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Download proteomics JAR 3.0.0 with all dependencies


Lightweight framework for handling biological and bioinformatical data related to proteomics.

Files of the artifact proteomics version 3.0.0 from the group net.sf.bioutils.proteomics.

Artifact proteomics
Group net.sf.bioutils.proteomics
Version 3.0.0
Last update 22. April 2015
Tags: biological data lightweight bioinformatical proteomics framework handling related
Organization not specified
URL https://sourceforge.net/projects/bioutils-proteo/
License The Apache Software License, Version 2.0
Dependencies amount 4
Dependencies kerner-utils-collections, kerner-utils, jranges, jfasta,
There are maybe transitive dependencies!
There is a newer version: 3.1.6
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Source code of proteomics version 3.0.0

META-INF
META-INF.META-INF.MANIFEST.MF
net.sf.bioutils.proteomics
net.sf.bioutils.proteomics.net.sf.bioutils.proteomics.ClonerPeak
net.sf.bioutils.proteomics.net.sf.bioutils.proteomics.ClonerSample
net.sf.bioutils.proteomics.net.sf.bioutils.proteomics.ComposableElement
net.sf.bioutils.proteomics.net.sf.bioutils.proteomics.ComposableElementCollapsed
net.sf.bioutils.proteomics.net.sf.bioutils.proteomics.ComposableObject
net.sf.bioutils.proteomics.net.sf.bioutils.proteomics.CopierFilterNames
net.sf.bioutils.proteomics.net.sf.bioutils.proteomics.Intensity
net.sf.bioutils.proteomics.net.sf.bioutils.proteomics.MassUnit
net.sf.bioutils.proteomics.net.sf.bioutils.proteomics.Spectrum
net.sf.bioutils.proteomics.net.sf.bioutils.proteomics.TransformerSampleSubset
net.sf.bioutils.proteomics.net.sf.bioutils.proteomics.User
net.sf.bioutils.proteomics.net.sf.bioutils.proteomics.UtilFraction
net.sf.bioutils.proteomics.net.sf.bioutils.proteomics.UtilProteomics
net.sf.bioutils.proteomics.annotation
net.sf.bioutils.proteomics.annotation.net.sf.bioutils.proteomics.annotation.AnnotatableElement
net.sf.bioutils.proteomics.annotation.net.sf.bioutils.proteomics.annotation.AnnotatableElementProto
net.sf.bioutils.proteomics.annotation.net.sf.bioutils.proteomics.annotation.Annotation
net.sf.bioutils.proteomics.annotation.net.sf.bioutils.proteomics.annotation.AnnotationSerializable
net.sf.bioutils.proteomics.annotation.net.sf.bioutils.proteomics.annotation.ComparatorAnnotation
net.sf.bioutils.proteomics.annotation.net.sf.bioutils.proteomics.annotation.FactoryPeakAnnotatable
net.sf.bioutils.proteomics.annotation.net.sf.bioutils.proteomics.annotation.FeatureAnnotatable
net.sf.bioutils.proteomics.annotation.net.sf.bioutils.proteomics.annotation.PeakAnnotatable
net.sf.bioutils.proteomics.annotation.net.sf.bioutils.proteomics.annotation.package-info
net.sf.bioutils.proteomics.comparator
net.sf.bioutils.proteomics.comparator.net.sf.bioutils.proteomics.comparator.ComparatorIntensity
net.sf.bioutils.proteomics.comparator.net.sf.bioutils.proteomics.comparator.ComparatorSampleBySize
net.sf.bioutils.proteomics.comparator.net.sf.bioutils.proteomics.comparator.package-info
net.sf.bioutils.proteomics.digest
net.sf.bioutils.proteomics.digest.net.sf.bioutils.proteomics.digest.Digester
net.sf.bioutils.proteomics.digest.net.sf.bioutils.proteomics.digest.DigesterAbstract
net.sf.bioutils.proteomics.digest.net.sf.bioutils.proteomics.digest.DigesterTrypsin
net.sf.bioutils.proteomics.digest.net.sf.bioutils.proteomics.digest.package-info
net.sf.bioutils.proteomics.exception
net.sf.bioutils.proteomics.exception.net.sf.bioutils.proteomics.exception.ExceptionProteomics
net.sf.bioutils.proteomics.exception.net.sf.bioutils.proteomics.exception.ExceptionRuntimeProteomics
