edu.cmu.tetrad.algcomparison.statistic.BidirectedRecall Maven / Gradle / Ivy
package edu.cmu.tetrad.algcomparison.statistic;
import edu.cmu.tetrad.data.DataModel;
import edu.cmu.tetrad.graph.Edge;
import edu.cmu.tetrad.graph.Edges;
import edu.cmu.tetrad.graph.Graph;
import edu.cmu.tetrad.graph.GraphTransforms;
/**
* The bidirected edge precision.
*
* @author josephramsey
*/
public class BidirectedRecall implements Statistic {
private static final long serialVersionUID = 23L;
@Override
public String getAbbreviation() {
return "PBR";
}
@Override
public String getDescription() {
return "Recall of bidirected edges compared to the true PAG";
}
@Override
public double getValue(Graph trueGraph, Graph estGraph, DataModel dataModel) {
Graph pag = GraphTransforms.dagToPag(trueGraph);
int tp = 0;
int fn = 0;
for (Edge edge : pag.getEdges()) {
if (Edges.isBidirectedEdge(edge)) {
Edge edge2 = estGraph.getEdge(edge.getNode1(), edge.getNode2());
if (edge2 != null && Edges.isBidirectedEdge(edge2)) {
tp++;
} else {
fn++;
}
}
}
return tp / (double) (tp + fn);
}
@Override
public double getNormValue(double value) {
return value;
}
}