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A modified version of some JGraph files
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/*
* Copyright (c) 2005-2006, David Benson
*
* All rights reserved.
*
* This file is licensed under the JGraph software license, a copy of which
* will have been provided to you in the file LICENSE at the root of your
* installation directory. If you are unable to locate this file please
* contact JGraph sales for another copy.
*/
package com.jgraph.layout.hierarchical.model;
import java.util.ArrayList;
import java.util.Collection;
import java.util.HashSet;
import java.util.Hashtable;
import java.util.Iterator;
import java.util.LinkedHashMap;
import java.util.LinkedHashSet;
import java.util.LinkedList;
import java.util.List;
import java.util.Map;
import java.util.Set;
import com.jgraph.layout.JGraphFacade;
import com.jgraph.layout.JGraphFacade.CellVisitor;
/**
* Internal model of a hierarchical graph. This model stores nodes and edges
* equivalent to the real graph nodes and edges, but also stores the rank of the
* cells, the order within the ranks and the new candidate locations of cells.
* The internal model also reverses edge direction were appropriate , ignores
* self-loop and groups parallels together under one edge object.
*/
public class JGraphHierarchyModel {
/**
* Whether the rank assignment is done from the sinks or sources.
*/
protected boolean scanRanksFromSinks = true;
/**
* Stores the largest rank number allocated
*/
public int maxRank;
/**
* Map from graph vertices to internal model nodes
*/
protected Map vertexMapper = null;
/**
* Map from graph edges to internal model edges
*/
protected Map edgeMapper = null;
/**
* Mapping from rank number to actual rank
*/
public Map ranks = null;
/**
* Store of roots of this hierarchy model, these are real graph cells, not
* internal cells
*/
public Object[] roots = null;
/**
* Count of the number of times the ancestor dfs has been used
*/
protected int dfsCount = 0;
/**
* Whether or not cells are ordered according to the order in the graph
* model. Defaults to false since sorting usually produces quadratic
* performance. Note that since JGraph 6 returns edges in a deterministic
* order, it might be that this layout is always deterministic using that
* JGraph regardless of this flag setting (i.e. leave it false in that case)
*/
protected boolean deterministic = false;
/** High value to start source layering scan rank value from */
private final int SOURCESCANSTARTRANK = 100000000;
/**
* Constructor with no parameters creates a default model
*
* @param facade
* the facade of the graph to be laid out
*/
public JGraphHierarchyModel(JGraphFacade facade) {
this(facade, facade.getVertices().toArray(), false, false, true);
}
/**
* Creates an internal ordered graph model using the vertices passed in. If
* there are any, leftward edge need to be inverted in the internal model
*
* @param facade
* the facade describing the graph to be operated on
* @param vertices
* the vertices for this hierarchy
* @param ordered
* whether or not the vertices are already ordered
* @param deterministic
* whether or not this layout should be deterministic on each
* usage
* @param scanRanksFromSinks
* Whether the rank assignment is done from the sinks or sources.
*/
public JGraphHierarchyModel(JGraphFacade facade, Object[] vertices,
boolean ordered, boolean deterministic, boolean scanRanksFromSinks) {
this.deterministic = deterministic;
this.scanRanksFromSinks = scanRanksFromSinks;
roots = facade.getRoots().toArray();
if (ordered) {
formOrderedHierarchy(facade, vertices);
} else {
if (vertices == null) {
vertices = facade.getVertices().toArray();
}
// map of cells to internal cell needed for second run through
// to setup the sink of edges correctly. Guess size by number
// of edges is roughly same as number of vertices.
