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A multidimensional, type-agnostic image processing library.
/*
* #%L
* ImgLib2: a general-purpose, multidimensional image processing library.
* %%
* Copyright (C) 2009 - 2020 Tobias Pietzsch, Stephan Preibisch, Stephan Saalfeld,
* John Bogovic, Albert Cardona, Barry DeZonia, Christian Dietz, Jan Funke,
* Aivar Grislis, Jonathan Hale, Grant Harris, Stefan Helfrich, Mark Hiner,
* Martin Horn, Steffen Jaensch, Lee Kamentsky, Larry Lindsey, Melissa Linkert,
* Mark Longair, Brian Northan, Nick Perry, Curtis Rueden, Johannes Schindelin,
* Jean-Yves Tinevez and Michael Zinsmaier.
* %%
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
*
* 1. Redistributions of source code must retain the above copyright notice,
* this list of conditions and the following disclaimer.
* 2. Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
* IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
* ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE
* LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
* CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
* SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
* INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
* CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
* ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
* POSSIBILITY OF SUCH DAMAGE.
* #L%
*/
package net.imglib2.img.planar;
import net.imglib2.Dimensions;
import net.imglib2.exception.IncompatibleTypeException;
import net.imglib2.img.ImgFactory;
import net.imglib2.img.NativeImgFactory;
import net.imglib2.img.basictypeaccess.ArrayDataAccessFactory;
import net.imglib2.img.basictypeaccess.array.ArrayDataAccess;
import net.imglib2.type.NativeType;
import net.imglib2.type.NativeTypeFactory;
import net.imglib2.util.Fraction;
import net.imglib2.util.Intervals;
import net.imglib2.util.Util;
/**
* Factory that creates an appropriate {@link PlanarImg}.
*
* @author Tobias Pietzsch
* @author Jan Funke
* @author Stephan Preibisch
* @author Stephan Saalfeld
* @author Johannes Schindelin
* @author Philipp Hanslovsky
*/
public class PlanarImgFactory< T extends NativeType< T > > extends NativeImgFactory< T >
{
public PlanarImgFactory( final T type )
{
super( type );
}
@Override
public PlanarImg< T, ? > create( final long... dimensions )
{
@SuppressWarnings( { "unchecked", "rawtypes" } )
final PlanarImg< T, ? > img = create( dimensions, type(), ( NativeTypeFactory ) type().getNativeTypeFactory() );
return img;
}
@Override
public PlanarImg< T, ? > create( final Dimensions dimensions )
{
return create( Intervals.dimensionsAsLongArray( dimensions ) );
}
@Override
public PlanarImg< T, ? > create( final int[] dimensions )
{
return create( Util.int2long( dimensions ) );
}
private < A extends ArrayDataAccess< A > > PlanarImg< T, ? > create(
final long[] dimensions,
final T type,
final NativeTypeFactory< T, A > typeFactory )
{
Dimensions.verify( dimensions );
final Fraction entitiesPerPixel = type.getEntitiesPerPixel();
final PlanarImg< T, A > img = new PlanarImg<>( ArrayDataAccessFactory.get( typeFactory ), dimensions, entitiesPerPixel );
img.setLinkedType( typeFactory.createLinkedType( img ) );
return img;
}
@SuppressWarnings( { "unchecked", "rawtypes" } )
@Override
public < S > ImgFactory< S > imgFactory( final S type ) throws IncompatibleTypeException
{
if ( NativeType.class.isInstance( type ) )
return new PlanarImgFactory( ( NativeType ) type );
throw new IncompatibleTypeException( this, type.getClass().getCanonicalName() + " does not implement NativeType." );
}
/*
* -----------------------------------------------------------------------
*
* Deprecated API.
*
* Supports backwards compatibility with ImgFactories that are constructed
* without a type instance or supplier.
*
* -----------------------------------------------------------------------
*/
@Deprecated
public PlanarImgFactory()
{
super();
}
@Deprecated
@Override
public PlanarImg< T, ? > create( final long[] dimensions, final T type )
{
cache( type );
@SuppressWarnings( { "unchecked", "rawtypes" } )
final PlanarImg< T, ? > img = create( dimensions, type, ( NativeTypeFactory ) type.getNativeTypeFactory() );
return img;
}
}
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