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The Waikato Environment for Knowledge Analysis (WEKA), a machine
learning workbench. This version represents the developer version, the
"bleeding edge" of development, you could say. New functionality gets added
to this version.
/*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation, either version 3 of the License, or
* (at your option) any later version.
*
* This program is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with this program. If not, see .
*/
/*
* AssociationsPanel.java
* Copyright (C) 1999-2012 University of Waikato, Hamilton, New Zealand
*
*/
package weka.gui.explorer;
import weka.associations.AssociationRules;
import weka.associations.Associator;
import weka.associations.FPGrowth;
import weka.core.Attribute;
import weka.core.Capabilities;
import weka.core.CapabilitiesHandler;
import weka.core.Defaults;
import weka.core.Drawable;
import weka.core.Environment;
import weka.core.Instances;
import weka.core.OptionHandler;
import weka.core.PluginManager;
import weka.core.Settings;
import weka.core.Utils;
import weka.core.WekaPackageClassLoaderManager;
import weka.gui.AbstractPerspective;
import weka.gui.GenericObjectEditor;
import weka.gui.Logger;
import weka.gui.PerspectiveInfo;
import weka.gui.PropertyPanel;
import weka.gui.ResultHistoryPanel;
import weka.gui.SaveBuffer;
import weka.gui.SysErrLog;
import weka.gui.TaskLogger;
import weka.gui.explorer.Explorer.CapabilitiesFilterChangeEvent;
import weka.gui.explorer.Explorer.CapabilitiesFilterChangeListener;
import weka.gui.explorer.Explorer.ExplorerPanel;
import weka.gui.explorer.Explorer.LogHandler;
import weka.gui.treevisualizer.PlaceNode2;
import weka.gui.treevisualizer.TreeVisualizer;
import weka.gui.visualize.plugins.AssociationRuleVisualizePlugin;
import weka.gui.visualize.plugins.TreeVisualizePlugin;
import javax.swing.*;
import javax.swing.event.ChangeEvent;
import javax.swing.event.ChangeListener;
import java.awt.BorderLayout;
import java.awt.Color;
import java.awt.Font;
import java.awt.GridBagConstraints;
import java.awt.GridBagLayout;
import java.awt.GridLayout;
import java.awt.Point;
import java.awt.event.ActionEvent;
import java.awt.event.ActionListener;
import java.awt.event.InputEvent;
import java.awt.event.MouseAdapter;
import java.awt.event.MouseEvent;
import java.beans.PropertyChangeEvent;
import java.beans.PropertyChangeListener;
import java.text.SimpleDateFormat;
import java.util.Date;
import java.util.List;
import java.util.Vector;
/**
* This panel allows the user to select, configure, and run a scheme that learns
* associations.
*
* @author Eibe Frank ([email protected])
* @version $Revision: 15678 $
*/
@PerspectiveInfo(ID = "weka.gui.explorer.associationspanel",
title = "Associate", toolTipText = "Discover association rules",
iconPath = "weka/gui/weka_icon_new_small.png")
public class AssociationsPanel extends AbstractPerspective implements
CapabilitiesFilterChangeListener, ExplorerPanel, LogHandler {
/** for serialization */
static final long serialVersionUID = -6867871711865476971L;
/** the parent frame */
protected Explorer m_Explorer = null;
/** Lets the user configure the associator */
protected GenericObjectEditor m_AssociatorEditor = new GenericObjectEditor();
/** The panel showing the current associator selection */
protected PropertyPanel m_CEPanel = new PropertyPanel(m_AssociatorEditor);
/** The output area for associations */
protected JTextArea m_OutText = new JTextArea(20, 40);
/** The destination for log/status messages */
protected Logger m_Log = new SysErrLog();
/** The buffer saving object for saving output */
protected SaveBuffer m_SaveOut = new SaveBuffer(m_Log, this);
/** A panel controlling results viewing */
protected ResultHistoryPanel m_History = new ResultHistoryPanel(m_OutText);
/** Click to start running the associator */
protected JButton m_StartBut = new JButton("Start");
/** Click to stop a running associator */
protected JButton m_StopBut = new JButton("Stop");
/**
* Whether to store any graph or xml rules output in the history list
*/
protected JCheckBox m_storeOutput = new JCheckBox(
"Store output for visualization");
/** The main set of instances we're playing with */
protected Instances m_Instances;
/** The user-supplied test set (if any) */
protected Instances m_TestInstances;
/** A thread that associator runs in */
protected Thread m_RunThread;
/**
* Whether start-up settings have been applied (i.e. initial default
* associator to use
*/
protected boolean m_initialSettingsSet;
/* Register the property editors we need */
static {
GenericObjectEditor.registerEditors();
}
/**
* Creates the associator panel
*/
public AssociationsPanel() {
// Connect / configure the components
m_OutText.setEditable(false);
m_OutText.setFont(new Font("Monospaced", Font.PLAIN, 12));
m_OutText.setBorder(BorderFactory.createEmptyBorder(5, 5, 5, 5));
m_OutText.addMouseListener(new MouseAdapter() {
@Override
public void mouseClicked(MouseEvent e) {