vertexMapper = new Hashtable(vertices.length);
edgeMapper = new Hashtable(vertices.length);
if (scanRanksFromSinks) {
maxRank = 0;
} else {
maxRank = SOURCESCANSTARTRANK;
}
JGraphHierarchyNode[] internalVertices = new JGraphHierarchyNode[vertices.length];
createInternalCells(facade, vertices, internalVertices);
// Go through edges set their sink values. Also check the
// ordering if and invert edges if necessary
for (int i = 0; i < vertices.length; i++) {
Collection edges = internalVertices[i].connectsAsSource;
Iterator iter = edges.iterator();
while (iter.hasNext()) {
JGraphHierarchyEdge internalEdge = (JGraphHierarchyEdge) iter
.next();
Collection realEdges = internalEdge.edges;
Iterator iter2 = realEdges.iterator();
if (iter2.hasNext()) {
Object realEdge = iter2.next();
Object targetCell = facade.getTarget(realEdge);
JGraphHierarchyNode internalTargetCell = (JGraphHierarchyNode) vertexMapper
.get(targetCell);
if (internalTargetCell != null
&& internalVertices[i] != internalTargetCell) {
internalEdge.target = internalTargetCell;
if (internalTargetCell.connectsAsTarget.size() == 0) {
internalTargetCell.connectsAsTarget = new LinkedHashSet(
4);
}
internalTargetCell.connectsAsTarget
.add(internalEdge);
}
}
}
// Use the temp variable in the internal nodes to mark this
// internal vertex as having been visited.
internalVertices[i].temp[0] = 1;
}
}
}
/**
* Creates an internal ordered graph model using the vertices passed in. If
* there are any, leftward edge need to be inverted in the internal model
*
* @param facade
* the facade describing the graph to be operated on
* @param vertices
* the vertices to be laid out
*/
public void formOrderedHierarchy(JGraphFacade facade, Object[] vertices) {
if (vertices == null) {
vertices = facade.getVertices().toArray();
}
// map of cells to internal cell needed for second run through
// to setup the sink of edges correctly. Guess size by number
// of edges is roughly same as number of vertices.
vertexMapper = new Hashtable(vertices.length * 2);
edgeMapper = new Hashtable(vertices.length);
maxRank = 0;
JGraphHierarchyNode[] internalVertices = new JGraphHierarchyNode[vertices.length];
createInternalCells(facade, vertices, internalVertices);
// Go through edges set their sink values. Also check the
// ordering if and invert edges if necessary
// Need a temporary list to store which of these edges have been
// inverted in the internal model. If connectsAsSource were changed
// in the following while loop we'd get a
// ConcurrentModificationException
List tempList = new ArrayList();
for (int i = 0; i < vertices.length; i++) {
Collection edges = internalVertices[i].connectsAsSource;
Iterator iter = edges.iterator();
while (iter.hasNext()) {
JGraphHierarchyEdge internalEdge = (JGraphHierarchyEdge) iter
.next();
Collection realEdges = internalEdge.edges;
Iterator iter2 = realEdges.iterator();
if (iter2.hasNext()) {
Object realEdge = iter2.next();
Object targetCell = facade.getTarget(realEdge);
JGraphHierarchyNode internalTargetCell = (JGraphHierarchyNode) vertexMapper
.get(targetCell);
if (internalTargetCell != null
&& internalVertices[i] != internalTargetCell) {
internalEdge.target = internalTargetCell;
if (internalTargetCell.connectsAsTarget.size() == 0) {
internalTargetCell.connectsAsTarget = new ArrayList(
4);
}
// The vertices passed in were ordered, check that the
// target cell has not already been marked as visited
if (internalTargetCell.temp[0] == 1) {
// Internal Edge is leftward, reverse it
internalEdge.invert();
// There must be a connectsAsSource list already
internalTargetCell.connectsAsSource
.add(internalEdge);
tempList.add(internalEdge);
internalVertices[i].connectsAsTarget
.add(internalEdge);
} else {
internalTargetCell.connectsAsTarget
.add(internalEdge);
}
}
}
}
// Remove the inverted edges as sources from this node
Iterator iter2 = tempList.iterator();
while (iter2.hasNext()) {
internalVertices[i].connectsAsSource.remove(iter2.next());
}
tempList.clear();
// Use the temp variable in the internal nodes to mark this
// internal vertex as having been visited.
