Many resources are needed to download a project. Please understand that we have to compensate our server costs. Thank you in advance. Project price only 1 $
You can buy this project and download/modify it how often you want.
/*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation, either version 3 of the License, or
* (at your option) any later version.
*
* This program is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with this program. If not, see .
*/
/*
* C45Split.java
* Copyright (C) 1999-2012 University of Waikato, Hamilton, New Zealand
*
*/
package weka.classifiers.trees.j48;
import java.util.Enumeration;
import weka.core.Instance;
import weka.core.Instances;
import weka.core.RevisionUtils;
import weka.core.Utils;
/**
* Class implementing a C4.5-type split on an attribute.
*
* @author Eibe Frank ([email protected])
* @version $Revision: 14911 $
*/
public class C45Split extends ClassifierSplitModel {
/** for serialization */
private static final long serialVersionUID = 3064079330067903161L;
/** Desired number of branches. */
protected int m_complexityIndex;
/** Attribute to split on. */
protected final int m_attIndex;
/** Minimum number of objects in a split. */
protected final int m_minNoObj;
/** Use MDL correction? */
protected final boolean m_useMDLcorrection;
/** Value of split point. */
protected double m_splitPoint;
/** InfoGain of split. */
protected double m_infoGain;
/** GainRatio of split. */
protected double m_gainRatio;
/** The sum of the weights of the instances. */
protected final double m_sumOfWeights;
/** Number of split points. */
protected int m_index;
/** Static reference to splitting criterion. */
protected static InfoGainSplitCrit infoGainCrit = new InfoGainSplitCrit();
/** Static reference to splitting criterion. */
protected static GainRatioSplitCrit gainRatioCrit = new GainRatioSplitCrit();
/**
* Initializes the split model.
*/
public C45Split(int attIndex, int minNoObj, double sumOfWeights,
boolean useMDLcorrection) {
// Get index of attribute to split on.
m_attIndex = attIndex;
// Set minimum number of objects.
m_minNoObj = minNoObj;
// Set the sum of the weights
m_sumOfWeights = sumOfWeights;
// Whether to use the MDL correction for numeric attributes
m_useMDLcorrection = useMDLcorrection;
}
/**
* Creates a C4.5-type split on the given data. Assumes that none of the class
* values is missing.
*
* @exception Exception if something goes wrong
*/
@Override
public void buildClassifier(Instances trainInstances) throws Exception {
// Initialize the remaining instance variables.
m_numSubsets = 0;
m_splitPoint = Double.MAX_VALUE;
m_infoGain = 0;
m_gainRatio = 0;
// Different treatment for enumerated and numeric
// attributes.
if (trainInstances.attribute(m_attIndex).isNominal()) {
m_complexityIndex = trainInstances.attribute(m_attIndex).numValues();
m_index = m_complexityIndex;
handleEnumeratedAttribute(trainInstances);
} else {
m_complexityIndex = 2;
m_index = 0;
trainInstances.sort(trainInstances.attribute(m_attIndex));
handleNumericAttribute(trainInstances);
}
}
/**
* Returns index of attribute for which split was generated.
*/
public final int attIndex() {
return m_attIndex;
}
/**
* Returns the split point (numeric attribute only).
*
* @return the split point used for a test on a numeric attribute
*/
public double splitPoint() {
return m_splitPoint;
}
/**
* Gets class probability for instance.
*
* @exception Exception if something goes wrong
*/
@Override
public final double classProb(int classIndex, Instance instance, int theSubset)
throws Exception {
if (theSubset <= -1) {
double[] weights = weights(instance);
if (weights == null) {
return m_distribution.prob(classIndex);
} else {
double prob = 0;
for (int i = 0; i < weights.length; i++) {
prob += weights[i] * m_distribution.prob(classIndex, i);
}
return prob;
}
} else {
if (Utils.gr(m_distribution.perBag(theSubset), 0)) {
return m_distribution.prob(classIndex, theSubset);
} else {
return m_distribution.prob(classIndex);
}
}
}
/**
* Returns coding cost for split (used in rule learner).
*/
@Override
public final double codingCost() {
return Utils.log2(m_index);
}
/**
* Returns (C4.5-type) gain ratio for the generated split.
*/
public final double gainRatio() {
return m_gainRatio;
}
/**
* Creates split on enumerated attribute.
*
* @exception Exception if something goes wrong
*/
private void handleEnumeratedAttribute(Instances trainInstances)
throws Exception {
Instance instance;
m_distribution = new Distribution(m_complexityIndex,
trainInstances.numClasses());
// Only Instances with known values are relevant.
