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Files of the artifact APE version 2.3.0 from the group io.github.sanctuuary.

Artifact APE
Group io.github.sanctuuary
Version 2.3.0
Last update 17. February 2024
Tags: exploration large line possible workflows tools command tool automated pipelines collections from computational
Organization not specified
URL https://github.com/sanctuuary/APE
License Apache License, Version 2.0
Dependencies amount 12
Dependencies org.sat4j.core, owlapi-distribution, commons-lang3, log4j-core, graphviz-java, json, slf4j-api, slf4j-simple, antlr4-runtime, snakeyaml, commons-io, okhttp,
There are maybe transitive dependencies!
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Source code of APE version 2.3.0

META-INF
META-INF.META-INF.MANIFEST.MF
META-INF.maven.io.github.sanctuuary.APE
META-INF.maven.io.github.sanctuuary.APE.META-INF.maven.io.github.sanctuuary.APE.pom.properties
META-INF.maven.io.github.sanctuuary.APE.META-INF.maven.io.github.sanctuuary.APE.pom.xml
nl.uu.cs.ape
nl.uu.cs.ape.nl.uu.cs.ape.APE
nl.uu.cs.ape.nl.uu.cs.ape.APEInterface
nl.uu.cs.ape.nl.uu.cs.ape.LocalRun
nl.uu.cs.ape.nl.uu.cs.ape.Main
nl.uu.cs.ape.automaton
nl.uu.cs.ape.automaton.nl.uu.cs.ape.automaton.Automaton
nl.uu.cs.ape.automaton.nl.uu.cs.ape.automaton.Block
nl.uu.cs.ape.automaton.nl.uu.cs.ape.automaton.ModuleAutomaton
nl.uu.cs.ape.automaton.nl.uu.cs.ape.automaton.State
nl.uu.cs.ape.automaton.nl.uu.cs.ape.automaton.StateInterface
nl.uu.cs.ape.automaton.nl.uu.cs.ape.automaton.TypeAutomaton
nl.uu.cs.ape.configuration
nl.uu.cs.ape.configuration.nl.uu.cs.ape.configuration.APEConfigException
nl.uu.cs.ape.configuration.nl.uu.cs.ape.configuration.APECoreConfig
nl.uu.cs.ape.configuration.nl.uu.cs.ape.configuration.APERunConfig
nl.uu.cs.ape.configuration.nl.uu.cs.ape.configuration.ToolAnnotationTag
nl.uu.cs.ape.configuration.tags
nl.uu.cs.ape.configuration.tags.nl.uu.cs.ape.configuration.tags.APEConfigDefaultValue
nl.uu.cs.ape.configuration.tags.nl.uu.cs.ape.configuration.tags.APEConfigDependentTag
nl.uu.cs.ape.configuration.tags.nl.uu.cs.ape.configuration.tags.APEConfigTag
nl.uu.cs.ape.configuration.tags.nl.uu.cs.ape.configuration.tags.APEConfigTagFactory
nl.uu.cs.ape.configuration.tags.nl.uu.cs.ape.configuration.tags.APEConfigTags
nl.uu.cs.ape.configuration.tags.validation
nl.uu.cs.ape.configuration.tags.validation.nl.uu.cs.ape.configuration.tags.validation.ValidationResult
nl.uu.cs.ape.configuration.tags.validation.nl.uu.cs.ape.configuration.tags.validation.ValidationResults
nl.uu.cs.ape.constraints
