net.ontopia.topicmaps.db2tm.JDBCDataSource Maven / Gradle / Ivy
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/*
* #!
* Ontopia DB2TM
* #-
* Copyright (C) 2001 - 2013 The Ontopia Project
* #-
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
* !#
*/
package net.ontopia.topicmaps.db2tm;
import java.io.File;
import java.io.IOException;
import java.io.InputStream;
import java.sql.Connection;
import java.sql.DatabaseMetaData;
import java.sql.PreparedStatement;
import java.sql.ResultSet;
import java.sql.ResultSetMetaData;
import java.sql.SQLException;
import java.util.ArrayList;
import java.util.Collection;
import java.util.HashMap;
import java.util.Map;
import java.util.Properties;
import net.ontopia.persistence.proxy.ConnectionFactoryIF;
import net.ontopia.persistence.proxy.DefaultConnectionFactory;
import net.ontopia.utils.OntopiaRuntimeException;
import net.ontopia.utils.StreamUtils;
import org.apache.commons.lang3.StringUtils;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
/**
* INTERNAL: Data source that reads tables via JDBC.
*/
public class JDBCDataSource implements DataSourceIF {
// --- define a logging category.
private static Logger log = LoggerFactory.getLogger(JDBCDataSource.class);
protected final RelationMapping mapping;
protected String propfile;
protected String catalog;
protected String schemaPattern;
protected String tableNamePattern;
protected Connection conn;
public JDBCDataSource(RelationMapping mapping) {
this.mapping = mapping;
}
public JDBCDataSource(RelationMapping mapping, Connection conn) {
this.mapping = mapping;
this.conn = conn;
}
protected void setPropertyFile(String propfile) {
this.propfile = propfile;
}
protected Connection getConnection() {
if (conn == null) {
try {
ConnectionFactoryIF cf =
new DefaultConnectionFactory(loadProperties(), false);
conn = cf.requestConnection();
} catch (Exception t) {
throw new OntopiaRuntimeException(t);
}
}
return conn;
}
@Override
public void close() {
if (conn != null) {
try {
conn.close();
} catch (SQLException t) {
throw new OntopiaRuntimeException(t);
}
conn = null;
}
}
@Override
public Collection getRelations() {
Collection relations = new ArrayList();
Connection c = getConnection();
try {
DatabaseMetaData dbm = c.getMetaData();
ResultSet rs = dbm.getTables(catalog, schemaPattern, tableNamePattern,
new String[] { "TABLE", "VIEW",
"SYSTEM TABLE"});
while (rs.next()) {
String schema_name = rs.getString(2);
String table_name = rs.getString(3);
Relation relation = null;
if (schema_name != null) {
relation = mapping.getRelation(schema_name + "." + table_name);
}
if (relation == null) {
relation = mapping.getRelation(table_name);
}
if (relation == null) {
relation = mapping.getRelation(table_name.toLowerCase());
}
if (relation != null) {
relations.add(relation);
} else {
log.debug("No mapping found for table '{}' in schema '{}'.", table_name, schema_name);
}
}
rs.close();
} catch (Throwable t) {
throw new OntopiaRuntimeException(t);
}
return relations;
}
@Override
public TupleReaderIF getReader(String relation) {
Relation rel = mapping.getRelation(relation);
if (rel == null) {
throw new DB2TMException("Unknown relation: " + relation);
}
return new TupleReader(rel);
}
@Override
public ChangelogReaderIF getChangelogReader(Changelog changelog, String startOrder) {
try {
return new ChangelogReader(changelog, startOrder);
} catch (SQLException e) {
throw new OntopiaRuntimeException("Error creating ChangelogReader", e);
}
}
@Override
public String getMaxOrderValue(Changelog changelog) {
try {
// get datatypes
Map cdatatypes = getColumnTypes(changelog.getTable(), conn);
Integer ocoltypeobj = cdatatypes.get(changelog.getOrderColumn());
if (ocoltypeobj == null) {
ocoltypeobj = cdatatypes.get(changelog.getOrderColumn().toUpperCase());
}
int ocoltype;
if (ocoltypeobj != null) {
ocoltype = ocoltypeobj.intValue();
} else {
ocoltype = 12; // varchar
throw new DB2TMException("Couldn't find data type of order column '" +
changelog.getOrderColumn() + "'");
}
// prepare, bind and execute statement
StringBuilder sb = new StringBuilder();
sb.append("select max(");
sb.append(changelog.getOrderColumn());
sb.append(") from ");
sb.append(changelog.getTable());
String sql = sb.toString();
log.debug("max order value query: {}", sql);
PreparedStatement pstm = null;
ResultSet rs = null;
try {
pstm = conn.prepareStatement(sql);
rs = pstm.executeQuery();
if(rs.next()) {
return JDBCUtils.getHighPrecisionString(rs, 1, ocoltype);
}
} finally {
if (rs != null) {
rs.close();
}
if (pstm != null) {
pstm.close();
}
}
return null;
} catch (Throwable t) {
throw new OntopiaRuntimeException(t);
}
}
/**
* Returns a map from column names to Integer objects representing
* the SQL types of the columns.
