - referenceMatrix.get(i, j));
}
}
NumberFormat nf = NumberFormatUtil.getInstance().getNumberFormat();
displayString += "Sum of squared differences of corresponding\nedge weights:\n\n" + nf.format(score);
return displayString;
}
public String getName() {
return this.name;
}
public void setName(String name) {
this.name = name;
}
}
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