internalVertices[i].temp[0] = 1;
}
}
/**
* Creates all edges in the internal model
*
* @param facade
* the facade desrcibing the graph to be laid out
* @param vertices
* the vertices whom are to have an internal representation
* created
* @param internalVertices
* the blank internal vertices to have their information filled
* in using the real vertices
*/
protected void createInternalCells(JGraphFacade facade, Object[] vertices,
JGraphHierarchyNode[] internalVertices) {
// Create internal edges
for (int i = 0; i < vertices.length; i++) {
internalVertices[i] = new JGraphHierarchyNode(vertices[i]);
vertexMapper.put(vertices[i], internalVertices[i]);
// If the layout is deterministic, order the cells
List outgoingCells = facade.getNeighbours(vertices[i],
deterministic);
internalVertices[i].connectsAsSource = new LinkedHashSet(
outgoingCells.size());
// Create internal edges, but don't do any rank assignment yet
// First use the information from the greedy cycle remover to
// invert the leftward edges internally
Iterator iter = outgoingCells.iterator();
while (iter.hasNext()) {
// Don't add self-loops
Object cell = iter.next();
if (cell != vertices[i] && facade.isVertex(cell)) {
// Allow for parallel edges
Object[] edges = facade.getEdgesBetween(vertices[i], cell,
true);
if (edges != null && edges.length > 0) {
ArrayList listEdges = new ArrayList(edges.length);
for (int j = 0; j < edges.length; j++) {
listEdges.add(edges[j]);
}
JGraphHierarchyEdge internalEdge = new JGraphHierarchyEdge(
listEdges);
Iterator iter2 = listEdges.iterator();
while (iter2.hasNext()) {
edgeMapper.put(iter2.next(), internalEdge);
}
internalEdge.source = internalVertices[i];
internalVertices[i].connectsAsSource.add(internalEdge);
}
}
}
// Ensure temp variable is cleared from any previous use
internalVertices[i].temp[0] = 0;
}
}
/**
* Basic determination of minimum layer ranking by working from from sources
* or sinks and working through each node in the relevant edge direction.
* Starting at the sinks is basically a longest path layering algorithm.
*
*/
public void initialRank() {
Collection internalNodes = vertexMapper.values();
LinkedList startNodes = new LinkedList();
if (!scanRanksFromSinks && roots != null) {
for (int i = 0; i < roots.length; i++) {
Object internalNode = vertexMapper.get(roots[i]);
if (internalNode != null) {
startNodes.add(internalNode);
}
}
}
if (scanRanksFromSinks) {
Iterator iter = internalNodes.iterator();
while (iter.hasNext()) {
JGraphHierarchyNode internalNode = (JGraphHierarchyNode) iter
.next();
if (internalNode.connectsAsSource == null
|| internalNode.connectsAsSource.isEmpty()) {
startNodes.add(internalNode);
}
}
}
if (startNodes.isEmpty()) {
// Start list from sources
Iterator iter = internalNodes.iterator();
while (iter.hasNext()) {
JGraphHierarchyNode internalNode = (JGraphHierarchyNode) iter
.next();
if (internalNode.connectsAsTarget == null
|| internalNode.connectsAsTarget.isEmpty()) {
startNodes.add(internalNode);
}
}
}
Iterator iter = internalNodes.iterator();
while (iter.hasNext()) {
JGraphHierarchyNode internalNode = (JGraphHierarchyNode) iter
.next();
// Mark the node as not having had a layer assigned
internalNode.temp[0] = -1;
}
List startNodesCopy = new ArrayList(startNodes);
while (!startNodes.isEmpty()) {
JGraphHierarchyNode internalNode = (JGraphHierarchyNode) startNodes
.getFirst();
Collection layerDeterminingEdges;
Collection edgesToBeMarked;
if (scanRanksFromSinks) {
layerDeterminingEdges = internalNode.connectsAsSource;
edgesToBeMarked = internalNode.connectsAsTarget;
} else {
layerDeterminingEdges = internalNode.connectsAsTarget;
edgesToBeMarked = internalNode.connectsAsSource;
}
// flag to keep track of whether or not all layer determining
// edges have been scanned
boolean allEdgesScanned = true;
// Work out the layer of this node from the layer determining
// edges
Iterator iter2 = layerDeterminingEdges.iterator();
// The minimum layer number of any node connected by one of
