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Statistical sampling library for use in virtdata libraries, based
on apache commons math 4
/*
* Licensed to the Apache Software Foundation (ASF) under one or more
* contributor license agreements. See the NOTICE file distributed with
* this work for additional information regarding copyright ownership.
* The ASF licenses this file to You under the Apache License, Version 2.0
* (the "License"); you may not use this file except in compliance with
* the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.apache.commons.math4.analysis.interpolation;
import java.util.Arrays;
import org.apache.commons.numbers.arrays.LinearCombination;
import org.apache.commons.math4.analysis.BivariateFunction;
import org.apache.commons.math4.exception.DimensionMismatchException;
import org.apache.commons.math4.exception.NoDataException;
import org.apache.commons.math4.exception.NonMonotonicSequenceException;
import org.apache.commons.math4.exception.OutOfRangeException;
import org.apache.commons.math4.util.MathArrays;
/**
* Function that implements the
*
* bicubic spline interpolation.
*
* @since 3.4
*/
public class BicubicInterpolatingFunction
implements BivariateFunction {
/** Number of coefficients. */
private static final int NUM_COEFF = 16;
/**
* Matrix to compute the spline coefficients from the function values
* and function derivatives values
*/
private static final double[][] AINV = {
{ 1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 },
{ 0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0 },
{ -3,3,0,0,-2,-1,0,0,0,0,0,0,0,0,0,0 },
{ 2,-2,0,0,1,1,0,0,0,0,0,0,0,0,0,0 },
{ 0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0 },
{ 0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0 },
{ 0,0,0,0,0,0,0,0,-3,3,0,0,-2,-1,0,0 },
{ 0,0,0,0,0,0,0,0,2,-2,0,0,1,1,0,0 },
{ -3,0,3,0,0,0,0,0,-2,0,-1,0,0,0,0,0 },
{ 0,0,0,0,-3,0,3,0,0,0,0,0,-2,0,-1,0 },
{ 9,-9,-9,9,6,3,-6,-3,6,-6,3,-3,4,2,2,1 },
{ -6,6,6,-6,-3,-3,3,3,-4,4,-2,2,-2,-2,-1,-1 },
{ 2,0,-2,0,0,0,0,0,1,0,1,0,0,0,0,0 },
{ 0,0,0,0,2,0,-2,0,0,0,0,0,1,0,1,0 },
{ -6,6,6,-6,-4,-2,4,2,-3,3,-3,3,-2,-1,-2,-1 },
{ 4,-4,-4,4,2,2,-2,-2,2,-2,2,-2,1,1,1,1 }
};
/** Samples x-coordinates */
private final double[] xval;
/** Samples y-coordinates */
private final double[] yval;
/** Set of cubic splines patching the whole data grid */
private final BicubicFunction[][] splines;
/**
* @param x Sample values of the x-coordinate, in increasing order.
* @param y Sample values of the y-coordinate, in increasing order.
* @param f Values of the function on every grid point.
* @param dFdX Values of the partial derivative of function with respect
* to x on every grid point.
* @param dFdY Values of the partial derivative of function with respect
* to y on every grid point.
* @param d2FdXdY Values of the cross partial derivative of function on
* every grid point.
* @throws DimensionMismatchException if the various arrays do not contain
* the expected number of elements.
* @throws NonMonotonicSequenceException if {@code x} or {@code y} are
* not strictly increasing.
* @throws NoDataException if any of the arrays has zero length.
*/
public BicubicInterpolatingFunction(double[] x,
double[] y,
double[][] f,
double[][] dFdX,
double[][] dFdY,
double[][] d2FdXdY)
throws DimensionMismatchException,
NoDataException,
NonMonotonicSequenceException {
final int xLen = x.length;
final int yLen = y.length;
if (xLen == 0 || yLen == 0 || f.length == 0 || f[0].length == 0) {
throw new NoDataException();
}
if (xLen != f.length) {
throw new DimensionMismatchException(xLen, f.length);
}
if (xLen != dFdX.length) {
throw new DimensionMismatchException(xLen, dFdX.length);
}
if (xLen != dFdY.length) {
throw new DimensionMismatchException(xLen, dFdY.length);
}
if (xLen != d2FdXdY.length) {
throw new DimensionMismatchException(xLen, d2FdXdY.length);
}
MathArrays.checkOrder(x);
MathArrays.checkOrder(y);
xval = x.clone();
yval = y.clone();
final int lastI = xLen - 1;
final int lastJ = yLen - 1;
splines = new BicubicFunction[lastI][lastJ];
for (int i = 0; i < lastI; i++) {
if (f[i].length != yLen) {
throw new DimensionMismatchException(f[i].length, yLen);
}
if (dFdX[i].length != yLen) {
throw new DimensionMismatchException(dFdX[i].length, yLen);
}
if (dFdY[i].length != yLen) {
throw new DimensionMismatchException(dFdY[i].length, yLen);
}
if (d2FdXdY[i].length != yLen) {
throw new DimensionMismatchException(d2FdXdY[i].length, yLen);
}
final int ip1 = i + 1;
final double xR = xval[ip1] - xval[i];
for (int j = 0; j < lastJ; j++) {
final int jp1 = j + 1;
final double yR = yval[jp1] - yval[j];
final double xRyR = xR * yR;
final double[] beta = new double[] {
f[i][j], f[ip1][j], f[i][jp1], f[ip1][jp1],
dFdX[i][j] * xR, dFdX[ip1][j] * xR, dFdX[i][jp1] * xR, dFdX[ip1][jp1] * xR,
dFdY[i][j] * yR, dFdY[ip1][j] * yR, dFdY[i][jp1] * yR, dFdY[ip1][jp1] * yR,
d2FdXdY[i][j] * xRyR, d2FdXdY[ip1][j] * xRyR, d2FdXdY[i][jp1] * xRyR, d2FdXdY[ip1][jp1] * xRyR
};
splines[i][j] = new BicubicFunction(computeSplineCoefficients(beta));
}
}
}
/**
* {@inheritDoc}
*/
@Override
public double value(double x, double y)
throws OutOfRangeException {
final int i = searchIndex(x, xval);
final int j = searchIndex(y, yval);
final double xN = (x - xval[i]) / (xval[i + 1] - xval[i]);
final double yN = (y - yval[j]) / (yval[j + 1] - yval[j]);
return splines[i][j].value(xN, yN);
}
/**
* Indicates whether a point is within the interpolation range.
