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HermiT is reasoner for ontologies written using the Web Ontology Language (OWL). Given an OWL file, HermiT can determine whether or not the ontology is consistent, identify subsumption relationships between classes, and much more.
This is the maven build of HermiT and is designed for people who wish to use HermiT from within the OWL API. It is now versioned in the main HermiT version repository, although not officially supported by the HermiT developers.
The version number of this package is a composite of the HermiT version and a value representing the OWLAPI release it is compatible with. Note that the group id for the upstream HermiT is com.hermit-reasoner, while this fork is released under net.sourceforge.owlapi.
This fork exists to allow HermiT users to use newer OWLAPI versions than the ones supported by the original HermiT codebase.
This package includes the Jautomata library (http://jautomata.sourceforge.net/), and builds with it directly. This library appears to be no longer under active development, and so a "fork" seems appropriate. No development is intended or anticipated on this code base.
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/* Copyright 2008, 2009, 2010 by the Oxford University Computing Laboratory
This file is part of HermiT.
HermiT is free software: you can redistribute it and/or modify
it under the terms of the GNU Lesser General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.
HermiT is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU Lesser General Public License for more details.
You should have received a copy of the GNU Lesser General Public License
along with HermiT. If not, see .
*/
package org.semanticweb.HermiT.tableau;
import java.io.Serializable;
import java.util.Collection;
import org.semanticweb.HermiT.model.AnnotatedEquality;
import org.semanticweb.HermiT.model.AtomicConcept;
import org.semanticweb.HermiT.model.AtomicRole;
import org.semanticweb.HermiT.model.Concept;
import org.semanticweb.HermiT.model.DLPredicate;
import org.semanticweb.HermiT.model.DataRange;
import org.semanticweb.HermiT.model.DescriptionGraph;
import org.semanticweb.HermiT.model.Equality;
import org.semanticweb.HermiT.model.InternalDatatype;
import org.semanticweb.HermiT.model.InverseRole;
import org.semanticweb.HermiT.model.Role;
import org.semanticweb.HermiT.monitor.TableauMonitor;
import gnu.trove.map.hash.TIntObjectHashMap;
/**ExtensionManager.*/
public final class ExtensionManager implements Serializable {
private static final long serialVersionUID=5900300914631070591L;
protected final Tableau m_tableau;
protected final TableauMonitor m_tableauMonitor;
protected final DependencySetFactory m_dependencySetFactory;
protected final TIntObjectHashMap m_extensionTablesByArity;
protected final ExtensionTable[] m_allExtensionTablesArray;
protected final ExtensionTable m_binaryExtensionTable;
protected final ExtensionTable m_ternaryExtensionTable;
protected final Object[] m_binaryAuxiliaryTupleContains;
protected final Object[] m_binaryAuxiliaryTupleAdd;
protected final Object[] m_ternaryAuxiliaryTupleContains;
protected final Object[] m_ternaryAuxiliaryTupleAdd;
protected final Object[] m_fouraryAuxiliaryTupleContains;
protected final Object[] m_fouraryAuxiliaryTupleAdd;
protected PermanentDependencySet m_clashDependencySet;
protected boolean m_addActive;
/**
* @param tableau tableau
*/
public ExtensionManager(Tableau tableau) {
m_tableau=tableau;
m_tableauMonitor=m_tableau.m_tableauMonitor;
m_dependencySetFactory=m_tableau.m_dependencySetFactory;
m_extensionTablesByArity=new TIntObjectHashMap<>();
m_binaryExtensionTable=
new ExtensionTableWithTupleIndexes(m_tableau,2,!m_tableau.isDeterministic(),
new TupleIndex[] {
new TupleIndex(new int[] { 1,0 }),
new TupleIndex(new int[] { 0,1 })