// the layer determining edges variable. If we are starting
// from sources, need to start at some huge value and
// normalise down afterwards
int minimumLayer = 0;
if (!scanRanksFromSinks) {
minimumLayer = SOURCESCANSTARTRANK;
}
while (allEdgesScanned && iter2.hasNext()) {
JGraphHierarchyEdge internalEdge = (JGraphHierarchyEdge) iter2
.next();
if (internalEdge.temp[0] == 5270620) {
// This edge has been scanned, get the layer of the
// node on the other end
JGraphHierarchyNode otherNode;
if (scanRanksFromSinks) {
otherNode = internalEdge.target;
} else {
otherNode = internalEdge.source;
}
if (scanRanksFromSinks) {
minimumLayer = Math.max(minimumLayer,
otherNode.temp[0] + 1);
} else {
minimumLayer = Math.min(minimumLayer,
otherNode.temp[0] - 1);
}
} else {
allEdgesScanned = false;
}
}
// If all edge have been scanned, assign the layer, mark all
// edges in the other direction and remove from the nodes list
if (allEdgesScanned) {
internalNode.temp[0] = minimumLayer;
if (scanRanksFromSinks) {
maxRank = Math.max(maxRank, minimumLayer);
} else {
maxRank = Math.min(maxRank, minimumLayer);
}
if (edgesToBeMarked != null) {
Iterator iter3 = edgesToBeMarked.iterator();
while (iter3.hasNext()) {
JGraphHierarchyEdge internalEdge = (JGraphHierarchyEdge) iter3
.next();
// Assign unique stamp ( y/m/d/h )
internalEdge.temp[0] = 5270620;
// Add node on other end of edge to LinkedList of
// nodes
// to be analysed
JGraphHierarchyNode otherNode;
if (scanRanksFromSinks) {
otherNode = internalEdge.source;
} else {
otherNode = internalEdge.target;
}
// Only add node if it hasn't been assigned a layer
if (otherNode.temp[0] == -1) {
startNodes.addLast(otherNode);
// Mark this other node as neither being
// unassigned nor assigned so it isn't
// added to this list again, but it's
// layer isn't used in any calculation.
otherNode.temp[0] = -2;
}
}
}
startNodes.removeFirst();
} else {
// Not all the edges have been scanned, get to the back of
// the class and put the dunces cap on
Object removedCell = startNodes.removeFirst();
startNodes.addLast(internalNode);
if (removedCell == internalNode && startNodes.size() == 1) {
// This is an error condition, we can't get out of
// this loop. It could happen for more than one node
// but that's a lot harder to detect. Log the error
// TODO make log comment
break;
}
}
}
if (scanRanksFromSinks) {
// Tighten the rank 0 nodes as far as possible
for (int i = 0; i < startNodesCopy.size(); i++) {
JGraphHierarchyNode internalNode = (JGraphHierarchyNode) startNodesCopy
.get(i);
int currentMinLayer = 1000000;
Collection layerDeterminingEdges = internalNode.connectsAsTarget;
Iterator iter2 = layerDeterminingEdges.iterator();
while (iter2.hasNext()) {
JGraphHierarchyEdge internalEdge = (JGraphHierarchyEdge) iter2
.next();
JGraphHierarchyNode otherNode = internalEdge.source;
internalNode.temp[0] = Math.min(currentMinLayer,
otherNode.temp[0] - 1);
currentMinLayer = internalNode.temp[0];
}
}
} else {
// Normalize the ranks down from their large starting value to place
// at least 1 sink on layer 0
iter = internalNodes.iterator();
while (iter.hasNext()) {
JGraphHierarchyNode internalNode = (JGraphHierarchyNode) iter
.next();
// Mark the node as not having had a layer assigned
internalNode.temp[0] -= maxRank;
}
// Reset the maxRank to that which would be expected for a from-sink
// scan
maxRank = SOURCESCANSTARTRANK - maxRank;
}
}
/**
* Fixes the layer assignments to the values stored in the nodes. Also needs
* to create dummy nodes for edges that cross layers.
*/
public void fixRanks() {
final Collection[] rankList = new JGraphHierarchyRank[maxRank + 1];
ranks = new LinkedHashMap(maxRank + 1);
for (int i = 0; i < maxRank + 1; i++) {
rankList[i] = new JGraphHierarchyRank();
ranks.put(new Integer(i), rankList[i]);
}
// Perform a DFS to obtain an initial ordering for each rank.
// Without doing this you would end up having to process
// crossings for a standard tree.
