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A DSL modelled around the UNIX pipe concept, that simplifies writing parallel and scalable pipelines in a portable manner
/*
* Copyright (c) 2013-2016, Centre for Genomic Regulation (CRG).
* Copyright (c) 2013-2016, Paolo Di Tommaso and the respective authors.
*
* This file is part of 'Nextflow'.
*
* Nextflow is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation, either version 3 of the License, or
* (at your option) any later version.
*
* Nextflow is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with Nextflow. If not, see .
*/
package nextflow
import java.nio.file.Path
/**
* Nextflow session interface
*
* @author Paolo Di Tommaso
*/
interface ISession {
/**
* The folder where tasks temporary files are stored
*/
Path getWorkDir()
/**
* The folder where the main script is contained
*/
Path getBaseDir()
/**
* Holds the configuration object
*/
Map getConfig()
/**
* The pipeline script name (without parent path)
*/
String getScriptName()
/**
* @return List of path added to application classpath at runtime
*/
List getLibDir()
/**
* The unique identifier of this session
*/
UUID getUniqueId()
/**
* @return The global script binding object
*/
Binding getBinding()
boolean isCacheable()
boolean isResumeMode()
}
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