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it.tidalwave.bluebill.taxonomy.birds.ebn.italia.EbnItalia2003Importer Maven / Gradle / Ivy
/***********************************************************************************************************************
*
* blueBill Mobile - open source birdwatching
* ==========================================
*
* Copyright (C) 2009, 2010 by Tidalwave s.a.s. (http://www.tidalwave.it)
* http://bluebill.tidalwave.it/mobile/
*
***********************************************************************************************************************
*
* Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with
* the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on
* an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the
* specific language governing permissions and limitations under the License.
*
***********************************************************************************************************************
*
* $Id: EbnItalia2003Importer.java,v d3b28eab0cdd 2010/08/01 20:17:04 fabrizio $
*
**********************************************************************************************************************/
package it.tidalwave.bluebill.taxonomy.birds.ebn.italia;
import it.tidalwave.util.NotFoundException;
import java.io.IOException;
import javax.annotation.Nonnull;
import java.util.Locale;
import java.util.Scanner;
import java.io.BufferedReader;
import java.io.FileInputStream;
import java.io.InputStreamReader;
import org.openrdf.elmo.Entity;
import org.openrdf.repository.Repository;
import it.tidalwave.bluebill.taxonomy.Taxonomy;
import it.tidalwave.bluebill.taxonomy.TaxonomyConcept;
import it.tidalwave.bluebill.taxonomy.birds.BirdLocaleInfo;
import it.tidalwave.bluebill.taxonomy.birds.BirdTaxonomyImporter;
import it.tidalwave.openrdf.elmo.RDFUtils;
import it.tidalwave.util.EmptyInitializer;
import it.tidalwave.util.Initializer;
import it.tidalwave.util.logging.Logger;
import java.io.InputStream;
import org.openrdf.repository.RepositoryException;
/***********************************************************************************************************************
*
* @author Fabrizio Giudici
* @version $Id: EbnItalia2003Importer.java,v d3b28eab0cdd 2010/08/01 20:17:04 fabrizio $
*
**********************************************************************************************************************/
public class EbnItalia2003Importer extends BirdTaxonomyImporter
{
private static final String CLASS = EbnItalia2003Importer.class.getName();
private static final Logger logger = Logger.getLogger(CLASS);
/*******************************************************************************************************************
*
*
******************************************************************************************************************/
class LanguageInitializer implements Initializer
{
@Nonnull
private final String[] languages;
@Nonnull
private final String italianName;
@Nonnull
private final String englishName;
@Nonnull
private final BirdLocaleInfo localeInfo;
@Nonnull
private final String scientificName;
public LanguageInitializer (final @Nonnull String[] languages,
final @Nonnull String italianName,
final @Nonnull String englishName,
final @Nonnull BirdLocaleInfo localeInfo,
final @Nonnull String scientificName)
{
this.languages = languages;
this.italianName = italianName;
this.englishName = englishName;
this.localeInfo = localeInfo;
this.scientificName = scientificName;
}
@Nonnull
public TaxonomyConcept initialize (final @Nonnull TaxonomyConcept taxon)
{
for (final String language : languages)
{
String localizedName = "";
try
{
// Italian and english are taken from the EBN checklist;
if ("it".equals(language))
{
localizedName = italianName;
}
else if ("en".equals(language))
{
localizedName = englishName;
}
else
{
localizedName = localeInfo.getLocalizedName(scientificName, language);
}
}
catch (NotFoundException e)
{
try
{
localizedName = localeInfo.getLocalizedName(italianName, language);
}
catch (NotFoundException e2)
{
if ("it".equals(language))
{
localizedName = italianName;
}
else if ("en".equals(language))
{
localizedName = englishName;
}
else
{
localizedName = "n.a. (" + scientificName + ")";
}