Object rootsArray[] = null;
if (roots != null) {
rootsArray = new Object[roots.length];
for (int i = 0; i < roots.length; i++) {
Object node = roots[i];
JGraphHierarchyNode internalNode = (JGraphHierarchyNode) vertexMapper
.get(node);
rootsArray[i] = internalNode;
}
}
dfs(new JGraphFacade.CellVisitor() {
public void visit(Object parent, Object cell,
Object connectingEdge, int layer, int seen) {
JGraphHierarchyNode node = (JGraphHierarchyNode) cell;
if (seen == 0 && node.maxRank < 0 && node.minRank < 0) {
rankList[node.temp[0]].add(cell);
node.maxRank = node.temp[0];
node.minRank = node.temp[0];
// Set temp[0] to the nodes position in the rank
node.temp[0] = rankList[node.maxRank].size() - 1;
}
if (parent != null && connectingEdge != null) {
int parentToCellRankDifference = ((JGraphHierarchyNode) parent).maxRank
- node.maxRank;
if (parentToCellRankDifference > 1) {
// There are ranks in between the parent and current
// cell
JGraphHierarchyEdge edge = (JGraphHierarchyEdge) connectingEdge;
edge.maxRank = ((JGraphHierarchyNode) parent).maxRank;
edge.minRank = ((JGraphHierarchyNode) cell).maxRank;
edge.temp = new int[parentToCellRankDifference - 1];
edge.x = new double[parentToCellRankDifference - 1];
edge.y = new double[parentToCellRankDifference - 1];
for (int i = edge.minRank + 1; i < edge.maxRank; i++) {
// The connecting edge must be added to the
// appropriate
// ranks
rankList[i].add(edge);
edge.setGeneralPurposeVariable(i, rankList[i]
.size() - 1);
}
}
}
}
}, rootsArray, false, null);
}
/**
* A depth first search through the internal heirarchy model
*
* @param visitor
* the visitor pattern to be called for each node
* @param trackAncestors
* whether or not the search is to keep track all nodes directly
* above this one in the search path
*/
public void dfs(CellVisitor visitor, Object[] dfsRoots,
boolean trackAncestors, Set seenNodes) {
// Run dfs through on all roots
if (dfsRoots != null) {
for (int i = 0; i < dfsRoots.length; i++) {
JGraphHierarchyNode internalNode = (JGraphHierarchyNode) dfsRoots[i];
if (internalNode != null) {
if (seenNodes == null) {
seenNodes = new HashSet();
}
if (trackAncestors) {
// Set up hash code for root
internalNode.hashCode = new int[2];
internalNode.hashCode[0] = dfsCount;
internalNode.hashCode[1] = i;
dfs(null, internalNode, null, visitor, seenNodes,
internalNode.hashCode, i, 0);
} else {
dfs(null, internalNode, null, visitor, seenNodes, 0);
}
}
}
dfsCount++;
}
}
/**
* Performs a depth first search on the internal hierarchy model
*
* @param parent
* the parent internal node of the current internal node
* @param root
* the current internal node
* @param connectingEdge
* the internal edge connecting the internal node and the parent
* internal node, if any
* @param visitor
* the visitor pattern to be called for each node
* @param seen
* a set of all nodes seen by this dfs a set of all of the
* ancestor node of the current node
* @param layer
* the layer on the dfs tree ( not the same as the model ranks )
*/
public void dfs(JGraphHierarchyNode parent, JGraphHierarchyNode root,
JGraphHierarchyEdge connectingEdge, CellVisitor visitor, Set seen,
int layer) {
if (root != null) {
if (!seen.contains(root)) {
visitor.visit(parent, root, connectingEdge, layer, 0);
seen.add(root);
// Copy the connects as source list so that visitors
// can change the original for edge direction inversions
final Object[] outgoingEdges = root.connectsAsSource.toArray();
for (int i = 0; i < outgoingEdges.length; i++) {
JGraphHierarchyEdge internalEdge = (JGraphHierarchyEdge) outgoingEdges[i];
JGraphHierarchyNode targetNode = internalEdge.target;
// Root check is O(|roots|)
dfs(root, targetNode, internalEdge, visitor, seen,
layer + 1);
}
} else {
// Use the int field to indicate this node has been seen
visitor.visit(parent, root, connectingEdge, layer, 1);
}
}
}
/**
* Performs a depth first search on the internal hierarchy model. This dfs
* extends the default version by keeping track of cells ancestors, but it
* should be only used when necessary because of it can be computationally
* intensive for deep searches.
