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OME XML model and metadata classes
/*
* #%L
* OME-XML Java library for working with OME-XML metadata structures.
* %%
* Copyright (C) 2006 - 2016 Open Microscopy Environment:
* - Massachusetts Institute of Technology
* - National Institutes of Health
* - University of Dundee
* - Board of Regents of the University of Wisconsin-Madison
* - Glencoe Software, Inc.
* %%
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
*
* 1. Redistributions of source code must retain the above copyright notice,
* this list of conditions and the following disclaimer.
* 2. Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
* IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
* ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE
* LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
* CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
* SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
* INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
* CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
* ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
* POSSIBILITY OF SUCH DAMAGE.
*
* The views and conclusions contained in the software and documentation are
* those of the authors and should not be interpreted as representing official
* policies, either expressed or implied, of any organization.
* #L%
*/
/*-----------------------------------------------------------------------------
*
* THIS IS AUTOMATICALLY GENERATED CODE. DO NOT MODIFY.
*
*-----------------------------------------------------------------------------
*/
package ome.xml.model;
import java.util.ArrayList;
import java.util.List;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import org.w3c.dom.Document;
import org.w3c.dom.Element;
import org.w3c.dom.Node;
import org.w3c.dom.NodeList;
import javax.xml.bind.DatatypeConverter;
import ome.units.quantity.Angle;
import ome.units.quantity.ElectricPotential;
import ome.units.quantity.Frequency;
import ome.units.quantity.Length;
import ome.units.quantity.Power;
import ome.units.quantity.Pressure;
import ome.units.quantity.Temperature;
import ome.units.quantity.Time;
import ome.units.unit.Unit;
import ome.xml.model.enums.*;
import ome.xml.model.enums.handlers.*;
import ome.xml.model.primitives.*;
public class BinData extends AbstractOMEModelObject
{
// Base: AbstractOMEModelObject -- Name: BinData -- Type: BinData -- modelBaseType: AbstractOMEModelObject -- langBaseType: Object
// -- Constants --
public static final String NAMESPACE = "http://www.openmicroscopy.org/Schemas/OME/2016-06";
/** Logger for this class. */
private static final Logger LOGGER =
LoggerFactory.getLogger(BinData.class);
// -- Instance variables --
// Base64Binary property
private byte[] base64Binary;
// Compression property
private Compression compression;
// BigEndian property
private Boolean bigEndian;
// Length property
private NonNegativeLong length;
// Pixels_BackReference back reference
private Pixels pixels;
// -- Constructors --
/** Default constructor. */
public BinData()
{
}
/**
* Constructs BinData recursively from an XML DOM tree.
* @param element Root of the XML DOM tree to construct a model object
* graph from.
* @param model Handler for the OME model which keeps track of instances
* and references seen during object population.
* @throws EnumerationException If there is an error instantiating an
* enumeration during model object creation.
*/
public BinData(Element element, OMEModel model)
throws EnumerationException
{
update(element, model);
}
/** Copy constructor. */
public BinData(BinData orig)
{
base64Binary = orig.base64Binary;
compression = orig.compression;
bigEndian = orig.bigEndian;
length = orig.length;
pixels = orig.pixels;
}
// -- Custom content from BinData specific template --
// -- OMEModelObject API methods --
/**
* Updates BinData recursively from an XML DOM tree. NOTE: No
* properties are removed, only added or updated.
* @param element Root of the XML DOM tree to construct a model object
* graph from.
* @param model Handler for the OME model which keeps track of instances
* and references seen during object population.
* @throws EnumerationException If there is an error instantiating an
* enumeration during model object creation.
*/
public void update(Element element, OMEModel model)
throws EnumerationException
{
super.update(element, model);
String tagName = element.getTagName();
// Element's text data
String value_textContent = element.getTextContent();
if (value_textContent.trim().length() > 0) {
byte[] rawBytes = DatatypeConverter.parseBase64Binary(value_textContent);
setBase64Binary(rawBytes);
}
if (element.hasAttribute("Compression"))
{
// Attribute property which is an enumeration Compression
setCompression(Compression.fromString(
element.getAttribute("Compression")));
}
if (element.hasAttribute("BigEndian"))
{
// Attribute property BigEndian
setBigEndian(Boolean.valueOf(
element.getAttribute("BigEndian")));
}
if (element.hasAttribute("Length"))
{
// Attribute property Length
setLength(NonNegativeLong.valueOf(
element.getAttribute("Length")));
}
}
// -- BinData API methods --
public boolean link(Reference reference, OMEModelObject o)
{
return super.link(reference, o);
}
// Property Base64Binary
public byte[] getBase64Binary()
{
return base64Binary;
}
public void setBase64Binary(byte[] base64Binary)
{
this.base64Binary = base64Binary;
}
// Property Compression
public Compression getCompression()
{
return compression;
}
public void setCompression(Compression compression)
{
this.compression = compression;
}
// Property BigEndian
public Boolean getBigEndian()
{
return bigEndian;
}
public void setBigEndian(Boolean bigEndian)
{
this.bigEndian = bigEndian;
}
// Property Length
public NonNegativeLong getLength()
{
return length;
}
public void setLength(NonNegativeLong length)
{
this.length = length;
}
// Property Pixels_BackReference
public Pixels getPixels()
{
return pixels;
}
public void setPixels(Pixels pixels_BackReference)
{
this.pixels = pixels_BackReference;
}
public Element asXMLElement(Document document)
{
return asXMLElement(document, null);
}
public Element asXMLElement(Document document, Element BinData_element)
{
// Creating XML block for BinData
if (BinData_element == null)
{
BinData_element =
document.createElementNS(NAMESPACE, "BinData");
}
// Ensure any base annotations add their Elements first
super.asXMLElement(document, BinData_element);
if (base64Binary != null)
{
// Element's text data
String encodedString = DatatypeConverter.printBase64Binary(base64Binary);
BinData_element.setTextContent(encodedString);
}
if (compression != null)
{
// Attribute property Compression
BinData_element.setAttribute("Compression", compression.toString());
}
if (bigEndian != null)
{
// Attribute property BigEndian
BinData_element.setAttribute("BigEndian", bigEndian.toString());
}
if (length != null)
{
// Attribute property Length
BinData_element.setAttribute("Length", length.toString());
}
if (pixels != null)
{
// *** IGNORING *** Skipped back reference Pixels_BackReference
}
return BinData_element;
}
}
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