*/
private Map getColumnTypes(String table, Connection conn)
throws SQLException {
Map ctypes = getColumnTypes(null, table, conn);
// workaround/hack for Oracle issue. this is safe, but we may want to
// sanitize it somewhat.
if (ctypes.isEmpty() && table.indexOf('.') != -1) {
int pos = table.indexOf('.');
ctypes = getColumnTypes(table.substring(0, pos),
table.substring(pos + 1),
conn);
}
return ctypes;
}
private Map getColumnTypes(String schema,
String table, Connection conn)
throws SQLException {
Map datatypes = new HashMap();
ResultSet rs = conn.getMetaData().getColumns(null, null, table, null);
try {
while(rs.next()) {
// 4: COLUMN_NAME
// 5: DATA_TYPE
datatypes.put(rs.getString(4), rs.getInt(5));
}
} finally {
rs.close();
}
// sometimes the above doesn't produce any results, because some
// implementations require uppercase table names here
if (datatypes.isEmpty()) {
// try with uppercase
rs = conn.getMetaData().getColumns(null, null, table.toUpperCase(), null);
try {
while(rs.next()) {
datatypes.put(rs.getString(4), rs.getInt(5));
}
} finally {
rs.close();
}
}
return datatypes;
}
@Override
public String toString() {
return "JDBCDataSource[propfile=" + propfile + "]";
}
private Properties loadProperties() throws IOException {
File basedir = mapping.getBaseDirectory();
InputStream is = StreamUtils.getInputStream(basedir, propfile);
if (is == null) {
throw new DB2TMException("Couldn't find properties file '" + propfile +
"'");
}
Properties props = new Properties();
props.load(is);
is.close();
return props;
}
private class TupleReader implements TupleReaderIF {
private PreparedStatement stm;
private ResultSet rs;
private int[] coltypes;
private TupleReader(Relation relation) {
// build sql statement from relation definition
StringBuilder sb = new StringBuilder();
sb.append("select r.");
String[] rcols = relation.getColumns();
sb.append(StringUtils.join(rcols, ", r."));
sb.append(" from ");
sb.append(relation.getName());
sb.append(" r");
// add condtion if specified
String condition = relation.getCondition();
if (condition != null) {
sb.append(" where ");
sb.append(condition);
}
String sql = sb.toString();
log.debug("tuple query: {}", sql);
// prepare query
Connection conn = getConnection();
try {
stm = conn.prepareStatement(sql);
stm.setFetchSize(1000);
rs = stm.executeQuery();
// get column datatypes
coltypes = new int[rcols.length];
ResultSetMetaData md = rs.getMetaData();
for (int i=0; i < coltypes.length; i++) {
coltypes[i] = md.getColumnType(i+1);
}
} catch (SQLException e) {
throw new OntopiaRuntimeException("Error in query: " + sql, e);
}
}
@Override
public String[] readNext() {
try {
if (rs.next()) {
String[] result = new String[coltypes.length];
for (int i=0; i < result.length; i++) {
result[i] = JDBCUtils.getString(rs, i+1, coltypes[i]);
}
return result;
} else {
return null;
}
} catch (Throwable t) {
throw new OntopiaRuntimeException(t);
}
}
@Override
public void close() {
try {
if (rs != null) {
rs.close();
}
if (stm != null) {
stm.close();
}
} catch (SQLException t) {
throw new OntopiaRuntimeException(t);
}
}
}
private class ChangelogReader implements ChangelogReaderIF {
private PreparedStatement stm;
private ResultSet rs;
private int[] coltypes;
private int ocoltype;
private int tcix; // tuple start index
private int ocix;
private ChangelogReader(Changelog changelog, String orderValue)
throws SQLException {
// FIXME: require primary key to be specified on both tables
// add test case for it
// build sql statement from relation and changelog definitions
Relation relation = changelog.getRelation();
String[] cpkey = changelog.getPrimaryKey();
String[] rpkey = relation.getPrimaryKey();
if (cpkey.length == 0 && rpkey.length > 0) {
cpkey = rpkey;
} else if(rpkey.length == 0 && cpkey.length > 0) {
rpkey = cpkey;
} else if(rpkey.length == 0 && cpkey.length == 0) {
throw new DB2TMConfigException("Please specify the primary-key on the relation and/or on the changelog table '" + changelog.getTable() + ".");
}
String[] rcols = relation.getColumns();
// use ordering column if no local ordering column
String localOrderColumn = changelog.getLocalOrderColumn();
if (localOrderColumn == null) {
localOrderColumn = changelog.getOrderColumn();
}
StringBuilder sb = new StringBuilder();
sb.append("select distinct");
// list primary key of main relation
for (int i=0; i < rpkey.length; i++) {
if (i > 0) {
sb.append(", ");
}
sb.append(" r.");
sb.append(rpkey[i]);
}
sb.append(", ");
// list relation columns
sb.append(replacePrimaryKey(rcols[0], rpkey, cpkey));
for (int i= 1; i < rcols.length; i++) {
