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The Waikato Environment for Knowledge Analysis (WEKA), a machine
learning workbench. This version represents the developer version, the
"bleeding edge" of development, you could say. New functionality gets added
to this version.
/*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation, either version 3 of the License, or
* (at your option) any later version.
*
* This program is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with this program. If not, see .
*/
/*
* ClustererPerformanceEvaluator.java
* Copyright (C) 2004-2012 University of Waikato, Hamilton, New Zealand
*
*/
package weka.gui.beans;
import java.io.Serializable;
import java.util.Enumeration;
import java.util.Vector;
import weka.clusterers.ClusterEvaluation;
import weka.clusterers.Clusterer;
/**
* A bean that evaluates the performance of batch trained clusterers
*
* @author Stefan Mutter
* @version $Revision: 10220 $
*/
public class ClustererPerformanceEvaluator extends AbstractEvaluator implements
BatchClustererListener, Serializable, UserRequestAcceptor, EventConstraints {
/** for serialization */
private static final long serialVersionUID = 8041163601333978584L;
/**
* Evaluation object used for evaluating a clusterer
*/
private transient ClusterEvaluation m_eval;
/**
* Holds the clusterer to be evaluated
*/
private transient Clusterer m_clusterer;
private transient Thread m_evaluateThread = null;
private final Vector m_textListeners = new Vector();
public ClustererPerformanceEvaluator() {
m_visual.loadIcons(BeanVisual.ICON_PATH
+ "ClustererPerformanceEvaluator.gif", BeanVisual.ICON_PATH
+ "ClustererPerformanceEvaluator_animated.gif");
m_visual.setText("ClustererPerformanceEvaluator");
}
/**
* Set a custom (descriptive) name for this bean
*
* @param name the name to use
*/
@Override
public void setCustomName(String name) {
m_visual.setText(name);
}
/**
* Get the custom (descriptive) name for this bean (if one has been set)
*
* @return the custom name (or the default name)
*/
@Override
public String getCustomName() {
return m_visual.getText();
}
/**
* Global info for this bean
*
* @return a String
value
*/
public String globalInfo() {
return "Evaluate the performance of batch trained clusterers.";
}
/**
* Accept a clusterer to be evaluated
*
* @param ce a BatchClustererEvent
value
*/
@Override
public void acceptClusterer(final BatchClustererEvent ce) {
if (ce.getTestSet().isStructureOnly()) {
return; // cant evaluate empty instances
}
try {
if (m_evaluateThread == null) {
m_evaluateThread = new Thread() {
@Override
@SuppressWarnings("deprecation")
public void run() {
boolean numericClass = false;
// final String oldText = m_visual.getText();
try {
if (ce.getSetNumber() == 1 /*
* || ce.getClusterer() != m_clusterer
*/) {
m_eval = new ClusterEvaluation();
m_clusterer = ce.getClusterer();
m_eval.setClusterer(m_clusterer);
}
if (ce.getSetNumber() <= ce.getMaxSetNumber()) {
// m_visual.setText("Evaluating ("+ce.getSetNumber()+")...");
if (m_logger != null) {
m_logger.statusMessage(statusMessagePrefix() + "Evaluating ("
+ ce.getSetNumber() + ")...");
}
m_visual.setAnimated();
if (ce.getTestSet().getDataSet().classIndex() != -1
&& ce.getTestSet().getDataSet().classAttribute().isNumeric()) {
numericClass = true;
ce.getTestSet().getDataSet().setClassIndex(-1);
}
m_eval.evaluateClusterer(ce.getTestSet().getDataSet());
}
if (ce.getSetNumber() == ce.getMaxSetNumber()) {
String textTitle = m_clusterer.getClass().getName();
textTitle = textTitle.substring(textTitle.lastIndexOf('.') + 1,
textTitle.length());
String test;
if (ce.getTestOrTrain() == 0) {
test = "test";
} else {
test = "training";
}
String resultT = "=== Evaluation result for " + test
+ " instances ===\n\n" + "Scheme: " + textTitle + "\n"
+ "Relation: " + ce.getTestSet().getDataSet().relationName()
+ "\n\n" + m_eval.clusterResultsToString();
if (numericClass) {
resultT = resultT
+ "\n\nNo class based evaluation possible. Class attribute has to be nominal.";
}
TextEvent te = new TextEvent(
ClustererPerformanceEvaluator.this, resultT, textTitle);
notifyTextListeners(te);
if (m_logger != null) {
m_logger.statusMessage(statusMessagePrefix() + "Finished.");
}
}
} catch (Exception ex) {
// stop all processing
ClustererPerformanceEvaluator.this.stop();
if (m_logger != null) {
m_logger.statusMessage(statusMessagePrefix()
+ "ERROR (see log for details");
m_logger.logMessage("[ClustererPerformanceEvaluator] "
+ statusMessagePrefix()
+ " problem while evaluating clusterer. " + ex.getMessage());
}
ex.printStackTrace();
} finally {
// m_visual.setText(oldText);
m_visual.setStatic();
m_evaluateThread = null;
if (isInterrupted()) {
if (m_logger != null) {
m_logger.logMessage("[" + getCustomName()
+ "] Evaluation interrupted!");
m_logger.statusMessage(statusMessagePrefix() + "INTERRUPTED");
}
}
block(false);
}
}
};
m_evaluateThread.setPriority(Thread.MIN_PRIORITY);
m_evaluateThread.start();
// make sure the thread is still running before we block
// if (m_evaluateThread.isAlive()) {
block(true);
// }
m_evaluateThread = null;
}
} catch (Exception ex) {
ex.printStackTrace();
}
}
/**
* Returns true if. at this time, the bean is busy with some (i.e. perhaps a
* worker thread is performing some calculation).
