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A JSR-203 complaint file system provider for Amazon S3 storage
/*
* Copyright (c) 2013-2015, Centre for Genomic Regulation (CRG).
* Copyright (c) 2013-2015, Paolo Di Tommaso and the respective authors.
*
* This file is part of 'Nextflow'.
*
* Nextflow is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation, either version 3 of the License, or
* (at your option) any later version.
*
* Nextflow is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with Nextflow. If not, see .
*/
/*
* The MIT License (MIT)
*
* Copyright (c) 2014 Javier Arnáiz @arnaix
*
* Permission is hereby granted, free of charge, to any person obtaining a copy
* of this software and associated documentation files (the "Software"), to deal
* in the Software without restriction, including without limitation the rights
* to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
* copies of the Software, and to permit persons to whom the Software is
* furnished to do so, subject to the following conditions:
*
* The above copyright notice and this permission notice shall be included in all
* copies or substantial portions of the Software.
*
* THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
* IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
* FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
* AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
* LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
* OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
* SOFTWARE.
*/
package com.upplication.s3fs.util;
import java.io.ByteArrayOutputStream;
import java.io.IOException;
import java.io.InputStream;
/**
* Utilities for streams
*/
public abstract class IOUtils {
/**
* get the stream content and return as a byte array
* @param is InputStream
* @return byte array
* @throws IOException if the stream is closed
*/
public static byte[] toByteArray(InputStream is) throws IOException {
ByteArrayOutputStream buffer = new ByteArrayOutputStream();
int nRead;
byte[] data = new byte[16384];
while ((nRead = is.read(data, 0, data.length)) != -1) {
buffer.write(data, 0, nRead);
}
buffer.flush();
return buffer.toByteArray();
}
}