logger.fine(" Missing translation for: " + language);
addMissingTranslation(scientificName + " / " + italianName, language);
}
}
RDFUtils.setDisplayName(taxon.as(Entity.class), localizedName, new Locale(language));
}
return taxon;
}
}
/*******************************************************************************************************************
*
*
******************************************************************************************************************/
@Nonnull
public Taxonomy run (@Nonnull final Repository repository,
@Nonnull final String taxonomyName,
@Nonnull final String id)
throws Exception
{
init(repository);
final Taxonomy taxonomy = taxonomyManager.createTaxonomy(taxonomyName, id, repository);
final String avesId = id + "/Animalia/Chordata/Aves";
final TaxonomyConcept aves = taxonomy.createTopConcept("Aves", avesId);
setType(aves, classType);
final InputStream is = getClass().getResourceAsStream(sourceResourceName);
final BufferedReader br = new BufferedReader(new InputStreamReader(is, "UTF-8"));
process2003(br, taxonomy, aves, birdLocaleInfo, id);
br.close();
taxonUniqueIdManager.close();
return taxonomy;
}
/*******************************************************************************************************************
*
*
******************************************************************************************************************/
private void process2003 (@Nonnull final BufferedReader br,
@Nonnull final Taxonomy taxonomy,
@Nonnull final TaxonomyConcept aves,
@Nonnull final BirdLocaleInfo localeInfo,
@Nonnull final String id)
throws IOException, RepositoryException
{
initialize();
br.readLine();
br.readLine();
br.readLine();
TaxonomyConcept order = null;
TaxonomyConcept family = null;
// TaxonomyConcept subFamily = null;
String orderPath = "";
String familyPath = "";
// String subFamilyPath = "";
final String[] languages = { "en", "en_US", "it", "de", "da", "no", "fi", "sv", "fr", "es", "nl" };
for (;;)
{
String s = br.readLine();
if (s == null)
{
break;
}
s = s.trim();
s = catalogueOfLifeTranslator.fixTypos(s);
if (s.equals(""))
{
continue;
}
if (s.equals("$$$$$$$$$$") || s.equals("$$0$$$$$$$$")
|| s.startsWith("segnando nella")
|| s.startsWith("X: specie osservata")
|| s.startsWith("H: specie solo sentita")
|| s.startsWith("#: specie osservata"))
{
continue;
}
// System.err.println(s);
final Scanner scanner = new Scanner(s).useDelimiter("\\$");
if (s.startsWith("-"))
{
scanner.next();
final String orderName = capitalized(scanner.next().trim());
final String familyName = capitalized(scanner.next().trim());
logger.info("**************** ORDER & FAMILY: *%s* *%s*", orderName, familyName);
orderPath = "/Animalia/Chordata/Aves/" + orderName;
familyPath = orderPath + "/" + familyName;
order = findOrCreateSubConcept(aves, orderName, id, orderPath, orderType, EmptyInitializer.instance());
family = findOrCreateSubConcept(order, familyName, id, familyPath, familyType, EmptyInitializer.instance());
// subFamily = null;
}
else
{
final String italianName = scanner.next();
final String scientificName = scanner.next().replace("(", "").replace(")", ""); // FIXME
final String englishName = scanner.next();
final Scanner scanner2 = new Scanner(scientificName).useDelimiter(" ");
final String genusName = scanner2.next();
final String speciesName = scanner2.next();
final String genusPath = familyPath + "/" + genusName;
final String speciesPath = genusPath + "/" + speciesName;
final TaxonomyConcept genus = findOrCreateSubConcept(family, genusName, id, genusPath, genusType, EmptyInitializer.instance());
final LanguageInitializer languageInitializer = new LanguageInitializer(languages, italianName, englishName, localeInfo, scientificName);
final TaxonomyConcept species = findOrCreateSubConcept(genus, speciesName, id, speciesPath, speciesType, languageInitializer);
}
}
}
/*******************************************************************************************************************
*
*
******************************************************************************************************************/
@Nonnull
private static String capitalized (@Nonnull final String string)
{
return string.substring(0, 1).toUpperCase() + string.substring(1).toLowerCase();
}
}