*
* @return true if the bean is busy.
*/
@Override
public boolean isBusy() {
return (m_evaluateThread != null);
}
/**
* Try and stop any action
*/
@Override
@SuppressWarnings("deprecation")
public void stop() {
// tell the listenee (upstream bean) to stop
if (m_listenee instanceof BeanCommon) {
// System.err.println("Listener is BeanCommon");
((BeanCommon) m_listenee).stop();
}
// stop the evaluate thread
if (m_evaluateThread != null) {
m_evaluateThread.interrupt();
m_evaluateThread.stop();
m_evaluateThread = null;
m_visual.setStatic();
}
}
/**
* Function used to stop code that calls acceptClusterer. This is needed as
* clusterer evaluation is performed inside a separate thread of execution.
*
* @param tf a boolean
value
*/
private synchronized void block(boolean tf) {
if (tf) {
try {
// only block if thread is still doing something useful!
if (m_evaluateThread != null && m_evaluateThread.isAlive()) {
wait();
}
} catch (InterruptedException ex) {
}
} else {
notifyAll();
}
}
/**
* Return an enumeration of user activated requests for this bean
*
* @return an Enumeration
value
*/
@Override
public Enumeration enumerateRequests() {
Vector newVector = new Vector(0);
if (m_evaluateThread != null) {
newVector.addElement("Stop");
}
return newVector.elements();
}
/**
* Perform the named request
*
* @param request the request to perform
* @exception IllegalArgumentException if an error occurs
*/
@Override
public void performRequest(String request) {
if (request.compareTo("Stop") == 0) {
stop();
} else {
throw new IllegalArgumentException(request
+ " not supported (ClustererPerformanceEvaluator)");
}
}
/**
* Add a text listener
*
* @param cl a TextListener
value
*/
public synchronized void addTextListener(TextListener cl) {
m_textListeners.addElement(cl);
}
/**
* Remove a text listener
*
* @param cl a TextListener
value
*/
public synchronized void removeTextListener(TextListener cl) {
m_textListeners.remove(cl);
}
/**
* Notify all text listeners of a TextEvent
*
* @param te a TextEvent
value
*/
@SuppressWarnings("unchecked")
private void notifyTextListeners(TextEvent te) {
Vector l;
synchronized (this) {
l = (Vector) m_textListeners.clone();
}
if (l.size() > 0) {
for (int i = 0; i < l.size(); i++) {
// System.err.println("Notifying text listeners "
// +"(ClustererPerformanceEvaluator)");
l.elementAt(i).acceptText(te);
}
}
}
/**
* Returns true, if at the current time, the named event could be generated.
* Assumes that supplied event names are names of events that could be
* generated by this bean.
*
* @param eventName the name of the event in question
* @return true if the named event could be generated at this point in time
*/
@Override
public boolean eventGeneratable(String eventName) {
if (m_listenee == null) {
return false;
}
if (m_listenee instanceof EventConstraints) {
if (!((EventConstraints) m_listenee).eventGeneratable("batchClusterer")) {
return false;
}
}
return true;
}
private String statusMessagePrefix() {
return getCustomName() + "$" + hashCode() + "|";
}
}
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