nextflow.datasource.SraRetryConfig.groovy Maven / Gradle / Ivy
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A DSL modelled around the UNIX pipe concept, that simplifies writing parallel and scalable pipelines in a portable manner
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/*
* Copyright 2013-2024, Seqera Labs
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*
*/
package nextflow.datasource
import groovy.transform.CompileStatic
import groovy.transform.EqualsAndHashCode
import groovy.transform.ToString
import nextflow.util.Duration
/**
* Models retry policy configuration for Sra queries
*
* @author Jorge Ejarque
*/
@ToString(includePackage = false, includeNames = true)
@EqualsAndHashCode
@CompileStatic
class SraRetryConfig {
Duration delay = Duration.of('500ms')
Duration maxDelay = Duration.of('30s')
int maxAttempts = 3
double jitter = 0.25
SraRetryConfig() {
this(Collections.emptyMap())
}
SraRetryConfig(Map config) {
if( config.delay )
delay = config.delay as Duration
if( config.maxDelay )
maxDelay = config.maxDelay as Duration
if( config.maxAttempts )
maxAttempts = config.maxAttempts as int
if( config.jitter )
jitter = config.jitter as double
}
}
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