net.sf.bioutils.proteomics.exception.net.sf.bioutils.proteomics.exception.ExceptionUnknownAminoAcid
net.sf.bioutils.proteomics.feature
net.sf.bioutils.proteomics.feature.net.sf.bioutils.proteomics.feature.FactoryFeature
net.sf.bioutils.proteomics.feature.net.sf.bioutils.proteomics.feature.Feature
net.sf.bioutils.proteomics.feature.net.sf.bioutils.proteomics.feature.FeatureUnmodifiable
net.sf.bioutils.proteomics.feature.net.sf.bioutils.proteomics.feature.UtilFeature
net.sf.bioutils.proteomics.feature.net.sf.bioutils.proteomics.feature.package-info
net.sf.bioutils.proteomics.fraction
net.sf.bioutils.proteomics.fraction.net.sf.bioutils.proteomics.fraction.FactoryFraction
net.sf.bioutils.proteomics.fraction.net.sf.bioutils.proteomics.fraction.FactoryFractionBean
net.sf.bioutils.proteomics.fraction.net.sf.bioutils.proteomics.fraction.Fraction
net.sf.bioutils.proteomics.fraction.net.sf.bioutils.proteomics.fraction.FractionBean
net.sf.bioutils.proteomics.fraction.net.sf.bioutils.proteomics.fraction.package-info
net.sf.bioutils.proteomics.fragmentation
net.sf.bioutils.proteomics.fragmentation.net.sf.bioutils.proteomics.fragmentation.Fragmentator
net.sf.bioutils.proteomics.fragmentation.net.sf.bioutils.proteomics.fragmentation.FragmentatorImpl
net.sf.bioutils.proteomics.fragmentation.net.sf.bioutils.proteomics.fragmentation.package-info
net.sf.bioutils.proteomics.peak
net.sf.bioutils.proteomics.peak.net.sf.bioutils.proteomics.peak.ComparatorPeakByAnnotation
net.sf.bioutils.proteomics.peak.net.sf.bioutils.proteomics.peak.ComparatorPeakByIntensity
net.sf.bioutils.proteomics.peak.net.sf.bioutils.proteomics.peak.ComparatorPeakByMZ
net.sf.bioutils.proteomics.peak.net.sf.bioutils.proteomics.peak.EqualatorPeak
net.sf.bioutils.proteomics.peak.net.sf.bioutils.proteomics.peak.EqualatorPeakMZAbs
net.sf.bioutils.proteomics.peak.net.sf.bioutils.proteomics.peak.FactoryPeak
net.sf.bioutils.proteomics.peak.net.sf.bioutils.proteomics.peak.FactoryPeakImpl
net.sf.bioutils.proteomics.peak.net.sf.bioutils.proteomics.peak.FactoryPeakUnmodifiable
net.sf.bioutils.proteomics.peak.net.sf.bioutils.proteomics.peak.FilterPeakByFracNr
net.sf.bioutils.proteomics.peak.net.sf.bioutils.proteomics.peak.FilterPeakByFractionIndexRange
net.sf.bioutils.proteomics.peak.net.sf.bioutils.proteomics.peak.FilterPeakByIntensity
net.sf.bioutils.proteomics.peak.net.sf.bioutils.proteomics.peak.FilterPeakByMZ
net.sf.bioutils.proteomics.peak.net.sf.bioutils.proteomics.peak.FilterPeakByMZPpm
net.sf.bioutils.proteomics.peak.net.sf.bioutils.proteomics.peak.FilterPeakByMZRangeFracNrRange
net.sf.bioutils.proteomics.peak.net.sf.bioutils.proteomics.peak.FilterPeakByMzRange
net.sf.bioutils.proteomics.peak.net.sf.bioutils.proteomics.peak.FilterPeakBySignalToNoise
net.sf.bioutils.proteomics.peak.net.sf.bioutils.proteomics.peak.FilterPeakMaxInt
net.sf.bioutils.proteomics.peak.net.sf.bioutils.proteomics.peak.FilterPeakToString
net.sf.bioutils.proteomics.peak.net.sf.bioutils.proteomics.peak.FractionUnmodifiable
net.sf.bioutils.proteomics.peak.net.sf.bioutils.proteomics.peak.HashCalculatorPeak
net.sf.bioutils.proteomics.peak.net.sf.bioutils.proteomics.peak.Peak
net.sf.bioutils.proteomics.peak.net.sf.bioutils.proteomics.peak.PeakBean
net.sf.bioutils.proteomics.peak.net.sf.bioutils.proteomics.peak.PeakFractionated
net.sf.bioutils.proteomics.peak.net.sf.bioutils.proteomics.peak.PeakImpl
net.sf.bioutils.proteomics.peak.net.sf.bioutils.proteomics.peak.PeakModifiable
net.sf.bioutils.proteomics.peak.net.sf.bioutils.proteomics.peak.PeakToStringListTransformer
net.sf.bioutils.proteomics.peak.net.sf.bioutils.proteomics.peak.PeakUnmodifiable
