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/*
 * Licensed to the Apache Software Foundation (ASF) under one or more
 * contributor license agreements.  See the NOTICE file distributed with
 * this work for additional information regarding copyright ownership.
 * The ASF licenses this file to You under the Apache License, Version 2.0
 * (the "License"); you may not use this file except in compliance with
 * the License.  You may obtain a copy of the License at
 *
 *      http://www.apache.org/licenses/LICENSE-2.0
 *
 * Unless required by applicable law or agreed to in writing, software
 * distributed under the License is distributed on an "AS IS" BASIS,
 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 * See the License for the specific language governing permissions and
 * limitations under the License.
 */
package org.apache.commons.math3.stat.descriptive;

import org.apache.commons.math3.exception.NotPositiveException;
import org.apache.commons.math3.exception.NullArgumentException;
import org.apache.commons.math3.exception.NumberIsTooLargeException;
import org.apache.commons.math3.exception.MathIllegalArgumentException;
import org.apache.commons.math3.exception.util.LocalizedFormats;
import org.apache.commons.math3.util.MathArrays;

/**
 * Abstract base class for all implementations of the
 * {@link UnivariateStatistic} interface.
 * 

* Provides a default implementation of evaluate(double[]), * delegating to evaluate(double[], int, int) in the natural way. *

*

* Also includes a test method that performs generic parameter * validation for the evaluate methods.

* */ public abstract class AbstractUnivariateStatistic implements UnivariateStatistic { /** Stored data. */ private double[] storedData; /** * Set the data array. *

* The stored value is a copy of the parameter array, not the array itself. *

* @param values data array to store (may be null to remove stored data) * @see #evaluate() */ public void setData(final double[] values) { storedData = (values == null) ? null : values.clone(); } /** * Get a copy of the stored data array. * @return copy of the stored data array (may be null) */ public double[] getData() { return (storedData == null) ? null : storedData.clone(); } /** * Get a reference to the stored data array. * @return reference to the stored data array (may be null) */ protected double[] getDataRef() { return storedData; } /** * Set the data array. The input array is copied, not referenced. * * @param values data array to store * @param begin the index of the first element to include * @param length the number of elements to include * @throws MathIllegalArgumentException if values is null or the indices * are not valid * @see #evaluate() */ public void setData(final double[] values, final int begin, final int length) throws MathIllegalArgumentException { if (values == null) { throw new NullArgumentException(LocalizedFormats.INPUT_ARRAY); } if (begin < 0) { throw new NotPositiveException(LocalizedFormats.START_POSITION, begin); } if (length < 0) { throw new NotPositiveException(LocalizedFormats.LENGTH, length); } if (begin + length > values.length) { throw new NumberIsTooLargeException(LocalizedFormats.SUBARRAY_ENDS_AFTER_ARRAY_END, begin + length, values.length, true); } storedData = new double[length]; System.arraycopy(values, begin, storedData, 0, length); } /** * Returns the result of evaluating the statistic over the stored data. *

* The stored array is the one which was set by previous calls to {@link #setData(double[])}. *

* @return the value of the statistic applied to the stored data * @throws MathIllegalArgumentException if the stored data array is null */ public double evaluate() throws MathIllegalArgumentException { return evaluate(storedData); } /** * {@inheritDoc} */ public double evaluate(final double[] values) throws MathIllegalArgumentException { test(values, 0, 0); return evaluate(values, 0, values.length); } /** * {@inheritDoc} */ public abstract double evaluate(final double[] values, final int begin, final int length) throws MathIllegalArgumentException; /** * {@inheritDoc} */ public abstract UnivariateStatistic copy(); /** * This method is used by evaluate(double[], int, int) methods * to verify that the input parameters designate a subarray of positive length. *

*

    *
  • returns true iff the parameters designate a subarray of * positive length
  • *
  • throws MathIllegalArgumentException if the array is null or * or the indices are invalid
  • *
  • returns false
  • if the array is non-null, but * length is 0. *

