ome.xml.model.TiffData Maven / Gradle / Ivy
/*
* #%L
* OME-XML Java library for working with OME-XML metadata structures.
* %%
* Copyright (C) 2006 - 2016 Open Microscopy Environment:
* - Massachusetts Institute of Technology
* - National Institutes of Health
* - University of Dundee
* - Board of Regents of the University of Wisconsin-Madison
* - Glencoe Software, Inc.
* %%
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* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
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*/
/*-----------------------------------------------------------------------------
*
* THIS IS AUTOMATICALLY GENERATED CODE. DO NOT MODIFY.
*
*-----------------------------------------------------------------------------
*/
package ome.xml.model;
import java.util.ArrayList;
import java.util.List;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import org.w3c.dom.Document;
import org.w3c.dom.Element;
import org.w3c.dom.Node;
import org.w3c.dom.NodeList;
import ome.units.quantity.Angle;
import ome.units.quantity.ElectricPotential;
import ome.units.quantity.Frequency;
import ome.units.quantity.Length;
import ome.units.quantity.Power;
import ome.units.quantity.Pressure;
import ome.units.quantity.Temperature;
import ome.units.quantity.Time;
import ome.units.unit.Unit;
import ome.xml.model.enums.*;
import ome.xml.model.enums.handlers.*;
import ome.xml.model.primitives.*;
public class TiffData extends AbstractOMEModelObject
{
// Base: -- Name: TiffData -- Type: TiffData -- modelBaseType: AbstractOMEModelObject -- langBaseType: Object
// -- Constants --
public static final String NAMESPACE = "http://www.openmicroscopy.org/Schemas/OME/2016-06";
/** Logger for this class. */
private static final Logger LOGGER =
LoggerFactory.getLogger(TiffData.class);
// -- Instance variables --
// IFD property
private NonNegativeInteger ifd;
// FirstZ property
private NonNegativeInteger firstZ;
// FirstT property
private NonNegativeInteger firstT;
// FirstC property
private NonNegativeInteger firstC;
// PlaneCount property
private NonNegativeInteger planeCount;
// UUID property
private UUID uuid;
// Pixels_BackReference back reference
private Pixels pixels;
// -- Constructors --
/** Default constructor. */
public TiffData()
{
}
/**
* Constructs TiffData recursively from an XML DOM tree.
* @param element Root of the XML DOM tree to construct a model object
* graph from.
* @param model Handler for the OME model which keeps track of instances
* and references seen during object population.
* @throws EnumerationException If there is an error instantiating an
* enumeration during model object creation.
*/
public TiffData(Element element, OMEModel model)
throws EnumerationException
{
update(element, model);
}
/** Copy constructor. */
public TiffData(TiffData orig)
{
ifd = orig.ifd;
firstZ = orig.firstZ;
firstT = orig.firstT;
firstC = orig.firstC;
planeCount = orig.planeCount;
uuid = orig.uuid;
pixels = orig.pixels;
}
// -- Custom content from TiffData specific template --
// -- OMEModelObject API methods --
/**
* Updates TiffData recursively from an XML DOM tree. NOTE: No
* properties are removed, only added or updated.
* @param element Root of the XML DOM tree to construct a model object
* graph from.
* @param model Handler for the OME model which keeps track of instances
* and references seen during object population.
* @throws EnumerationException If there is an error instantiating an
* enumeration during model object creation.
*/
public void update(Element element, OMEModel model)
throws EnumerationException
{
super.update(element, model);
String tagName = element.getTagName();
if (element.hasAttribute("IFD"))
{
// Attribute property IFD
setIFD(NonNegativeInteger.valueOf(
element.getAttribute("IFD")));
}
if (element.hasAttribute("FirstZ"))
{
// Attribute property FirstZ
setFirstZ(NonNegativeInteger.valueOf(
element.getAttribute("FirstZ")));
}
if (element.hasAttribute("FirstT"))
{
// Attribute property FirstT
setFirstT(NonNegativeInteger.valueOf(
element.getAttribute("FirstT")));
}
if (element.hasAttribute("FirstC"))
{
// Attribute property FirstC
setFirstC(NonNegativeInteger.valueOf(
element.getAttribute("FirstC")));
}
if (element.hasAttribute("PlaneCount"))
{
// Attribute property PlaneCount
setPlaneCount(NonNegativeInteger.valueOf(
element.getAttribute("PlaneCount")));
}
List UUID_nodeList =
getChildrenByTagName(element, "UUID");
if (UUID_nodeList.size() > 1)
{
// TODO: Should be its own Exception
throw new RuntimeException(String.format(
"UUID node list size %d != 1",
UUID_nodeList.size()));
}
else if (UUID_nodeList.size() != 0)
{
// Element property UUID which is complex (has
// sub-elements)
setUUID(new UUID(
(Element) UUID_nodeList.get(0), model));
}
}
// -- TiffData API methods --
public boolean link(Reference reference, OMEModelObject o)
{
return super.link(reference, o);
}
// Property IFD
public NonNegativeInteger getIFD()
{
return ifd;
}
public void setIFD(NonNegativeInteger ifd)
{
this.ifd = ifd;
}
// Property FirstZ
public NonNegativeInteger getFirstZ()
{
return firstZ;
}
public void setFirstZ(NonNegativeInteger firstZ)
{
this.firstZ = firstZ;
}
// Property FirstT
public NonNegativeInteger getFirstT()
{
return firstT;
}
public void setFirstT(NonNegativeInteger firstT)
{
this.firstT = firstT;
}
// Property FirstC
public NonNegativeInteger getFirstC()
{
return firstC;
}
public void setFirstC(NonNegativeInteger firstC)
{
this.firstC = firstC;
}
// Property PlaneCount
public NonNegativeInteger getPlaneCount()
{
return planeCount;
}
public void setPlaneCount(NonNegativeInteger planeCount)
{
this.planeCount = planeCount;
}
// Property UUID
public UUID getUUID()
{
return uuid;
}
public void setUUID(UUID uuid)
{
this.uuid = uuid;
}
// Property Pixels_BackReference
public Pixels getPixels()
{
return pixels;
}
public void setPixels(Pixels pixels_BackReference)
{
this.pixels = pixels_BackReference;
}
public Element asXMLElement(Document document)
{
return asXMLElement(document, null);
}
public Element asXMLElement(Document document, Element TiffData_element)
{
// Creating XML block for TiffData
if (TiffData_element == null)
{
TiffData_element =
document.createElementNS(NAMESPACE, "TiffData");
}
// Ensure any base annotations add their Elements first
super.asXMLElement(document, TiffData_element);
if (ifd != null)
{
// Attribute property IFD
TiffData_element.setAttribute("IFD", ifd.toString());
}
if (firstZ != null)
{
// Attribute property FirstZ
TiffData_element.setAttribute("FirstZ", firstZ.toString());
}
if (firstT != null)
{
// Attribute property FirstT
TiffData_element.setAttribute("FirstT", firstT.toString());
}
if (firstC != null)
{
// Attribute property FirstC
TiffData_element.setAttribute("FirstC", firstC.toString());
}
if (planeCount != null)
{
// Attribute property PlaneCount
TiffData_element.setAttribute("PlaneCount", planeCount.toString());
}
if (uuid != null)
{
// Element property UUID which is complex (has
// sub-elements)
Element child =
document.createElementNS(NAMESPACE, "UUID");
uuid.asXMLElement(document, child);
TiffData_element.appendChild(child);
}
if (pixels != null)
{
// *** IGNORING *** Skipped back reference Pixels_BackReference
}
return TiffData_element;
}
}
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