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The Waikato Environment for Knowledge Analysis (WEKA), a machine learning workbench. This version represents the developer version, the "bleeding edge" of development, you could say. New functionality gets added to this version.
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/*
 *   This program is free software: you can redistribute it and/or modify
 *   it under the terms of the GNU General Public License as published by
 *   the Free Software Foundation, either version 3 of the License, or
 *   (at your option) any later version.
 *
 *   This program is distributed in the hope that it will be useful,
 *   but WITHOUT ANY WARRANTY; without even the implied warranty of
 *   MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 *   GNU General Public License for more details.
 *
 *   You should have received a copy of the GNU General Public License
 *   along with this program.  If not, see .
 */

/*
 * RelationalLocator.java
 * Copyright (C) 2006-2012 University of Waikato, Hamilton, New Zealand
 */

package weka.core;

/**
 * This class locates and records the indices of relational attributes,
 * 
 * @author fracpete (fracpete at waikato dot ac dot nz)
 * @version $Revision: 10370 $
 * @see Attribute#RELATIONAL
 */
public class RelationalLocator extends AttributeLocator {

  /** for serialization */

  private static final long serialVersionUID = 4646872277151854732L;

  /**
   * Initializes the RelationalLocator with the given data.
   * 
   * @param data the data to work on
   */
  public RelationalLocator(Instances data) {
    super(data, Attribute.RELATIONAL);
  }

  /**
   * Initializes the RelationalLocator with the given data. Checks only the
   * given range.
   * 
   * @param data the data to work on
   * @param fromIndex the first index to inspect (including)
   * @param toIndex the last index to check (including)
   */
  public RelationalLocator(Instances data, int fromIndex, int toIndex) {
    super(data, Attribute.RELATIONAL, fromIndex, toIndex);
  }

  /**
   * Initializes the RelationalLocator with the given data. Checks only the
   * specified attribute indices.
   * 
   * @param data the data to work on
   * @param indices the attribute indices to check
   */
  public RelationalLocator(Instances data, int[] indices) {
    super(data, Attribute.RELATIONAL, indices);
  }

  /**
   * Copies relational values contained in the instance copied to a new dataset.
   * The Instance must already be assigned to a dataset. This dataset and the
   * destination dataset must have the same structure.
   * 
   * @param inst the Instance containing the relational values to copy.
   * @param destDataset the destination set of Instances
   * @param strAtts an AttributeLocator containing the indices of any relational
   *          attributes in the dataset.
   */
  public static void copyRelationalValues(Instance inst, Instances destDataset,
    AttributeLocator strAtts) {

    if (inst.dataset() == null) {
      throw new IllegalArgumentException("Instance has no dataset assigned!!");
    } else if (inst.dataset().numAttributes() != destDataset.numAttributes()) {
      throw new IllegalArgumentException(
        "Src and Dest differ in # of attributes: "
          + inst.dataset().numAttributes() + " != "
          + destDataset.numAttributes());
    }
    copyRelationalValues(inst, true, inst.dataset(), strAtts, destDataset,
      strAtts);
  }

  /**
   * Takes relational values referenced by an Instance and copies them from a
   * source dataset to a destination dataset. The instance references are
   * updated to be valid for the destination dataset. The instance may have the
   * structure (i.e. number and attribute position) of either dataset (this
   * affects where references are obtained from). Only works if the number of
   * relational attributes is the same in both indices (implicitly these
   * relational attributes should be semantically same but just with shifted
   * positions).
   * 
   * @param instance the instance containing references to relations in the
   *          source dataset that will have references updated to be valid for
   *          the destination dataset.
   * @param instSrcCompat true if the instance structure is the same as the
   *          source, or false if it is the same as the destination (i.e. which
   *          of the relational attribute indices contains the correct locations
   *          for this instance).
   * @param srcDataset the dataset for which the current instance relationvalue
   *          references are valid (after any position mapping if needed)
   * @param srcLoc an AttributeLocator containing the indices of relational
   *          attributes in the source datset.
   * @param destDataset the dataset for which the current instance relation
   *          references need to be inserted (after any position mapping if
   *          needed)
   * @param destLoc an AttributeLocator containing the indices of relational
   *          attributes in the destination datset.
   */
  public static void copyRelationalValues(Instance instance,
    boolean instSrcCompat, Instances srcDataset, AttributeLocator srcLoc,
    Instances destDataset, AttributeLocator destLoc) {
    if (srcDataset == destDataset) {
      return;
    }

    if (srcLoc.getAttributeIndices().length != destLoc.getAttributeIndices().length) {
      throw new IllegalArgumentException(
        "Src and Dest relational indices differ in length: "
          + srcLoc.getAttributeIndices().length + " != "
          + destLoc.getAttributeIndices().length);
    }

    if (srcLoc.getLocatorIndices().length != destLoc.getLocatorIndices().length) {
      throw new IllegalArgumentException(
        "Src and Dest locator indices differ in length: "
          + srcLoc.getLocatorIndices().length + " != "
          + destLoc.getLocatorIndices().length);
    }

    for (int i = 0; i < srcLoc.getAttributeIndices().length; i++) {
      int instIndex = instSrcCompat ? srcLoc.getActualIndex(srcLoc
        .getAttributeIndices()[i]) : destLoc.getActualIndex(destLoc
        .getAttributeIndices()[i]);
      Attribute src = srcDataset.attribute(srcLoc.getActualIndex(srcLoc
        .getAttributeIndices()[i]));
      Attribute dest = destDataset.attribute(destLoc.getActualIndex(destLoc
        .getAttributeIndices()[i]));
      if (!instance.isMissing(instIndex)) {
        int valIndex = dest.addRelation(src.relation((int) instance
          .value(instIndex)));
        instance.setValue(instIndex, valIndex);
      }
    }

    // recurse if necessary
    int[] srcIndices = srcLoc.getLocatorIndices();
    int[] destIndices = destLoc.getLocatorIndices();
    for (int i = 0; i < srcIndices.length; i++) {
      int index = instSrcCompat ? srcLoc.getActualIndex(srcIndices[i])
        : destLoc.getActualIndex(destIndices[i]);
      if (instance.isMissing(index)) {
        continue;
      }
      Instances rel = instSrcCompat ? instance.relationalValue(index)
        : instance.relationalValue(index);
      AttributeLocator srcRelAttsNew = srcLoc.getLocator(srcIndices[i]);
      Instances srcDatasetNew = srcRelAttsNew.getData();
      AttributeLocator destRelAttsNew = destLoc.getLocator(destIndices[i]);
      Instances destDatasetNew = destRelAttsNew.getData();
      for (int n = 0; n < rel.numInstances(); n++) {
        copyRelationalValues(rel.instance(n), instSrcCompat, srcDatasetNew,
          srcRelAttsNew, destDatasetNew, destRelAttsNew);
      }
    }
  }

  /**
   * Returns the revision string.
   * 
   * @return the revision
   */
  @Override
  public String getRevision() {
    return RevisionUtils.extract("$Revision: 10370 $");
  }
}