fr.profi.mzdb.MzDbReaderHelper Maven / Gradle / Ivy
package fr.profi.mzdb;
import java.io.File;
import java.util.concurrent.Callable;
import fr.profi.mzdb.io.reader.cache.MzDbEntityCache;
import fr.profi.mzdb.model.SpectrumSlice;
import fr.profi.mzdb.util.concurrent.Callback;
/**
* @author JeT
*
*/
public class MzDbReaderHelper {
private MzDbReaderHelper() {
// helper class
}
/**
* get an async
*
* @param minMz
* @param maxMz
* @param minRt
* @param maxRt
* @param file
* @param cache
* @param callback
* @return
*/
public static Callable getSpectrumSlicesInRanges(
final double minMz,
final double maxMz,
final float minRt,
final float maxRt,
final File file,
final MzDbEntityCache cache,
final Callback callback) {
return new Callable() {
@Override
public SpectrumSlice[] call() throws Exception {
MzDbReader reader = new MzDbReader(file, cache, false);
SpectrumSlice[] msSpectrumSlices = reader.getMsSpectrumSlices(minMz, maxMz, minRt, maxRt);
if (callback != null) {
callback.onCompletion(msSpectrumSlices);
}
return msSpectrumSlices;
}
};
}
}
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