*
* @param x First coordinate.
* @param y Second coordinate.
* @return {@code true} if (x, y) is a valid point.
*/
public boolean isValidPoint(double x, double y) {
if (x < xval[0] ||
x > xval[xval.length - 1] ||
y < yval[0] ||
y > yval[yval.length - 1]) {
return false;
} else {
return true;
}
}
/**
* @param c Coordinate.
* @param val Coordinate samples.
* @return the index in {@code val} corresponding to the interval
* containing {@code c}.
* @throws OutOfRangeException if {@code c} is out of the
* range defined by the boundary values of {@code val}.
*/
private int searchIndex(double c, double[] val) {
final int r = Arrays.binarySearch(val, c);
if (r == -1 ||
r == -val.length - 1) {
throw new OutOfRangeException(c, val[0], val[val.length - 1]);
}
if (r < 0) {
// "c" in within an interpolation sub-interval: Return the
// index of the sample at the lower end of the sub-interval.
return -r - 2;
}
final int last = val.length - 1;
if (r == last) {
// "c" is the last sample of the range: Return the index
// of the sample at the lower end of the last sub-interval.
return last - 1;
}
// "c" is another sample point.
return r;
}
/**
* Compute the spline coefficients from the list of function values and
* function partial derivatives values at the four corners of a grid
* element. They must be specified in the following order:
*
* - f(0,0)
* - f(1,0)
* - f(0,1)
* - f(1,1)
* - fx(0,0)
* - fx(1,0)
* - fx(0,1)
* - fx(1,1)
* - fy(0,0)
* - fy(1,0)
* - fy(0,1)
* - fy(1,1)
* - fxy(0,0)
* - fxy(1,0)
* - fxy(0,1)
* - fxy(1,1)
*
* where the subscripts indicate the partial derivative with respect to
* the corresponding variable(s).
*
* @param beta List of function values and function partial derivatives
* values.
* @return the spline coefficients.
*/
private double[] computeSplineCoefficients(double[] beta) {
final double[] a = new double[NUM_COEFF];
for (int i = 0; i < NUM_COEFF; i++) {
double result = 0;
final double[] row = AINV[i];
for (int j = 0; j < NUM_COEFF; j++) {
result += row[j] * beta[j];
}
a[i] = result;
}
return a;
}
}
/**
* Bicubic function.
*/
class BicubicFunction implements BivariateFunction {
/** Number of points. */
private static final short N = 4;
/** Coefficients */
private final double[][] a;
/**
* Simple constructor.
*
* @param coeff Spline coefficients.
*/
BicubicFunction(double[] coeff) {
a = new double[N][N];
for (int j = 0; j < N; j++) {
final double[] aJ = a[j];
for (int i = 0; i < N; i++) {
aJ[i] = coeff[i * N + j];
}
}
}
/**
* {@inheritDoc}
*/
@Override
public double value(double x, double y) {
if (x < 0 || x > 1) {
throw new OutOfRangeException(x, 0, 1);
}
if (y < 0 || y > 1) {
throw new OutOfRangeException(y, 0, 1);
}
final double x2 = x * x;
final double x3 = x2 * x;
final double[] pX = {1, x, x2, x3};
final double y2 = y * y;
final double y3 = y2 * y;
final double[] pY = {1, y, y2, y3};
return apply(pX, pY, a);
}
/**
* Compute the value of the bicubic polynomial.
*
* @param pX Powers of the x-coordinate.
* @param pY Powers of the y-coordinate.
* @param coeff Spline coefficients.
* @return the interpolated value.
*/
private double apply(double[] pX, double[] pY, double[][] coeff) {
double result = 0;
for (int i = 0; i < N; i++) {
final double r = LinearCombination.value(coeff[i], pY);
result += r * pX[i];
}
return result;
}
}