org.semanticweb.owlapi.util.OWLOntologyMerger Maven / Gradle / Ivy

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/*
 * This file is part of the OWL API.
 *
 * The contents of this file are subject to the LGPL License, Version 3.0.
 *
 * Copyright (C) 2011, The University of Manchester
 *
 * This program is free software: you can redistribute it and/or modify
 * it under the terms of the GNU General Public License as published by
 * the Free Software Foundation, either version 3 of the License, or
 * (at your option) any later version.
 *
 * This program is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 * GNU General Public License for more details.
 *
 * You should have received a copy of the GNU General Public License
 * along with this program.  If not, see http://www.gnu.org/licenses/.
 *
 *
 * Alternatively, the contents of this file may be used under the terms of the Apache License, Version 2.0
 * in which case, the provisions of the Apache License Version 2.0 are applicable instead of those above.
 *
 * Copyright 2011, University of Manchester
 *
 * Licensed under the Apache License, Version 2.0 (the "License");
 * you may not use this file except in compliance with the License.
 * You may obtain a copy of the License at
 *
 * http://www.apache.org/licenses/LICENSE-2.0
 *
 * Unless required by applicable law or agreed to in writing, software
 * distributed under the License is distributed on an "AS IS" BASIS,
 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 * See the License for the specific language governing permissions and
 * limitations under the License.
 */
package org.semanticweb.owlapi.util;

import java.util.ArrayList;
import java.util.List;
import java.util.Set;

import org.semanticweb.owlapi.model.AddAxiom;
import org.semanticweb.owlapi.model.IRI;
import org.semanticweb.owlapi.model.OWLAxiom;
import org.semanticweb.owlapi.model.OWLOntology;
import org.semanticweb.owlapi.model.OWLOntologyChange;
import org.semanticweb.owlapi.model.OWLOntologyCreationException;
import org.semanticweb.owlapi.model.OWLOntologyManager;
import org.semanticweb.owlapi.model.OWLOntologySetProvider;

/**
 * A very very simple merger, which just creates an ontology which contains the
 * union of axioms from a set of ontologies.
 * 
 * @author Matthew Horridge, The University Of Manchester, Bio-Health
 *         Informatics Group, Date: 29-Apr-2007
 */
public class OWLOntologyMerger implements OWLAxiomFilter {

    private final OWLOntologySetProvider setProvider;
    private final OWLAxiomFilter axiomFilter;
    private final boolean mergeOnlyLogicalAxioms;

    /**
     * @param setProvider
     *        the ontology provider
     */
    public OWLOntologyMerger(OWLOntologySetProvider setProvider) {
        this.setProvider = setProvider;
        axiomFilter = this;
        mergeOnlyLogicalAxioms = false;
    }

    /**
     * @param setProvider
     *        the ontology provider
     * @param mergeOnlyLogicalAxioms
     *        true if only logical axioms should be included
     */
    public OWLOntologyMerger(OWLOntologySetProvider setProvider,
            boolean mergeOnlyLogicalAxioms) {
        this.setProvider = setProvider;
        this.mergeOnlyLogicalAxioms = mergeOnlyLogicalAxioms;
        axiomFilter = this;
    }

    /**
     * @param setProvider
     *        the ontology provider
     * @param axiomFilter
     *        the filter to use
     */
    public OWLOntologyMerger(OWLOntologySetProvider setProvider,
            OWLAxiomFilter axiomFilter) {
        this.setProvider = setProvider;
        this.axiomFilter = axiomFilter;
        mergeOnlyLogicalAxioms = false;
    }

    /**
     * @param ontologyManager
     *        the manager containing the ontologies
     * @param ontologyIRI
     *        the new ontology IRI
     * @return the new ontology
     * @throws OWLOntologyCreationException
     *         if any creation exception arises
     */
    public OWLOntology createMergedOntology(OWLOntologyManager ontologyManager,
            IRI ontologyIRI) throws OWLOntologyCreationException {
        OWLOntology ontology;
        if (ontologyIRI != null) {
            ontology = ontologyManager.createOntology(ontologyIRI);
        } else {
            ontology = ontologyManager.createOntology();
        }
        List changes = new ArrayList();
        for (OWLOntology ont : setProvider.getOntologies()) {
            for (OWLAxiom ax : getAxioms(ont)) {
                if (axiomFilter.passes(ax)) {
                    changes.add(new AddAxiom(ontology, ax));
                }
            }
        }
        ontologyManager.applyChanges(changes);
        return ontology;
    }

    private Set getAxioms(OWLOntology ont) {
        if (mergeOnlyLogicalAxioms) {
            return ont.getLogicalAxioms();
        } else {
            return ont.getAxioms();
        }
    }

    @Override
    public boolean passes(OWLAxiom axiom) {
        return true;
    }
}