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Statistical sampling library for use in virtdata libraries, based
on apache commons math 4
/*
* Licensed to the Apache Software Foundation (ASF) under one or more
* contributor license agreements. See the NOTICE file distributed with
* this work for additional information regarding copyright ownership.
* The ASF licenses this file to You under the Apache License, Version 2.0
* (the "License"); you may not use this file except in compliance with
* the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.apache.commons.math4.util;
import java.io.Serializable;
import java.util.Arrays;
import org.apache.commons.math4.exception.NullArgumentException;
/**
* A Simple Kth selector implementation to pick up the
* Kth ordered element from a work array containing the input
* numbers.
* @since 3.4
*/
public class KthSelector implements Serializable {
/** Serializable UID. */
private static final long serialVersionUID = 20140713L;
/** Minimum selection size for insertion sort rather than selection. */
private static final int MIN_SELECT_SIZE = 15;
/** A {@link PivotingStrategyInterface} used for pivoting */
private final PivotingStrategyInterface pivotingStrategy;
/**
* Constructor with default {@link MedianOf3PivotingStrategy median of 3} pivoting strategy
*/
public KthSelector() {
this.pivotingStrategy = new MedianOf3PivotingStrategy();
}
/**
* Constructor with specified pivoting strategy
*
* @param pivotingStrategy pivoting strategy to use
* @throws NullArgumentException when pivotingStrategy is null
* @see MedianOf3PivotingStrategy
* @see RandomPivotingStrategy
* @see CentralPivotingStrategy
*/
public KthSelector(final PivotingStrategyInterface pivotingStrategy)
throws NullArgumentException {
MathUtils.checkNotNull(pivotingStrategy);
this.pivotingStrategy = pivotingStrategy;
}
/** Get the pivotin strategy.
* @return pivoting strategy
*/
public PivotingStrategyInterface getPivotingStrategy() {
return pivotingStrategy;
}
/**
* Select Kth value in the array.
*
* @param work work array to use to find out the Kth value
* @param pivotsHeap cached pivots heap that can be used for efficient estimation
* @param k the index whose value in the array is of interest
* @return Kth value
*/
public double select(final double[] work, final int[] pivotsHeap, final int k) {
int begin = 0;
int end = work.length;
int node = 0;
final boolean usePivotsHeap = pivotsHeap != null;
while (end - begin > MIN_SELECT_SIZE) {
final int pivot;
if (usePivotsHeap && node < pivotsHeap.length &&
pivotsHeap[node] >= 0) {
// the pivot has already been found in a previous call
// and the array has already been partitioned around it
pivot = pivotsHeap[node];
} else {
// select a pivot and partition work array around it
pivot = partition(work, begin, end, pivotingStrategy.pivotIndex(work, begin, end));
if (usePivotsHeap && node < pivotsHeap.length) {
pivotsHeap[node] = pivot;
}
}
if (k == pivot) {
// the pivot was exactly the element we wanted
return work[k];
} else if (k < pivot) {
// the element is in the left partition
end = pivot;
node = FastMath.min(2 * node + 1, usePivotsHeap ? pivotsHeap.length : end);
} else {
// the element is in the right partition
begin = pivot + 1;
node = FastMath.min(2 * node + 2, usePivotsHeap ? pivotsHeap.length : end);
}
}
Arrays.sort(work, begin, end);
return work[k];
}
/**
* Partition an array slice around a pivot.Partitioning exchanges array
* elements such that all elements smaller than pivot are before it and
* all elements larger than pivot are after it.
*
* @param work work array
* @param begin index of the first element of the slice of work array
* @param end index after the last element of the slice of work array
* @param pivot initial index of the pivot
* @return index of the pivot after partition
*/
private int partition(final double[] work, final int begin, final int end, final int pivot) {
final double value = work[pivot];
work[pivot] = work[begin];
int i = begin + 1;
int j = end - 1;
while (i < j) {
while (i < j && Double.compare(work[j], value) > 0) {
--j;
}
while (i < j && Double.compare(work[i], value) < 0) {
++i;
}
if (i < j) {
final double tmp = work[i];
work[i++] = work[j];
work[j--] = tmp;
}
}
if (i >= end || Double.compare(work[i], value) > 0) {
--i;
}
work[begin] = work[i];
work[i] = value;
return i;
}
}