sb.append(", ");
sb.append(replacePrimaryKey(rcols[i], rpkey, cpkey));
}
// list changelog columns
sb.append(", c.");
sb.append(changelog.getOrderColumn());
this.tcix = rpkey.length;
this.ocix = tcix+rcols.length+1;
// nested query to find latest changes
sb.append(" from");
sb.append(" (select ");
String[] cols = new String[cpkey.length];
for (int i=0; i < cpkey.length; i++) {
if (changelog.isExpressionColumn(cpkey[i])) {
cols[i] = changelog.getColumnExpression(cpkey[i]) + " as " + cpkey[i];
} else {
cols[i] = " m1." + cpkey[i];
}
}
sb.append(StringUtils.join(cols, ", "));
sb.append(", m1.");
sb.append(changelog.getOrderColumn());
sb.append(" from ");
sb.append(changelog.getTable());
sb.append(" m1 ");
// add changelog table condition
if (changelog.getCondition() != null) {
sb.append(" where ");
sb.append(changelog.getCondition());
}
sb.append(" order by m1." + changelog.getOrderColumn());
sb.append(") c");
// then left outer join with data table
sb.append(" left outer join ");
sb.append(relation.getName());
sb.append(" r on (");
String[] clauses = new String[cpkey.length];
for (int i=0; i < cpkey.length; i++) {
clauses[i] = "c." + cpkey[i] + " = r." + rpkey[i];
}
sb.append(StringUtils.join(clauses, " and "));
// add condtion if specified
String condition = relation.getCondition();
if (condition != null) {
sb.append(" and ");
sb.append(condition);
}
sb.append(")");
// add order condition
if (orderValue != null) {
sb.append(" where");
sb.append(" c.");
sb.append(changelog.getOrderColumn());
sb.append(" > ?");
}
// order by clause
sb.append(" order by");
for (int i=0; i < cpkey.length; i++) {
if (i > 0) {
sb.append(", ");
}
sb.append(" c.");
sb.append(cpkey[i]);
}
sb.append(", c.");
sb.append(changelog.getOrderColumn());
String sql = sb.toString();
log.debug("changelog query: {}", sql);
Connection conn = getConnection();
// get hold of column data types
Map rdatatypes = getColumnTypes(relation.getName(), conn);
if (rdatatypes.isEmpty()) {
throw new DB2TMInputException("Relation '" + relation.getName() + "' does not exist.");
}
coltypes = new int[rcols.length];
for (int i=0; i < rcols.length; i++) {
if (rdatatypes.containsKey(rcols[i])) {
coltypes[i] = rdatatypes.get(rcols[i]).intValue();
} else if (rdatatypes.containsKey(rcols[i].toUpperCase())) {
coltypes[i] = rdatatypes.get(rcols[i].toUpperCase()).intValue();
} else {
throw new DB2TMInputException("Column '" + rcols[i] + "' in relation '" + relation.getName() + "' does not exist.");
}
}
Map cdatatypes = getColumnTypes(changelog.getTable(), conn);
if (cdatatypes.isEmpty()) {
throw new DB2TMInputException("Relation '" + changelog.getTable() + "' does not exist.");
}
Integer oct = cdatatypes.get(changelog.getOrderColumn());
if (oct == null) {
oct = cdatatypes.get(changelog.getOrderColumn().toUpperCase());
}
if (oct == null) {
throw new DB2TMInputException("Order column '" +
changelog.getOrderColumn() +
"' does not exist");
}
ocoltype = oct.intValue();
// FIXME: consider locking strategy. lock table?
// prepare, bind and execute statement
this.stm = conn.prepareStatement(sql);
// order value
if (orderValue != null) {
int cix = 1;
log.debug("changelog order value: {}", orderValue);
JDBCUtils.setHighPrecisionObject(this.stm, cix, orderValue, ocoltype);
}
this.rs = stm.executeQuery();
}
private String replacePrimaryKey(String col, String[] rpkey, String[] cpkey) {
for (int i=0; i < rpkey.length; i++) {
if (col.equals(rpkey[i])) {
return "c." + cpkey[i];
}
}
return "r." + col;
}
@Override
public String[] readNext() {
try {
if (rs.next()) {
// produce tuple
String[] result = new String[coltypes.length];
for (int i=tcix; i < tcix+result.length; i++) {
result[i-tcix] = JDBCUtils.getString(rs, i+1, coltypes[i-tcix]);
}
return result;
} else {
return null;
}
} catch (Throwable t) {
throw new OntopiaRuntimeException(t);
}
}
@Override
public ChangeType getChangeType() {
try {
// if the primary key is null, then obviously the row has been
// deleted
if (rs.getObject(1) == null) {
return ChangeType.DELETE;
}
// otherwise it's an update
return ChangeType.UPDATE;
} catch (SQLException e) {
throw new OntopiaRuntimeException(e);
}
}
@Override
public String getOrderValue() {
try {
return JDBCUtils.getHighPrecisionString(rs, ocix, ocoltype);
} catch (Throwable t) {
throw new OntopiaRuntimeException(t);
}
}
@Override
public void close() {
try {
if (rs != null) {
rs.close();
}
if (stm != null) {
stm.close();
}
} catch (Throwable t) {
throw new OntopiaRuntimeException(t);
}
}
}
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