net.sf.bioutils.proteomics.peak.net.sf.bioutils.proteomics.peak.SampleUnmodifiable
net.sf.bioutils.proteomics.peak.net.sf.bioutils.proteomics.peak.SelectorPeakClosestFracMz
net.sf.bioutils.proteomics.peak.net.sf.bioutils.proteomics.peak.SelectorPeakHighestInt
net.sf.bioutils.proteomics.peak.net.sf.bioutils.proteomics.peak.StringListToPeakTransformer
net.sf.bioutils.proteomics.peak.net.sf.bioutils.proteomics.peak.TransformerFractionToUnmodifiable
net.sf.bioutils.proteomics.peak.net.sf.bioutils.proteomics.peak.TransformerPeakToFractionNr
net.sf.bioutils.proteomics.peak.net.sf.bioutils.proteomics.peak.TransformerPeakToMass
net.sf.bioutils.proteomics.peak.net.sf.bioutils.proteomics.peak.TransformerPeakToUnmodifiable
net.sf.bioutils.proteomics.peak.net.sf.bioutils.proteomics.peak.UtilPeak
net.sf.bioutils.proteomics.peak.net.sf.bioutils.proteomics.peak.package-info
net.sf.bioutils.proteomics.peptides
net.sf.bioutils.proteomics.peptides.net.sf.bioutils.proteomics.peptides.AminoAcid
net.sf.bioutils.proteomics.peptides.net.sf.bioutils.proteomics.peptides.BIonChargedSingle
net.sf.bioutils.proteomics.peptides.net.sf.bioutils.proteomics.peptides.Modification
net.sf.bioutils.proteomics.peptides.net.sf.bioutils.proteomics.peptides.Peptide
net.sf.bioutils.proteomics.peptides.net.sf.bioutils.proteomics.peptides.PeptideSequenceAbstract
net.sf.bioutils.proteomics.peptides.net.sf.bioutils.proteomics.peptides.PeptideSequenceChargedSingle
net.sf.bioutils.proteomics.peptides.net.sf.bioutils.proteomics.peptides.PeptideSequenceModifiable
net.sf.bioutils.proteomics.peptides.net.sf.bioutils.proteomics.peptides.PeptideSequences
net.sf.bioutils.proteomics.peptides.net.sf.bioutils.proteomics.peptides.PeptideSequencesImpl
net.sf.bioutils.proteomics.peptides.net.sf.bioutils.proteomics.peptides.YIonChargedSingle
net.sf.bioutils.proteomics.peptides.net.sf.bioutils.proteomics.peptides.package-info
net.sf.bioutils.proteomics.peptidesearcher
net.sf.bioutils.proteomics.peptidesearcher.net.sf.bioutils.proteomics.peptidesearcher.DatabaseID
net.sf.bioutils.proteomics.peptidesearcher.net.sf.bioutils.proteomics.peptidesearcher.FactoryResult
net.sf.bioutils.proteomics.peptidesearcher.net.sf.bioutils.proteomics.peptidesearcher.PeptideSearcher
net.sf.bioutils.proteomics.peptidesearcher.net.sf.bioutils.proteomics.peptidesearcher.Result
net.sf.bioutils.proteomics.peptidesearcher.net.sf.bioutils.proteomics.peptidesearcher.package-info
net.sf.bioutils.proteomics.provider
net.sf.bioutils.proteomics.provider.net.sf.bioutils.proteomics.provider.ProviderFractionIndex
net.sf.bioutils.proteomics.provider.net.sf.bioutils.proteomics.provider.ProviderIntensity
net.sf.bioutils.proteomics.provider.net.sf.bioutils.proteomics.provider.ProviderMz
net.sf.bioutils.proteomics.provider.net.sf.bioutils.proteomics.provider.ProviderRetentionTime
net.sf.bioutils.proteomics.provider.net.sf.bioutils.proteomics.provider.ProviderSample
net.sf.bioutils.proteomics.provider.net.sf.bioutils.proteomics.provider.ProviderSampleName
net.sf.bioutils.proteomics.provider.net.sf.bioutils.proteomics.provider.package-info
net.sf.bioutils.proteomics.sample
net.sf.bioutils.proteomics.sample.net.sf.bioutils.proteomics.sample.EqualatorSample
net.sf.bioutils.proteomics.sample.net.sf.bioutils.proteomics.sample.FactorySample
net.sf.bioutils.proteomics.sample.net.sf.bioutils.proteomics.sample.FilterSampleByName
net.sf.bioutils.proteomics.sample.net.sf.bioutils.proteomics.sample.HashCalculatorSample
net.sf.bioutils.proteomics.sample.net.sf.bioutils.proteomics.sample.Sample
net.sf.bioutils.proteomics.sample.net.sf.bioutils.proteomics.sample.SampleBean
