nextflow.script.params.CmdEvalParam.groovy Maven / Gradle / Ivy
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A DSL modelled around the UNIX pipe concept, that simplifies writing parallel and scalable pipelines in a portable manner
/*
* Copyright 2013-2023, Seqera Labs
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*
*/
package nextflow.script.params
import java.util.concurrent.atomic.AtomicInteger
import groovy.transform.InheritConstructors
import groovy.transform.Memoized
/**
* Model process `output: eval PARAM` definition
*
* @author Paolo Di Tommaso
*/
@InheritConstructors
class CmdEvalParam extends BaseOutParam implements OptionalParam {
private static AtomicInteger counter = new AtomicInteger()
private Object target
private int count
{
count = counter.incrementAndGet()
}
String getName() {
return "nxf_out_eval_${count}"
}
BaseOutParam bind( def obj ) {
if( obj !instanceof CharSequence )
throw new IllegalArgumentException("Invalid argument for command output: $this")
// the target value object
target = obj
return this
}
@Memoized
String getTarget(Map context) {
return target instanceof GString
? target.cloneAsLazy(context).toString()
: target.toString()
}
}
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