Enumeration enu = trainInstances.enumerateInstances();
while (enu.hasMoreElements()) {
instance = enu.nextElement();
if (!instance.isMissing(m_attIndex)) {
m_distribution.add((int) instance.value(m_attIndex), instance);
}
}
// Check if minimum number of Instances in at least two
// subsets.
if (m_distribution.check(m_minNoObj)) {
m_numSubsets = m_complexityIndex;
m_infoGain = infoGainCrit.splitCritValue(m_distribution, m_sumOfWeights);
m_gainRatio = gainRatioCrit.splitCritValue(m_distribution,
m_sumOfWeights, m_infoGain);
}
}
/**
* Creates split on numeric attribute.
*
* @exception Exception if something goes wrong
*/
private void handleNumericAttribute(Instances trainInstances)
throws Exception {
int firstMiss;
int next = 1;
int last = 0;
int splitIndex = -1;
double currentInfoGain;
double defaultEnt;
double minSplit;
Instance instance;
int i;
// Current attribute is a numeric attribute.
m_distribution = new Distribution(2, trainInstances.numClasses());
// Only Instances with known values are relevant.
Enumeration enu = trainInstances.enumerateInstances();
i = 0;
while (enu.hasMoreElements()) {
instance = enu.nextElement();
if (instance.isMissing(m_attIndex)) {
break;
}
m_distribution.add(1, instance);
i++;
}
firstMiss = i;
// Compute minimum number of Instances required in each
// subset.
minSplit = 0.1 * (m_distribution.total()) / (trainInstances.numClasses());
if (Utils.smOrEq(minSplit, m_minNoObj)) {
minSplit = m_minNoObj;
} else if (Utils.gr(minSplit, 25)) {
minSplit = 25;
}
// Enough Instances with known values?
if (Utils.sm(firstMiss, 2 * minSplit)) {
return;
}
// Compute values of criteria for all possible split
// indices.
defaultEnt = infoGainCrit.oldEnt(m_distribution);
while (next < firstMiss) {
if (trainInstances.instance(next - 1).value(m_attIndex) + 1e-5 < trainInstances
.instance(next).value(m_attIndex)) {
// Move class values for all Instances up to next
// possible split point.
m_distribution.shiftRange(1, 0, trainInstances, last, next);
// Check if enough Instances in each subset and compute
// values for criteria.
if (Utils.grOrEq(m_distribution.perBag(0), minSplit)
&& Utils.grOrEq(m_distribution.perBag(1), minSplit)) {
currentInfoGain = infoGainCrit.splitCritValue(m_distribution,
m_sumOfWeights, defaultEnt);
if (Utils.gr(currentInfoGain, m_infoGain)) {
m_infoGain = currentInfoGain;
splitIndex = next - 1;
}
m_index++;
}
last = next;
}
next++;
}
// Was there any useful split?
if (m_index == 0) {
return;
}
// Compute modified information gain for best split.
if (m_useMDLcorrection) {
m_infoGain = m_infoGain - (Utils.log2(m_index) / m_sumOfWeights);
}
if (Utils.smOrEq(m_infoGain, 0)) {
return;
}
// Set instance variables' values to values for
// best split.
m_numSubsets = 2;
m_splitPoint = (trainInstances.instance(splitIndex + 1).value(m_attIndex) + trainInstances
.instance(splitIndex).value(m_attIndex)) / 2;
// In case we have a numerical precision problem we need to choose the
// smaller value
if (m_splitPoint == trainInstances.instance(splitIndex + 1).value(
m_attIndex)) {
m_splitPoint = trainInstances.instance(splitIndex).value(m_attIndex);
}
// Restore distributioN for best split.
m_distribution = new Distribution(2, trainInstances.numClasses());
m_distribution.addRange(0, trainInstances, 0, splitIndex + 1);
m_distribution.addRange(1, trainInstances, splitIndex + 1, firstMiss);
// Compute modified gain ratio for best split.
m_gainRatio = gainRatioCrit.splitCritValue(m_distribution, m_sumOfWeights,
m_infoGain);
}
/**
* Returns (C4.5-type) information gain for the generated split.
*/
public final double infoGain() {
return m_infoGain;
}
/**
* Prints left side of condition..
*
* @param data training set.
*/
@Override
public final String leftSide(Instances data) {
return data.attribute(m_attIndex).name();
}
/**
* Prints the condition satisfied by instances in a subset.
