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it.tidalwave.bluebill.taxonomy.birds.ebn.italia.EbnItalia1998Importer Maven / Gradle / Ivy
/***********************************************************************************************************************
*
* blueBill Mobile - open source birdwatching
* ==========================================
*
* Copyright (C) 2009, 2010 by Tidalwave s.a.s. (http://www.tidalwave.it)
* http://bluebill.tidalwave.it/mobile/
*
***********************************************************************************************************************
*
* Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with
* the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on
* an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the
* specific language governing permissions and limitations under the License.
*
***********************************************************************************************************************
*
* $Id: EbnItalia1998Importer.java,v d3b28eab0cdd 2010/08/01 20:17:04 fabrizio $
*
**********************************************************************************************************************/
package it.tidalwave.bluebill.taxonomy.birds.ebn.italia;
import java.io.IOException;
import javax.annotation.Nonnull;
import java.util.Locale;
import java.util.Scanner;
import java.io.BufferedReader;
import java.io.InputStreamReader;
import org.openrdf.elmo.Entity;
import org.openrdf.repository.Repository;
import it.tidalwave.bluebill.taxonomy.Taxonomy;
import it.tidalwave.bluebill.taxonomy.TaxonomyConcept;
import it.tidalwave.bluebill.taxonomy.birds.BirdLocaleInfo;
import it.tidalwave.bluebill.taxonomy.birds.BirdTaxonomyImporter;
import it.tidalwave.openrdf.elmo.RDFUtils;
import it.tidalwave.util.EmptyInitializer;
import it.tidalwave.util.logging.Logger;
import java.io.InputStream;
import org.openrdf.repository.RepositoryException;
/***********************************************************************************************************************
*
* @author Fabrizio Giudici
* @version $Id: EbnItalia1998Importer.java,v d3b28eab0cdd 2010/08/01 20:17:04 fabrizio $
*
**********************************************************************************************************************/
public class EbnItalia1998Importer extends BirdTaxonomyImporter
{
private static final String CLASS = EbnItalia1998Importer.class.getName();
private static final Logger logger = Logger.getLogger(CLASS);
/*******************************************************************************************************************
*
*
******************************************************************************************************************/
@Nonnull
public Taxonomy run (@Nonnull final Repository repository,
@Nonnull final String taxonomyName,
@Nonnull final BirdLocaleInfo localeInfo,
@Nonnull final String id)
throws Exception
{
init(repository);
final Taxonomy taxonomy = taxonomyManager.createTaxonomy(taxonomyName, id, repository);
final String avesId = id + "/Animalia/Chordata/Aves";
final TaxonomyConcept aves = taxonomy.createTopConcept("Aves", avesId);
setType(aves, classType);
final InputStream is = getClass().getResourceAsStream(sourceResourceName);
final BufferedReader br = new BufferedReader(new InputStreamReader(is, "UTF-8"));
process1998(br, taxonomy, aves, localeInfo, id);
br.close();
taxonUniqueIdManager.close();
return taxonomy;
}
/*******************************************************************************************************************
*
*
******************************************************************************************************************/
private void process1998 (@Nonnull final BufferedReader br,
@Nonnull final Taxonomy taxonomy,
@Nonnull final TaxonomyConcept aves,
@Nonnull final BirdLocaleInfo localeInfo,
@Nonnull final String id)
throws IOException, RepositoryException
{
initialize();
br.readLine();
br.readLine();
br.readLine();
br.readLine();
br.readLine();
TaxonomyConcept order = null;
TaxonomyConcept family = null;
TaxonomyConcept subFamily = null;
String orderPath = "";
String familyPath = "";
String subFamilyPath = "";
for (;;)
{
String s = br.readLine();
if (s == null)
{
break;
}
s = s.trim();
s = catalogueOfLifeTranslator.fixTypos(s);
if (s.equals(""))
{
continue;
}
// System.err.println(s);
final Scanner scanner = new Scanner(s).useDelimiter("\\t");
if (allUpperCase(s))
{
final String italianName = capitalized(scanner.next().trim());
final String scientificName = capitalized(scanner.next().trim());
logger.fine("2: *%s* *%s*", italianName, scientificName);
if (scientificName.endsWith("es"))
{
orderPath = "/Animalia/Chordata/Aves/" + scientificName;
order = findOrCreateSubConcept(aves, scientificName, id, orderPath, orderType, EmptyInitializer.instance());
RDFUtils.setDisplayName(order.as(Entity.class), italianName, Locale.ITALIAN);
family = null;
subFamily = null;
}
else if (scientificName.endsWith("dae") ||
scientificName.equals("Tetraoninae") ||
scientificName.equals("Phasianinae") ||
scientificName.equals("Larinae") ||
scientificName.equals("Sterninae") ||
scientificName.equals("Numidinae"))
{
if ("Rynchopidae".equals(scientificName))
{
break; // FIXME
}
familyPath = orderPath + "/" + scientificName;
family = findOrCreateSubConcept(order, scientificName, id, familyPath, familyType, EmptyInitializer.instance());
RDFUtils.setDisplayName(family.as(Entity.class), italianName, Locale.ITALIAN);
subFamily = null;
}
else if (scientificName.endsWith("nae"))
{
subFamilyPath = familyPath + "/" + scientificName;
logger.warning("IGNORING SUBFAMILY: %s", scientificName); // FIXME
continue;
// subFamily = findOrCreateSubConcept(family, scientificName, subFamilyPath, subFamilyType);
// RDFUtils.setDisplayName(subFamily.as(Entity.class), italianName, Locale.ITALIAN);
}
else if (scientificName.endsWith("ni"))
{
}
else
{
throw new RuntimeException(scientificName);
}
}
else
{
final String italianName = scanner.next();
if (italianName.equals("Cigno minore*"))
{
continue; // FIXME
}
if (italianName.equals("Cigno della tundra*"))
{
continue; // FIXME
}
if (italianName.equals("Chiurlo piccolo americano*"))
{
continue; // FIXME
}
if (italianName.equals("Gabbiano di Kumlien*"))
{
continue; // FIXME
}
final String scientificName = scanner.next();
// final String scientificName = scanner.next().replace("(", "").replace(")", " ");
final String englishName = scanner.next();
logger.fine("3: *%s* *%s* *%s*", italianName, scientificName, englishName);
final Scanner scanner2 = new Scanner(scientificName).useDelimiter(" ");
final String genusName = scanner2.next();
final String speciesName = scanner2.next();
final String genusPath = familyPath + "/" + genusName;
final TaxonomyConcept genus = findOrCreateSubConcept(family, genusName, id, genusPath, genusType, EmptyInitializer.instance());
final String speciesPath = genusPath + "/" + speciesName;
final TaxonomyConcept species = findOrCreateSubConcept(genus, speciesName, id, speciesPath, speciesType, EmptyInitializer.instance());
RDFUtils.setDisplayName(species.as(Entity.class), italianName, Locale.ITALIAN);
RDFUtils.setDisplayName(species.as(Entity.class), englishName, Locale.ENGLISH);
}
}
}
/*******************************************************************************************************************
*
*
******************************************************************************************************************/
private static boolean allUpperCase (@Nonnull final String string)
{
for (final char c : string.toCharArray())
{
if (Character.isLowerCase(c))
{
return false;
}
}
return true;
}
/*******************************************************************************************************************
*
*
******************************************************************************************************************/
@Nonnull
private static String capitalized (@Nonnull final String string)
{
return string.substring(0, 1).toUpperCase() + string.substring(1).toLowerCase();
}
}