if ((e.getModifiers() & InputEvent.BUTTON1_MASK) != InputEvent.BUTTON1_MASK) {
m_OutText.selectAll();
}
}
});
JPanel historyHolder = new JPanel(new BorderLayout());
historyHolder.setBorder(BorderFactory
.createTitledBorder("Result list (right-click for options)"));
historyHolder.add(m_History, BorderLayout.CENTER);
m_History.setHandleRightClicks(false);
// see if we can popup a menu for the selected result
m_History.getList().addMouseListener(new MouseAdapter() {
@Override
public void mouseClicked(MouseEvent e) {
if (((e.getModifiers() & InputEvent.BUTTON1_MASK) != InputEvent.BUTTON1_MASK)
|| e.isAltDown()) {
int index = m_History.getList().locationToIndex(e.getPoint());
if (index != -1) {
List selectedEls =
(List) m_History.getList().getSelectedValuesList();
historyRightClickPopup(selectedEls, e.getX(), e.getY());
} else {
historyRightClickPopup(null, e.getX(), e.getY());
}
}
}
});
m_AssociatorEditor.setClassType(Associator.class);
m_AssociatorEditor.setValue(ExplorerDefaults.getAssociator());
m_AssociatorEditor.addPropertyChangeListener(new PropertyChangeListener() {
@Override
public void propertyChange(PropertyChangeEvent e) {
m_StartBut.setEnabled(true);
// Check capabilities
Capabilities currentFilter = m_AssociatorEditor.getCapabilitiesFilter();
Associator associator = (Associator) m_AssociatorEditor.getValue();
Capabilities currentSchemeCapabilities = null;
if (associator != null && currentFilter != null
&& (associator instanceof CapabilitiesHandler)) {
currentSchemeCapabilities =
((CapabilitiesHandler) associator).getCapabilities();
if (!currentSchemeCapabilities.supportsMaybe(currentFilter)
&& !currentSchemeCapabilities.supports(currentFilter)) {
m_StartBut.setEnabled(false);
}
}
repaint();
}
});
m_StartBut.setToolTipText("Starts the associator");
m_StopBut.setToolTipText("Stops the associator");
m_StartBut.setEnabled(false);
m_StopBut.setEnabled(false);
m_StartBut.addActionListener(new ActionListener() {
@Override
public void actionPerformed(ActionEvent e) {
boolean proceed = true;
if (Explorer.m_Memory.memoryIsLow()) {
proceed = Explorer.m_Memory.showMemoryIsLow();
}
if (proceed) {
startAssociator();
}
}
});
m_StopBut.addActionListener(new ActionListener() {
@Override
public void actionPerformed(ActionEvent e) {
stopAssociator();
}
});
// check for any visualization plugins so that we
// can add a checkbox for storing graphs or rules
boolean showStoreOutput =
(PluginManager.getPluginNamesOfTypeList(AssociationRuleVisualizePlugin.class.getName()).size() > 0 ||
PluginManager.getPluginNamesOfTypeList(TreeVisualizePlugin.class.getName()).size() > 0);
// Layout the GUI
JPanel p1 = new JPanel();
p1.setBorder(BorderFactory.createCompoundBorder(
BorderFactory.createTitledBorder("Associator"),
BorderFactory.createEmptyBorder(0, 5, 5, 5)));
p1.setLayout(new BorderLayout());
p1.add(m_CEPanel, BorderLayout.NORTH);
JPanel buttons = new JPanel();
buttons.setLayout(new BorderLayout());
JPanel buttonsP = new JPanel();
buttonsP.setLayout(new GridLayout(1, 2));
JPanel ssButs = new JPanel();
ssButs.setBorder(BorderFactory.createEmptyBorder(5, 5, 5, 5));
ssButs.setLayout(new GridLayout(1, 2, 5, 5));
ssButs.add(m_StartBut);
ssButs.add(m_StopBut);
buttonsP.add(ssButs);
buttons.add(buttonsP, BorderLayout.SOUTH);
if (showStoreOutput) {
buttons.add(m_storeOutput, BorderLayout.NORTH);
}
JPanel p3 = new JPanel();
p3.setBorder(BorderFactory.createTitledBorder("Associator output"));
p3.setLayout(new BorderLayout());
final JScrollPane js = new JScrollPane(m_OutText);
p3.add(js, BorderLayout.CENTER);
js.getViewport().addChangeListener(new ChangeListener() {
private int lastHeight;
@Override
public void stateChanged(ChangeEvent e) {
JViewport vp = (JViewport) e.getSource();
int h = vp.getViewSize().height;
if (h != lastHeight) { // i.e. an addition not just a user scrolling
lastHeight = h;
int x = h - vp.getExtentSize().height;
vp.setViewPosition(new Point(0, x));
}
}
});
GridBagLayout gbL = new GridBagLayout();
GridBagConstraints gbC = new GridBagConstraints();
JPanel mondo = new JPanel();
gbL = new GridBagLayout();
mondo.setLayout(gbL);
gbC = new GridBagConstraints();
gbC.anchor = GridBagConstraints.NORTH;
gbC.fill = GridBagConstraints.HORIZONTAL;
gbC.gridy = 1;
gbC.gridx = 0;
gbL.setConstraints(buttons, gbC);
mondo.add(buttons);
gbC = new GridBagConstraints();
gbC.fill = GridBagConstraints.BOTH;
gbC.gridy = 2;
gbC.gridx = 0;
gbC.weightx = 0;
gbL.setConstraints(historyHolder, gbC);
mondo.add(historyHolder);
gbC = new GridBagConstraints();
gbC.fill = GridBagConstraints.BOTH;
gbC.gridy = 0;
gbC.gridx = 1;
gbC.gridheight = 3;
gbC.weightx = 100;
gbC.weighty = 100;
gbL.setConstraints(p3, gbC);
mondo.add(p3);
setLayout(new BorderLayout());
add(p1, BorderLayout.NORTH);
add(mondo, BorderLayout.CENTER);
}
/**
* Sets the Logger to receive informational messages
*
* @param newLog the Logger that will now get info messages
*/
@Override
public void setLog(Logger newLog) {
m_Log = newLog;
}
/**
* Tells the panel to use a new set of instances.