nl.uu.cs.ape.constraints.nl.uu.cs.ape.constraints.ConstraintFactory
nl.uu.cs.ape.constraints.nl.uu.cs.ape.constraints.ConstraintFormatException
nl.uu.cs.ape.constraints.nl.uu.cs.ape.constraints.ConstraintTemplate
nl.uu.cs.ape.constraints.nl.uu.cs.ape.constraints.ConstraintTemplateParameter
nl.uu.cs.ape.domain
nl.uu.cs.ape.domain.nl.uu.cs.ape.domain.APEDimensionsException
nl.uu.cs.ape.domain.nl.uu.cs.ape.domain.APEDomainSetup
nl.uu.cs.ape.domain.nl.uu.cs.ape.domain.BioToolsAPI
nl.uu.cs.ape.domain.nl.uu.cs.ape.domain.OWLReader
nl.uu.cs.ape.models
nl.uu.cs.ape.models.nl.uu.cs.ape.models.AbstractModule
nl.uu.cs.ape.models.nl.uu.cs.ape.models.AllModules
nl.uu.cs.ape.models.nl.uu.cs.ape.models.AllPredicates
nl.uu.cs.ape.models.nl.uu.cs.ape.models.AllTypes
nl.uu.cs.ape.models.nl.uu.cs.ape.models.AuxModulePredicate
nl.uu.cs.ape.models.nl.uu.cs.ape.models.AuxTypePredicate
nl.uu.cs.ape.models.nl.uu.cs.ape.models.AuxiliaryPredicate
nl.uu.cs.ape.models.nl.uu.cs.ape.models.ConstraintTemplateData
nl.uu.cs.ape.models.nl.uu.cs.ape.models.MappingsException
nl.uu.cs.ape.models.nl.uu.cs.ape.models.Module
nl.uu.cs.ape.models.nl.uu.cs.ape.models.Pair
nl.uu.cs.ape.models.nl.uu.cs.ape.models.Range
nl.uu.cs.ape.models.nl.uu.cs.ape.models.SATAtomMappings
nl.uu.cs.ape.models.nl.uu.cs.ape.models.Type
nl.uu.cs.ape.models.enums
nl.uu.cs.ape.models.enums.nl.uu.cs.ape.models.enums.AtomType
nl.uu.cs.ape.models.enums.nl.uu.cs.ape.models.enums.AtomVarType
nl.uu.cs.ape.models.enums.nl.uu.cs.ape.models.enums.ConfigEnum
nl.uu.cs.ape.models.enums.nl.uu.cs.ape.models.enums.LogicOperation
nl.uu.cs.ape.models.enums.nl.uu.cs.ape.models.enums.NodeType
nl.uu.cs.ape.models.enums.nl.uu.cs.ape.models.enums.SolverType
nl.uu.cs.ape.models.enums.nl.uu.cs.ape.models.enums.SynthesisFlag
nl.uu.cs.ape.models.logic.constructs
nl.uu.cs.ape.models.logic.constructs.nl.uu.cs.ape.models.logic.constructs.APEPredicate
nl.uu.cs.ape.models.logic.constructs.nl.uu.cs.ape.models.logic.constructs.CustomLabel
nl.uu.cs.ape.models.logic.constructs.nl.uu.cs.ape.models.logic.constructs.PredicateLabel
nl.uu.cs.ape.models.logic.constructs.nl.uu.cs.ape.models.logic.constructs.TaxonomyPredicate
nl.uu.cs.ape.models.sltlxStruc
nl.uu.cs.ape.models.sltlxStruc.nl.uu.cs.ape.models.sltlxStruc.CNFClause
nl.uu.cs.ape.models.sltlxStruc.nl.uu.cs.ape.models.sltlxStruc.SLTLxAtom
nl.uu.cs.ape.models.sltlxStruc.nl.uu.cs.ape.models.sltlxStruc.SLTLxAtomVar
nl.uu.cs.ape.models.sltlxStruc.nl.uu.cs.ape.models.sltlxStruc.SLTLxConjunction
nl.uu.cs.ape.models.sltlxStruc.nl.uu.cs.ape.models.sltlxStruc.SLTLxDisjunction