*
* @param index of subset
* @param data training set.
*/
@Override
public final String rightSide(int index, Instances data) {
StringBuffer text;
text = new StringBuffer();
if (data.attribute(m_attIndex).isNominal()) {
text.append(" = " + data.attribute(m_attIndex).value(index));
} else if (index == 0) {
text.append(" <= " + Utils.doubleToString(m_splitPoint, 6));
} else {
text.append(" > " + Utils.doubleToString(m_splitPoint, 6));
}
return text.toString();
}
/**
* Returns a string containing java source code equivalent to the test made at
* this node. The instance being tested is called "i".
*
* @param index index of the nominal value tested
* @param data the data containing instance structure info
* @return a value of type 'String'
*/
@Override
public final String sourceExpression(int index, Instances data) {
StringBuffer expr = null;
if (index < 0) {
return "i[" + m_attIndex + "] == null";
}
if (data.attribute(m_attIndex).isNominal()) {
expr = new StringBuffer("i[");
expr.append(m_attIndex).append("]");
expr.append(".equals(\"").append(data.attribute(m_attIndex).value(index))
.append("\")");
} else {
expr = new StringBuffer("((Double) i[");
expr.append(m_attIndex).append("])");
if (index == 0) {
expr.append(".doubleValue() <= ").append(m_splitPoint);
} else {
expr.append(".doubleValue() > ").append(m_splitPoint);
}
}
return expr.toString();
}
/**
* Sets split point to greatest value in given data smaller or equal to old
* split point. (C4.5 does this for some strange reason).
*/
public final void setSplitPoint(Instances allInstances) {
double newSplitPoint = -Double.MAX_VALUE;
if ((allInstances.attribute(m_attIndex).isNumeric()) && (m_numSubsets > 1)) {
for (int i = 0; i < allInstances.numInstances(); i++) {
Instance instance = allInstances.instance(i);
double tempValue = instance.value(m_attIndex);
if (!Utils.isMissingValue(tempValue)) {
if ((tempValue > newSplitPoint) && (tempValue <= m_splitPoint)) {
newSplitPoint = tempValue;
}
}
}
m_splitPoint = newSplitPoint;
}
}
/**
* Returns the minsAndMaxs of the index.th subset.
*/
public final double[][] minsAndMaxs(Instances data, double[][] minsAndMaxs,
int index) {
double[][] newMinsAndMaxs = new double[data.numAttributes()][2];
for (int i = 0; i < data.numAttributes(); i++) {
newMinsAndMaxs[i][0] = minsAndMaxs[i][0];
newMinsAndMaxs[i][1] = minsAndMaxs[i][1];
if (i == m_attIndex) {
if (data.attribute(m_attIndex).isNominal()) {
newMinsAndMaxs[m_attIndex][1] = 1;
} else {
newMinsAndMaxs[m_attIndex][1 - index] = m_splitPoint;
}
}
}
return newMinsAndMaxs;
}
/**
* Sets distribution associated with model.
*/
@Override
public void resetDistribution(Instances data) throws Exception {
Instances insts = new Instances(data, data.numInstances());
for (int i = 0; i < data.numInstances(); i++) {
if (whichSubset(data.instance(i)) > -1) {
insts.add(data.instance(i));
}
}
Distribution newD = new Distribution(insts, this);
newD.addInstWithUnknown(data, m_attIndex);
m_distribution = newD;
}
/**
* Returns weights if instance is assigned to more than one subset. Returns
* null if instance is only assigned to one subset.
*/
@Override
public final double[] weights(Instance instance) {
double[] weights;
int i;
if (instance.isMissing(m_attIndex)) {
weights = new double[m_numSubsets];
for (i = 0; i < m_numSubsets; i++) {
weights[i] = m_distribution.perBag(i) / m_distribution.total();
}
return weights;
} else {
return null;
}
}
/**
* Returns index of subset instance is assigned to. Returns -1 if instance is
* assigned to more than one subset.
*
* @exception Exception if something goes wrong
*/
@Override
public final int whichSubset(Instance instance) throws Exception {
if (instance.isMissing(m_attIndex)) {
return -1;
} else {
if (instance.attribute(m_attIndex).isNominal()) {
return (int) instance.value(m_attIndex);
} else if (instance.value(m_attIndex) <= m_splitPoint) {
return 0;
} else {
return 1;
}
}
}
/**
* Returns the revision string.
*
* @return the revision
*/
@Override
public String getRevision() {
return RevisionUtils.extract("$Revision: 14911 $");
}
}