}
) {
private static final long serialVersionUID=1462821385000191875L;
@Override
public boolean isTupleActive(Object[] tuple) {
return ((Node)tuple[1]).isActive();
}
@Override
public boolean isTupleActive(int tupleIndex) {
return ((Node)m_tupleTable.getTupleObject(tupleIndex,1)).isActive();
}
};
m_extensionTablesByArity.put(2,m_binaryExtensionTable);
m_ternaryExtensionTable=
new ExtensionTableWithTupleIndexes(m_tableau,3,!m_tableau.isDeterministic(),
new TupleIndex[] {
new TupleIndex(new int[] { 0,1,2 }),
new TupleIndex(new int[] { 1,2,0 }),
new TupleIndex(new int[] { 2,0,1 })
}
) {
private static final long serialVersionUID=-731201626401421877L;
@Override
public boolean isTupleActive(Object[] tuple) {
return ((Node)tuple[1]).isActive() && ((Node)tuple[2]).isActive();
}
@Override
public boolean isTupleActive(int tupleIndex) {
return ((Node)m_tupleTable.getTupleObject(tupleIndex,1)).isActive()
&& ((Node)m_tupleTable.getTupleObject(tupleIndex,2)).isActive();
}
};
m_extensionTablesByArity.put(3,m_ternaryExtensionTable);
for (DescriptionGraph descriptionGraph : m_tableau.m_permanentDLOntology.getAllDescriptionGraphs()) {
int arityInteger=descriptionGraph.getNumberOfVertices()+1;
if (!m_extensionTablesByArity.containsKey(arityInteger))
m_extensionTablesByArity.put(arityInteger,new ExtensionTableWithFullIndex(m_tableau,descriptionGraph.getNumberOfVertices()+1,!m_tableau.isDeterministic()));
}
m_allExtensionTablesArray=new ExtensionTable[m_extensionTablesByArity.size()];
m_extensionTablesByArity.values(m_allExtensionTablesArray);
m_binaryAuxiliaryTupleContains=new Object[2];
m_binaryAuxiliaryTupleAdd=new Object[2];
m_ternaryAuxiliaryTupleContains=new Object[3];
m_ternaryAuxiliaryTupleAdd=new Object[3];
m_fouraryAuxiliaryTupleContains=new Object[4];
m_fouraryAuxiliaryTupleAdd=new Object[4];
}
/**
* Clear.
*/
public void clear() {
for (int index=m_allExtensionTablesArray.length-1;index>=0;--index)
m_allExtensionTablesArray[index].clear();
m_clashDependencySet=null;
m_binaryAuxiliaryTupleContains[0]=null;
m_binaryAuxiliaryTupleContains[1]=null;
m_binaryAuxiliaryTupleAdd[0]=null;
m_binaryAuxiliaryTupleAdd[1]=null;
m_ternaryAuxiliaryTupleContains[0]=null;
m_ternaryAuxiliaryTupleContains[1]=null;
m_ternaryAuxiliaryTupleContains[2]=null;
m_ternaryAuxiliaryTupleAdd[0]=null;
m_ternaryAuxiliaryTupleAdd[1]=null;
m_ternaryAuxiliaryTupleAdd[2]=null;
m_fouraryAuxiliaryTupleContains[0]=null;
m_fouraryAuxiliaryTupleContains[1]=null;
m_fouraryAuxiliaryTupleContains[2]=null;
m_fouraryAuxiliaryTupleContains[3]=null;
m_fouraryAuxiliaryTupleAdd[0]=null;
m_fouraryAuxiliaryTupleAdd[1]=null;
m_fouraryAuxiliaryTupleAdd[2]=null;
m_fouraryAuxiliaryTupleAdd[3]=null;
}
/**
* Branching point pushed.
*/
public void branchingPointPushed() {
for (int index=m_allExtensionTablesArray.length-1;index>=0;--index)
m_allExtensionTablesArray[index].branchingPointPushed();
}
/**
* Backtrack.
*/
public void backtrack() {
for (int index=m_allExtensionTablesArray.length-1;index>=0;--index)
m_allExtensionTablesArray[index].backtrack();
}
/**
* @return binary extension table
*/
public ExtensionTable getBinaryExtensionTable() {
return m_binaryExtensionTable;
}
/**
* @return ternary extension table
*/
public ExtensionTable getTernaryExtensionTable() {
return m_ternaryExtensionTable;
}
/**
* @param arity arity
* @return extension table
*/
public ExtensionTable getExtensionTable(int arity) {
switch (arity) {
case 2:
return m_binaryExtensionTable;
case 3:
return m_ternaryExtensionTable;
default:
return m_extensionTablesByArity.get(arity);
}
}
/**
* @return extension tables
*/
public Collection getExtensionTables() {
return m_extensionTablesByArity.valueCollection();
}
/**
* @return true if changes are created
*/
public boolean propagateDeltaNew() {
boolean hasChange=false;
for (int index=0;index