nl.uu.cs.ape.models.sltlxStruc.nl.uu.cs.ape.models.sltlxStruc.SLTLxElem
nl.uu.cs.ape.models.sltlxStruc.nl.uu.cs.ape.models.sltlxStruc.SLTLxEquivalence
nl.uu.cs.ape.models.sltlxStruc.nl.uu.cs.ape.models.sltlxStruc.SLTLxExists
nl.uu.cs.ape.models.sltlxStruc.nl.uu.cs.ape.models.sltlxStruc.SLTLxFinally
nl.uu.cs.ape.models.sltlxStruc.nl.uu.cs.ape.models.sltlxStruc.SLTLxForall
nl.uu.cs.ape.models.sltlxStruc.nl.uu.cs.ape.models.sltlxStruc.SLTLxFormula
nl.uu.cs.ape.models.sltlxStruc.nl.uu.cs.ape.models.sltlxStruc.SLTLxGlobally
nl.uu.cs.ape.models.sltlxStruc.nl.uu.cs.ape.models.sltlxStruc.SLTLxImplication
nl.uu.cs.ape.models.sltlxStruc.nl.uu.cs.ape.models.sltlxStruc.SLTLxLiteral
nl.uu.cs.ape.models.sltlxStruc.nl.uu.cs.ape.models.sltlxStruc.SLTLxNegatedConjunction
nl.uu.cs.ape.models.sltlxStruc.nl.uu.cs.ape.models.sltlxStruc.SLTLxNegation
nl.uu.cs.ape.models.sltlxStruc.nl.uu.cs.ape.models.sltlxStruc.SLTLxNext
nl.uu.cs.ape.models.sltlxStruc.nl.uu.cs.ape.models.sltlxStruc.SLTLxNextOp
nl.uu.cs.ape.models.sltlxStruc.nl.uu.cs.ape.models.sltlxStruc.SLTLxOperation
nl.uu.cs.ape.models.sltlxStruc.nl.uu.cs.ape.models.sltlxStruc.SLTLxParsingAnnotationException
nl.uu.cs.ape.models.sltlxStruc.nl.uu.cs.ape.models.sltlxStruc.SLTLxParsingBaseErrorListener
nl.uu.cs.ape.models.sltlxStruc.nl.uu.cs.ape.models.sltlxStruc.SLTLxParsingGrammarException
nl.uu.cs.ape.models.sltlxStruc.nl.uu.cs.ape.models.sltlxStruc.SLTLxUntil
nl.uu.cs.ape.models.sltlxStruc.nl.uu.cs.ape.models.sltlxStruc.SLTLxVarQuantification
nl.uu.cs.ape.models.sltlxStruc.nl.uu.cs.ape.models.sltlxStruc.SLTLxVariable
nl.uu.cs.ape.models.sltlxStruc.nl.uu.cs.ape.models.sltlxStruc.SLTLxVariableOccurrenceCollection
nl.uu.cs.ape.models.sltlxStruc.nl.uu.cs.ape.models.sltlxStruc.SLTLxVariableSubstitutionCollection
nl.uu.cs.ape.models.sltlxStruc.nl.uu.cs.ape.models.sltlxStruc.SLTLxXOR
nl.uu.cs.ape.models.templateFormulas
nl.uu.cs.ape.models.templateFormulas.nl.uu.cs.ape.models.templateFormulas.SLTLxTemplateFinally
nl.uu.cs.ape.models.templateFormulas.nl.uu.cs.ape.models.templateFormulas.SLTLxTemplateFormula
nl.uu.cs.ape.models.templateFormulas.nl.uu.cs.ape.models.templateFormulas.SLTLxTemplateGlobally
nl.uu.cs.ape.parserSLTLx
nl.uu.cs.ape.parserSLTLx.nl.uu.cs.ape.parserSLTLx.SLTLxSATVisitor
nl.uu.cs.ape.parserSLTLx.sltlx2cnf
nl.uu.cs.ape.parserSLTLx.sltlx2cnf.nl.uu.cs.ape.parserSLTLx.sltlx2cnf.SLTLx.g4
nl.uu.cs.ape.parserSLTLx.sltlx2cnf.nl.uu.cs.ape.parserSLTLx.sltlx2cnf.SLTLx.interp
nl.uu.cs.ape.parserSLTLx.sltlx2cnf.nl.uu.cs.ape.parserSLTLx.sltlx2cnf.SLTLx.tokens
nl.uu.cs.ape.parserSLTLx.sltlx2cnf.nl.uu.cs.ape.parserSLTLx.sltlx2cnf.SLTLxBaseListener
