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JSci is a set of open source Java packages. The aim is to encapsulate scientific methods/principles in the most natural way possible. As such they should greatly aid the development of scientific based software. It offers: abstract math interfaces, linear algebra (support for various matrix and vector types), statistics (including probability distributions), wavelets, newtonian mechanics, chart/graph components (AWT and Swing), MathML DOM implementation, ... Note: some packages, like javax.comm, for the astro and instruments package aren't listed as dependencies (not available).

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package JSci.mathml;

import org.w3c.dom.*;
import org.w3c.dom.mathml.*;

/**
 * Implements a MathML presentation container.
 * @version 1.0
 * @author Mark Hale
 */
public class MathMLPresentationContainerImpl extends MathMLElementImpl implements MathMLPresentationContainer {
        /**
         * Constructs a MathML presentation container.
         */
        public MathMLPresentationContainerImpl(MathMLDocumentImpl owner, String qualifiedName) {
                super (owner, qualifiedName);
        }

        public int getNArguments() {
                return getArgumentsGetLength();
        }
        public MathMLNodeList getArguments() {
                return new MathMLNodeList() {
                        public int getLength() {
                                return getArgumentsGetLength();
                        }
                        public Node item(int index) {
                                return getArgumentsItem(index);
                        }
                };
        }
        public MathMLNodeList getDeclarations() {
                return new MathMLNodeList() {
                        public int getLength() {
                                return getDeclarationsGetLength();
                        }
                        public Node item(int index) {
                                return getDeclarationsItem(index);
                        }
                };
        }

        public MathMLElement getArgument(int index) throws DOMException {
                Node arg = getArgumentsItem(index-1);
                if (arg == null) {
                        throw new DOMException(DOMException.INDEX_SIZE_ERR, "Index out of bounds");
                }
                return (MathMLElement) arg;
        }
        public MathMLElement setArgument(MathMLElement newArgument, int index) throws DOMException {
                final int argsLength = getArgumentsGetLength();

                if ((index < 1) || (index > argsLength+1)) {
                        throw new DOMException(DOMException.INDEX_SIZE_ERR, "Index out of bounds");
                }
                if (index == argsLength+1) {
                        return (MathMLElement) appendChild(newArgument);
                } else {
                        return (MathMLElement) replaceChild(newArgument, getArgumentsItem(index-1));
                }
        }
        public MathMLElement insertArgument(MathMLElement newArgument, int index) throws DOMException {
                final int argsLength = getArgumentsGetLength();

                if ((index < 0) || (index > argsLength+1)) {
                        throw new DOMException(DOMException.INDEX_SIZE_ERR, "Index out of bounds");
                }
                if ((index == 0) || (index == argsLength+1)) {
                        return (MathMLElement) appendChild(newArgument);
                } else {
                        return (MathMLElement) insertBefore(newArgument, getArgumentsItem(index-1));
                }
        }
        public MathMLElement removeArgument(int index) throws DOMException {
                Node arg = getArgumentsItem(index-1);
                if (arg == null) {
                        throw new DOMException(DOMException.INDEX_SIZE_ERR, "Index out of bounds");
                }
                return (MathMLElement) removeChild(arg);
        }
        public void deleteArgument(int index) throws DOMException {
                removeArgument(index);
        }

        public MathMLDeclareElement getDeclaration(int index) throws DOMException {
                Node decl = getDeclarationsItem(index-1);
                if (decl == null) {
                        throw new DOMException(DOMException.INDEX_SIZE_ERR, "Index out of bounds");
                }
                return (MathMLDeclareElement) decl;
        }
        public MathMLDeclareElement setDeclaration(MathMLDeclareElement newDeclaration, int index) throws DOMException {
                final int declsLength = getDeclarationsGetLength();

                if ((index < 1) || (index > declsLength+1)) {
                        throw new DOMException(DOMException.INDEX_SIZE_ERR, "Index out of bounds");
                }
                if (index == declsLength+1) {
                        return (MathMLDeclareElement) appendChild(newDeclaration);
                } else {
                        return (MathMLDeclareElement) replaceChild(newDeclaration, getDeclarationsItem(index-1));
                }
        }
        public MathMLDeclareElement insertDeclaration(MathMLDeclareElement newDeclaration, int index) throws DOMException {
                final int declsLength = getDeclarationsGetLength();

                if ((index < 0) || (index > declsLength+1)) {
                        throw new DOMException(DOMException.INDEX_SIZE_ERR, "Index out of bounds");
                }
                if ((index == 0) || (index == declsLength+1)) {
                        return (MathMLDeclareElement) appendChild(newDeclaration);
                } else {
                        return (MathMLDeclareElement) insertBefore(newDeclaration, getDeclarationsItem(index-1));
                }
        }
        public MathMLDeclareElement removeDeclaration(int index) throws DOMException {
                Node decl = getDeclarationsItem(index-1);
                if (decl == null) {
                        throw new DOMException(DOMException.INDEX_SIZE_ERR, "Index out of bounds");
                }
                return (MathMLDeclareElement) removeChild(decl);
        }
        public void deleteDeclaration(int index) throws DOMException {
                removeDeclaration(index);
        }

        private int getArgumentsGetLength() {
                final int length = getLength();
                int numArgs = 0;

                for (int i = 0; i < length; i++) {
                        if (!(item(i) instanceof MathMLDeclareElement)) {
                                numArgs++;
                        }
                }
                return numArgs;
        }
        private Node getArgumentsItem(int index) {
                final int argsLength = getArgumentsGetLength();

                if ((index < 0) || (index >= argsLength))
                        return null;

                Node node = null;
                int n = -1;
                for (int i = 0; n < index; i++) {
                        node = item(i);
                        if (!(node instanceof MathMLDeclareElement)) {
                                n++;
                        }
                }
                return node;
        }

        private int getDeclarationsGetLength() {
                final int length = getLength();
                int numDecls = 0;

                for (int i = 0; i < length; i++) {
                        if (item(i) instanceof MathMLDeclareElement) {
                                numDecls++;
                        }
                }
                return numDecls;
        }
        private Node getDeclarationsItem(int index) {
                final int declLength = getDeclarationsGetLength();

                if ((index < 0) || (index >= declLength))
                        return null;

                Node node = null;
                int n = -1;
                for (int i = 0; n < index; i++) {
                        node = item(i);
                        if (node instanceof MathMLDeclareElement) {
                                n++;
                        }
                }
                return node;
        }
}





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