org.semanticweb.owlapi.debugging.AbstractOWLDebugger Maven / Gradle / Ivy
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/* This file is part of the OWL API.
* The contents of this file are subject to the LGPL License, Version 3.0.
* Copyright 2014, The University of Manchester
*
* This program is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
* This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.
* You should have received a copy of the GNU General Public License along with this program. If not, see http://www.gnu.org/licenses/.
*
* Alternatively, the contents of this file may be used under the terms of the Apache License, Version 2.0 in which case, the provisions of the Apache License Version 2.0 are applicable instead of those above.
* Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at
* http://www.apache.org/licenses/LICENSE-2.0
* Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. */
package org.semanticweb.owlapi.debugging;
import static org.semanticweb.owlapi.util.OWLAPIPreconditions.checkNotNull;
import java.util.Collections;
import java.util.HashSet;
import java.util.Set;
import org.semanticweb.owlapi.model.AddAxiom;
import org.semanticweb.owlapi.model.IRI;
import org.semanticweb.owlapi.model.OWLAxiom;
import org.semanticweb.owlapi.model.OWLClassExpression;
import org.semanticweb.owlapi.model.OWLDataFactory;
import org.semanticweb.owlapi.model.OWLException;
import org.semanticweb.owlapi.model.OWLOntology;
import org.semanticweb.owlapi.model.OWLOntologyCreationException;
import org.semanticweb.owlapi.model.OWLOntologyManager;
import org.semanticweb.owlapi.model.OWLRuntimeException;
import org.semanticweb.owlapi.model.RemoveAxiom;
/**
* An abstract debugger which provides common infrastructure for finding
* multiple justification. This functionality relies on a concrete
* implementation of a debugger that can compute a minimal set of axioms that
* cause the unsatisfiability.
*
* @author Matthew Horridge, The University Of Manchester, Bio-Health Informatics Group
* @since 2.0.0
*/
public abstract class AbstractOWLDebugger implements OWLDebugger {
protected final OWLOntologyManager man;
protected final OWLDataFactory df;
private OWLOntology ontology;
/**
* Instantiates a new abstract owl debugger.
*
* @param owlOntologyManager the owl ontology manager
* @param ontology the ontology
*/
protected AbstractOWLDebugger(OWLOntologyManager owlOntologyManager, OWLOntology ontology) {
man = checkNotNull(owlOntologyManager, "owlOntologyManager cannot be null");
this.ontology = checkNotNull(ontology, "ontology cannot be null");
df = man.getOWLDataFactory();
mergeImportsClosure();
}
private void mergeImportsClosure() {
OWLOntology o = ontology;
try {
ontology = man
.createOntology(IRI.getNextDocumentIRI("http://debugger.semanticweb.org/ontolog"),
o.importsClosure(), true);
} catch (OWLOntologyCreationException e) {
throw new OWLRuntimeException(e);
}
}
/**
* Gets the current class.
*
* @return the current class
* @throws OWLException the OWL exception
*/
protected abstract OWLClassExpression getCurrentClass() throws OWLException;
@Override
public OWLOntology getOWLOntology() {
return ontology;
}
@Override
public Set> getAllSOSForInconsistentClass(OWLClassExpression cls)
throws OWLException {
Set firstMups = getSOSForInconsistentClass(cls);
if (firstMups.isEmpty()) {
return Collections.emptySet();
}
Set> allMups = new HashSet<>();
allMups.add(firstMups);
Set> satPaths = new HashSet<>();
Set currentPathContents = new HashSet<>();
constructHittingSetTree(firstMups, allMups, satPaths, currentPathContents);
return allMups;
}
// Hitting Set Stuff
/**
* This is a recursive method that builds a hitting set tree to obtain all
* justifications for an unsatisfiable class.
*
* @param mups The current justification for the current class. This corresponds to a node in
* the hitting set tree.
* @param allMups All of the MUPS that have been found - this set gets populated over the course
* of the tree building process. Initially this should just contain the first justification
* @param satPaths Paths that have been completed.
* @param currentPathContents The contents of the current path. Initially this should be an
* empty set.
* @throws OWLException if there is any problem
*/
public void constructHittingSetTree(Set mups, Set> allMups,
Set> satPaths,
Set currentPathContents) throws OWLException {
// We go through the current mups, axiom by axiom, and extend the tree
// with edges for each axiom
for (OWLAxiom axiom : mups) {
// Remove the current axiom from the ontology
man.applyChange(new RemoveAxiom(ontology, axiom));
currentPathContents.add(axiom);
boolean earlyTermination = false;
// Early path termination. If our path contents are the superset of
// the contents of a path then we can terminate here.
for (Set satPath : satPaths) {
if (satPath.containsAll(currentPathContents)) {
earlyTermination = true;
break;
}
}
handleLateTermination(allMups, satPaths, currentPathContents, earlyTermination);
// Back track - go one level up the tree and run for the next axiom
currentPathContents.remove(axiom);
// Done with the axiom that was removed. Add it back in
man.applyChange(new AddAxiom(ontology, axiom));
}
}
protected void handleLateTermination(Set> allMups, Set> satPaths,
Set currentPathContents, boolean earlyTermination) throws OWLException {
if (!earlyTermination) {
// Generate a new node - i.e. a new justification set
Set newMUPS = getSOSForInconsistentClass(getCurrentClass());
if (!newMUPS.isEmpty()) {
// We have a new justification set, and a new node
if (!allMups.contains(newMUPS)) {
// Entirely new justification set
allMups.add(newMUPS);
constructHittingSetTree(newMUPS, allMups, satPaths, currentPathContents);
}
} else {
// End of current path - add it to the list of paths
satPaths.add(new HashSet<>(currentPathContents));
}
}
}
}