nl.uu.cs.ape.parserSLTLx.sltlx2cnf.nl.uu.cs.ape.parserSLTLx.sltlx2cnf.SLTLxBaseVisitor
nl.uu.cs.ape.parserSLTLx.sltlx2cnf.nl.uu.cs.ape.parserSLTLx.sltlx2cnf.SLTLxLexer.interp
nl.uu.cs.ape.parserSLTLx.sltlx2cnf.nl.uu.cs.ape.parserSLTLx.sltlx2cnf.SLTLxLexer
nl.uu.cs.ape.parserSLTLx.sltlx2cnf.nl.uu.cs.ape.parserSLTLx.sltlx2cnf.SLTLxLexer.tokens
nl.uu.cs.ape.parserSLTLx.sltlx2cnf.nl.uu.cs.ape.parserSLTLx.sltlx2cnf.SLTLxListener
nl.uu.cs.ape.parserSLTLx.sltlx2cnf.nl.uu.cs.ape.parserSLTLx.sltlx2cnf.SLTLxParser
nl.uu.cs.ape.parserSLTLx.sltlx2cnf.nl.uu.cs.ape.parserSLTLx.sltlx2cnf.SLTLxVisitor
nl.uu.cs.ape.solver
nl.uu.cs.ape.solver.nl.uu.cs.ape.solver.ModuleUtils
nl.uu.cs.ape.solver.nl.uu.cs.ape.solver.SolutionInterpreter
nl.uu.cs.ape.solver.nl.uu.cs.ape.solver.SynthesisEngine
nl.uu.cs.ape.solver.minisat
nl.uu.cs.ape.solver.minisat.nl.uu.cs.ape.solver.minisat.EnforceModuleRelatedRules
nl.uu.cs.ape.solver.minisat.nl.uu.cs.ape.solver.minisat.EnforceSLTLxRelatedRules
nl.uu.cs.ape.solver.minisat.nl.uu.cs.ape.solver.minisat.EnforceTypeRelatedRules
nl.uu.cs.ape.solver.minisat.nl.uu.cs.ape.solver.minisat.SATOutput
nl.uu.cs.ape.solver.minisat.nl.uu.cs.ape.solver.minisat.SATSynthesisEngine
nl.uu.cs.ape.solver.minisat.nl.uu.cs.ape.solver.minisat.SatEncodingUtils
nl.uu.cs.ape.solver.solutionStructure
nl.uu.cs.ape.solver.solutionStructure.nl.uu.cs.ape.solver.solutionStructure.ModuleNode
nl.uu.cs.ape.solver.solutionStructure.nl.uu.cs.ape.solver.solutionStructure.SolutionWorkflow
nl.uu.cs.ape.solver.solutionStructure.nl.uu.cs.ape.solver.solutionStructure.SolutionWorkflowNode
nl.uu.cs.ape.solver.solutionStructure.nl.uu.cs.ape.solver.solutionStructure.SolutionsList
nl.uu.cs.ape.solver.solutionStructure.nl.uu.cs.ape.solver.solutionStructure.TypeNode
nl.uu.cs.ape.solver.solutionStructure.cwl
nl.uu.cs.ape.solver.solutionStructure.cwl.nl.uu.cs.ape.solver.solutionStructure.cwl.AbstractCWLCreator
nl.uu.cs.ape.solver.solutionStructure.cwl.nl.uu.cs.ape.solver.solutionStructure.cwl.CWLCreatorBase
nl.uu.cs.ape.solver.solutionStructure.cwl.nl.uu.cs.ape.solver.solutionStructure.cwl.DefaultCWLCreator
nl.uu.cs.ape.solver.solutionStructure.graphviz
nl.uu.cs.ape.solver.solutionStructure.graphviz.nl.uu.cs.ape.solver.solutionStructure.graphviz.SolutionGraph
nl.uu.cs.ape.solver.solutionStructure.graphviz.nl.uu.cs.ape.solver.solutionStructure.graphviz.SolutionGraphFactory
nl.uu.cs.ape.utils
nl.uu.cs.ape.utils.nl.uu.cs.ape.utils.APEFiles
nl.uu.cs.ape.utils.nl.uu.cs.ape.utils.APEUtils
.simplelogger.properties




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