net.sf.bioutils.proteomics.sample.net.sf.bioutils.proteomics.sample.SampleGetMaxFrac
net.sf.bioutils.proteomics.sample.net.sf.bioutils.proteomics.sample.SampleHandler
net.sf.bioutils.proteomics.sample.net.sf.bioutils.proteomics.sample.SampleHandlerAbstract
net.sf.bioutils.proteomics.sample.net.sf.bioutils.proteomics.sample.SampleHandlerMultiIn
net.sf.bioutils.proteomics.sample.net.sf.bioutils.proteomics.sample.SampleHandlerMultiInVoid
net.sf.bioutils.proteomics.sample.net.sf.bioutils.proteomics.sample.SampleHandlerVoid
net.sf.bioutils.proteomics.sample.net.sf.bioutils.proteomics.sample.SampleModifiable
net.sf.bioutils.proteomics.sample.net.sf.bioutils.proteomics.sample.SampleView
net.sf.bioutils.proteomics.sample.net.sf.bioutils.proteomics.sample.SampleViews
net.sf.bioutils.proteomics.sample.net.sf.bioutils.proteomics.sample.SelectorSampleByBaseName
net.sf.bioutils.proteomics.sample.net.sf.bioutils.proteomics.sample.TransformerSampleToName
net.sf.bioutils.proteomics.sample.net.sf.bioutils.proteomics.sample.TrasformerSample2Fractions
net.sf.bioutils.proteomics.sample.net.sf.bioutils.proteomics.sample.UtilSample
net.sf.bioutils.proteomics.sample.net.sf.bioutils.proteomics.sample.ViewSample
net.sf.bioutils.proteomics.sample.net.sf.bioutils.proteomics.sample.ViewSampleProto
net.sf.bioutils.proteomics.sample.stats
net.sf.bioutils.proteomics.sample.stats.net.sf.bioutils.proteomics.sample.stats.FactorySampleStatistics
net.sf.bioutils.proteomics.sample.stats.net.sf.bioutils.proteomics.sample.stats.SampleStatistics
net.sf.bioutils.proteomics.sample.stats.net.sf.bioutils.proteomics.sample.stats.SampleStatisticsCalculatorFuture
net.sf.bioutils.proteomics.sample.stats.net.sf.bioutils.proteomics.sample.stats.SampleStatisticsCallable
net.sf.bioutils.proteomics.sample.stats.net.sf.bioutils.proteomics.sample.stats.package-info
net.sf.bioutils.proteomics.standard
net.sf.bioutils.proteomics.standard.net.sf.bioutils.proteomics.standard.FactoryStandard
net.sf.bioutils.proteomics.standard.net.sf.bioutils.proteomics.standard.Standard
net.sf.bioutils.proteomics.standard.net.sf.bioutils.proteomics.standard.package-info
net.sf.bioutils.proteomics.transformer
net.sf.bioutils.proteomics.transformer.net.sf.bioutils.proteomics.transformer.TransformerIntensityProviderDouble
net.sf.bioutils.proteomics.transformer.net.sf.bioutils.proteomics.transformer.TransformerPeakToIntensity
net.sf.bioutils.proteomics.transformer.net.sf.bioutils.proteomics.transformer.TransformerPeakToIntensityLog10
net.sf.bioutils.proteomics.transformer.net.sf.bioutils.proteomics.transformer.TransformerPeakToIntensityLog2
net.sf.bioutils.proteomics.transformer.net.sf.bioutils.proteomics.transformer.TransformerPeakToIntensityToNoise
net.sf.bioutils.proteomics.transformer.net.sf.bioutils.proteomics.transformer.TransformerPeakToSample
net.sf.bioutils.proteomics.transformer.net.sf.bioutils.proteomics.transformer.TransformerPeakToSampleName
net.sf.bioutils.proteomics.transformer.net.sf.bioutils.proteomics.transformer.TransformerToLog2
net.sf.bioutils.proteomics.transformer.net.sf.bioutils.proteomics.transformer.package-info
net.sf.bioutils.proteomics.view
net.sf.bioutils.proteomics.view.net.sf.bioutils.proteomics.view.FactoryViewPeakToFractionIndex
net.sf.bioutils.proteomics.view.net.sf.bioutils.proteomics.view.FactoryViewPeakToIntensity
net.sf.bioutils.proteomics.view.net.sf.bioutils.proteomics.view.ViewPeakToFractionIndex
net.sf.bioutils.proteomics.view.net.sf.bioutils.proteomics.view.ViewPeakToIntensity
net.sf.bioutils.proteomics.view.net.sf.bioutils.proteomics.view.package-info




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