*
* @param inst a set of Instances
*/
@Override
public void setInstances(Instances inst) {
m_Instances = inst;
String[] attribNames = new String[m_Instances.numAttributes()];
for (int i = 0; i < attribNames.length; i++) {
String type =
"(" + Attribute.typeToStringShort(m_Instances.attribute(i)) + ") ";
attribNames[i] = type + m_Instances.attribute(i).name();
}
m_StartBut.setEnabled(m_RunThread == null);
m_StopBut.setEnabled(m_RunThread != null);
}
/**
* Starts running the currently configured associator with the current
* settings. This is run in a separate thread, and will only start if there is
* no associator already running. The associator output is sent to the results
* history panel.
*/
protected void startAssociator() {
if (m_RunThread == null) {
m_StartBut.setEnabled(false);
m_StopBut.setEnabled(true);
m_RunThread = new Thread() {
@Override
public void run() {
m_CEPanel.addToHistory();
// Copy the current state of things
m_Log.statusMessage("Setting up...");
Instances inst = new Instances(m_Instances);
inst.setClassIndex(-1);
String grph = null;
// String xmlRules = null;
AssociationRules rulesList = null;
Associator associator = (Associator) m_AssociatorEditor.getValue();
StringBuffer outBuff = new StringBuffer();
String name =
(new SimpleDateFormat("HH:mm:ss - ")).format(new Date());
String cname = associator.getClass().getName();
if (cname.startsWith("weka.associations.")) {
name += cname.substring("weka.associations.".length());
} else {
name += cname;
}
String cmd = m_AssociatorEditor.getValue().getClass().getName();
if (m_AssociatorEditor.getValue() instanceof OptionHandler) {
cmd +=
" "
+ Utils.joinOptions(((OptionHandler) m_AssociatorEditor
.getValue()).getOptions());
}
try {
// Output some header information
m_Log.logMessage("Started " + cname);
m_Log.logMessage("Command: " + cmd);
if (m_Log instanceof TaskLogger) {
((TaskLogger) m_Log).taskStarted();
}
outBuff.append("=== Run information ===\n\n");
outBuff.append("Scheme: " + cname);
if (associator instanceof OptionHandler) {
String[] o = ((OptionHandler) associator).getOptions();
outBuff.append(" " + Utils.joinOptions(o));
}
outBuff.append("\n");
outBuff.append("Relation: " + inst.relationName() + '\n');
outBuff.append("Instances: " + inst.numInstances() + '\n');
outBuff.append("Attributes: " + inst.numAttributes() + '\n');
if (inst.numAttributes() < 100) {
for (int i = 0; i < inst.numAttributes(); i++) {
outBuff.append(" " + inst.attribute(i).name()
+ '\n');
}
} else {
outBuff.append(" [list of attributes omitted]\n");
}
m_History.addResult(name, outBuff);
m_History.setSingle(name);
// Build the model and output it.
m_Log.statusMessage("Building model on training data...");
associator.buildAssociations(inst);
outBuff.append("=== Associator model (full training set) ===\n\n");
outBuff.append(associator.toString() + '\n');
m_History.updateResult(name);
if (m_storeOutput.isSelected()) {
if (associator instanceof Drawable) {
grph = null;
try {
grph = ((Drawable) associator).graph();
} catch (Exception ex) {
}
}
if (associator instanceof weka.associations.AssociationRulesProducer) {
// xmlRules = null;
rulesList = null;
try {
// xmlRules =
// ((weka.associations.XMLRulesProducer)associator).xmlRules();
rulesList =
((weka.associations.AssociationRulesProducer) associator)
.getAssociationRules();
} catch (Exception ex) {
}
}
}
m_Log.logMessage("Finished " + cname);
m_Log.statusMessage("OK");
} catch (Exception ex) {
m_Log.logMessage(ex.getMessage());
m_Log.statusMessage("See error log");
} finally {
Vector
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