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A DSL modelled around the UNIX pipe concept, that simplifies writing parallel and scalable pipelines in a portable manner

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/*
 * Copyright 2013-2024, Seqera Labs
 *
 * Licensed under the Apache License, Version 2.0 (the "License");
 * you may not use this file except in compliance with the License.
 * You may obtain a copy of the License at
 *
 *     http://www.apache.org/licenses/LICENSE-2.0
 *
 * Unless required by applicable law or agreed to in writing, software
 * distributed under the License is distributed on an "AS IS" BASIS,
 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 * See the License for the specific language governing permissions and
 * limitations under the License.
 */

package nextflow.mail

import java.nio.file.FileSystems
import java.nio.file.Files
import java.nio.file.Path

import groovy.transform.CompileStatic
import groovy.transform.EqualsAndHashCode
import groovy.transform.ToString
import groovy.util.logging.Slf4j
import nextflow.file.FileHelper
import nextflow.util.MemoryUnit

/**
 * Model a mail attachment
 */
@Slf4j
@CompileStatic
@ToString(includeNames = true)
@EqualsAndHashCode
class Attachment {

    private static final MemoryUnit MAX_SIZE = MemoryUnit.of('20MB')

    /**
     * The attachment file
     */
    private File file

    /**
     * The attachment as classpath resource
     */
    private String resource

    /**
     * Attachment content parameters
     */
    private Map params

    static Attachment resource(Map params, String path) {
        def result = new Attachment()
        result.resource = path
        result.params = params != null ? params : [:]
        return result
    }

    protected Attachment() {}

    Attachment( attach ) {
        this([:], attach)
    }

    Attachment( Map params, attach ) {
        if( attach instanceof File ) {
            this.file = attach
        }
        else if( attach instanceof Path ) {
            this.file = toFile0(attach)
        }
        else if( attach instanceof String || attach instanceof GString ) {
            this.file = new File(attach.toString())
        }
        else if( attach != null )
            throw new IllegalArgumentException("Invalid attachment argument: $attach [${attach.getClass()}]")

        this.params = params != null ? params : [:]
    }

    File getFile() { file }

    String getResource() { resource }

    String getContentId() { params.contentId }

    String getDescription() { params.description }

    String getDisposition() { params.disposition }

    String getFileName() {
        if( params.fileName )
            return params.fileName

        if( file )
            return file.getName()

        if( resource ) {
            def str = resource
            def p = str.indexOf(':')
            if( p!=-1 )
                str = resource.substring(p+1)
            p = str.lastIndexOf('/')
            if( p!=-1 )
                str = str.substring(p+1)
            return str
        }

        return null
    }

    private File toFile0(Path source) {
        checkPath(source)
        if ( source.fileSystem == FileSystems.default )
            return source.toFile()
        final tempDir = Files.createTempDirectory('nf-mail-attach')
        tempDir.toFile().deleteOnExit()
        final target = tempDir.resolve(source.getName())
        FileHelper.copyPath(source, target)
        return target.toFile()
    }

    private void checkPath(Path source) {
        final attrs = FileHelper.readAttributes(source)
        if( !attrs )
            return
        final size = MemoryUnit.of(attrs.size())
        if( size>MAX_SIZE ) {
            log.warn("Mail attachment should not be bigger than ${MAX_SIZE} - check file: ${source.toUriString()}")
        }
        if( attrs.isDirectory() ) {
            throw new IllegalArgumentException("Mail attachment cannot be a directory - offending path: ${source.toUriString()}")
        }
    }
}




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