net.maizegenetics.analysis.chart.TableReportStatCategoryDataset Maven / Gradle / Ivy

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TASSEL is a software package to evaluate traits associations, evolutionary patterns, and linkage disequilibrium.

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package net.maizegenetics.analysis.chart;

import net.maizegenetics.util.TableReport;
import org.jfree.data.statistics.DefaultStatisticalCategoryDataset;

import java.util.ArrayList;
import java.util.Vector;

/**
 * Title: 
 * Description: This will find the categories and estimate the mean and stdeviation for a Tablereport
 * Copyright: Copyright (c) 2004
 * Company: 
 * @author Ed Buckler
 * @version 1.0
 */

public class TableReportStatCategoryDataset extends DefaultStatisticalCategoryDataset {
  String[] seriesNames;
  boolean useStderr=false;

  public TableReportStatCategoryDataset(TableReport theTable, int seriesCategory, int[] seriesY) {
    setTableReport(theTable, seriesCategory, seriesY);
  }

  public TableReportStatCategoryDataset(TableReport theTable, int seriesCategory, int[] seriesY, boolean stderr) {
    this.useStderr=stderr;
    setTableReport(theTable, seriesCategory, seriesY);
  }


  public boolean setTableReport(TableReport theTable, int seriesCategory, int[] seriesY) {
//    int countGood = 0;
    Vector theCategories = new Vector();
    seriesNames = new String[seriesY.length];
    Object[] theSN = theTable.getTableColumnNames();
    for(int x=0; x-->