*
* @param parent
* the parent internal node of the current internal node
* @param root
* the current internal node
* @param connectingEdge
* the internal edge connecting the internal node and the parent
* internal node, if any
* @param visitor
* the visitor pattern to be called for each node
* @param seen
* a set of all nodes seen by this dfs
* @param ancestors
* the parent hash code
* @param childHash
* the new hash code for this node
* @param layer
* the layer on the dfs tree ( not the same as the model ranks )
*/
public void dfs(JGraphHierarchyNode parent, JGraphHierarchyNode root,
JGraphHierarchyEdge connectingEdge, CellVisitor visitor, Set seen,
int[] ancestors, int childHash, int layer) {
// Explaination of custom hash set.
// Previously, the ancestors variable was passed through the dfs as a
// HashSet.
// The ancestors were copied into a new HashSet and when the new child
// was
// processed it was also added to the set. If the current node was in
// its
// ancestor list it meant there is a cycle in the graph and this
// information is passed to the visitor.visit() in the seen parameter.
// The HashSet clone was very expensive on CPU so a custom hash was
// developed using primitive types. temp[] couldn't be used so
// hashCode[] was
// added to each node. Each new child adds another int to the array,
// copying
// the prefix from its parent. Child of the same parent add different
// ints
// (the limit is therefore 2^32 children per parent...). If a node has a
// child with the hashCode already set then the child code is compared
// to the
// same portion of the current nodes array. If they match there is a
// loop.
// Note that the basic mechanism would only allow for 1 use of this
// functionality, so the root nodes have two ints. The second int is
// incremented
// through each node root and the first is incremented through each run
// of the
// dfs algorithmn (therefore the dfs is not thread safe). The hash code
// of each
// node is set if not already set, or if the first int does not match
// that of
// the current run.
if (root != null) {
if (parent != null) {
// Form this nodes hash code if necessary, that is, if the
// hashCode variable has not been initialised or if the
// start of the parent hash code does not equal the start of
// this nodes hash code, indicating the code was set on a
// previous run of this dfs.
if (root.hashCode == null
|| root.hashCode[0] != parent.hashCode[0]) {
int hashCodeLength = parent.hashCode.length + 1;
root.hashCode = new int[hashCodeLength];
System.arraycopy(parent.hashCode, 0, root.hashCode, 0,
parent.hashCode.length);
root.hashCode[hashCodeLength - 1] = childHash;
}
}
if (!seen.contains(root)) {
visitor.visit(parent, root, connectingEdge, layer, 0);
seen.add(root);
// Copy the connects as source list so that visitors
// can change the original for edge direction inversions
final Object[] outgoingEdges = root.connectsAsSource.toArray();
for (int i = 0; i < outgoingEdges.length; i++) {
JGraphHierarchyEdge internalEdge = (JGraphHierarchyEdge) outgoingEdges[i];
JGraphHierarchyNode targetNode = internalEdge.target;
// Root check is O(|roots|)
dfs(root, targetNode, internalEdge, visitor, seen,
root.hashCode, i, layer + 1);
}
} else {
// Use the int field to indicate this node has been seen
visitor.visit(parent, root, connectingEdge, layer, 1);
}
}
}
/**
* @return Returns the vertexMapping.
*/
public Map getVertexMapping() {
if (vertexMapper == null) {
vertexMapper = new Hashtable();
}
return vertexMapper;
}
/**
* @param vertexMapping
* The vertexMapping to set.
*/
public void setVertexMapping(Map vertexMapping) {
this.vertexMapper = vertexMapping;
}
/**
* @return Returns the edgeMapper.
*/
public Map getEdgeMapper() {
return edgeMapper;
}
/**
* @param edgeMapper
* The edgeMapper to set.
*/
public void setEdgeMapper(Map edgeMapper) {
this.edgeMapper = edgeMapper;
}
/**
* @return Returns the dfsCount.
*/
public int getDfsCount() {
return dfsCount;
}
/**
* @param dfsCount
* The dfsCount to set.
*/
public void setDfsCount(int dfsCount) {
this.dfsCount = dfsCount;
}
/**
* @return Returns the deterministic.
*/
public boolean isDeterministic() {
return deterministic;
}
/**
* @param deterministic
* The deterministic to set.
*/
public void setDeterministic(boolean deterministic) {
this.deterministic = deterministic;
}
public boolean isSinksAtLayerZero() {
return scanRanksFromSinks;
}
public void setSinksAtLayerZero(boolean sinksAtLayerZero) {
this.scanRanksFromSinks = sinksAtLayerZero;
}
}
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