* * @param values the input array * @param begin index of the first array element to include * @param length the number of elements to include * @return true if the parameters are valid and designate a subarray of positive length * @throws MathIllegalArgumentException if the indices are invalid or the array is null */ protected boolean test( final double[] values, final int begin, final int length) throws MathIllegalArgumentException { return MathArrays.verifyValues(values, begin, length, false); } /** * This method is used by evaluate(double[], int, int) methods * to verify that the input parameters designate a subarray of positive length. *

*

    *
  • returns true iff the parameters designate a subarray of * non-negative length
  • *
  • throws IllegalArgumentException if the array is null or * or the indices are invalid
  • *
  • returns false
  • if the array is non-null, but * length is 0 unless allowEmpty is true *

* * @param values the input array * @param begin index of the first array element to include * @param length the number of elements to include * @param allowEmpty if true then zero length arrays are allowed * @return true if the parameters are valid * @throws MathIllegalArgumentException if the indices are invalid or the array is null * @since 3.0 */ protected boolean test(final double[] values, final int begin, final int length, final boolean allowEmpty) throws MathIllegalArgumentException { return MathArrays.verifyValues(values, begin, length, allowEmpty); } /** * This method is used by evaluate(double[], double[], int, int) methods * to verify that the begin and length parameters designate a subarray of positive length * and the weights are all non-negative, non-NaN, finite, and not all zero. *

*

    *
  • returns true iff the parameters designate a subarray of * positive length and the weights array contains legitimate values.
  • *
  • throws IllegalArgumentException if any of the following are true: *
    • the values array is null
    • *
    • the weights array is null
    • *
    • the weights array does not have the same length as the values array
    • *
    • the weights array contains one or more infinite values
    • *
    • the weights array contains one or more NaN values
    • *
    • the weights array contains negative values
    • *
    • the start and length arguments do not determine a valid array
    *
  • *
  • returns false
  • if the array is non-null, but * length is 0. *

* * @param values the input array * @param weights the weights array * @param begin index of the first array element to include * @param length the number of elements to include * @return true if the parameters are valid and designate a subarray of positive length * @throws MathIllegalArgumentException if the indices are invalid or the array is null * @since 2.1 */ protected boolean test( final double[] values, final double[] weights, final int begin, final int length) throws MathIllegalArgumentException { return MathArrays.verifyValues(values, weights, begin, length, false); } /** * This method is used by evaluate(double[], double[], int, int) methods * to verify that the begin and length parameters designate a subarray of positive length * and the weights are all non-negative, non-NaN, finite, and not all zero. *

*

    *
  • returns true iff the parameters designate a subarray of * non-negative length and the weights array contains legitimate values.
  • *
  • throws MathIllegalArgumentException if any of the following are true: *
    • the values array is null
    • *
    • the weights array is null
    • *
    • the weights array does not have the same length as the values array
    • *
    • the weights array contains one or more infinite values
    • *
    • the weights array contains one or more NaN values
    • *
    • the weights array contains negative values
    • *
    • the start and length arguments do not determine a valid array
    *
  • *
  • returns false
  • if the array is non-null, but * length is 0 unless allowEmpty is true. *

* * @param values the input array. * @param weights the weights array. * @param begin index of the first array element to include. * @param length the number of elements to include. * @param allowEmpty if {@code true} than allow zero length arrays to pass. * @return {@code true} if the parameters are valid. * @throws NullArgumentException if either of the arrays are null * @throws MathIllegalArgumentException if the array indices are not valid, * the weights array contains NaN, infinite or negative elements, or there * are no positive weights. * @since 3.0 */ protected boolean test(final double[] values, final double[] weights, final int begin, final int length, final boolean allowEmpty) throws MathIllegalArgumentException { return MathArrays.verifyValues(values, weights, begin, length, allowEmpty); } }