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Client API for accessing Airavata Services
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///*
// *
// * Licensed to the Apache Software Foundation (ASF) under one
// * or more contributor license agreements. See the NOTICE file
// * distributed with this work for additional information
// * regarding copyright ownership. The ASF licenses this file
// * to you under the Apache License, Version 2.0 (the
// * "License"); you may not use this file except in compliance
// * with the License. You may obtain a copy of the License at
// *
// * http://www.apache.org/licenses/LICENSE-2.0
// *
// * Unless required by applicable law or agreed to in writing,
// * software distributed under the License is distributed on an
// * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
// * KIND, either express or implied. See the License for the
// * specific language governing permissions and limitations
// * under the License.
// *
//*/
//package org.apache.airavata.client.tools;
//
//import java.io.File;
//import java.util.ArrayList;
//import java.util.Date;
//import java.util.List;
//import java.util.UUID;
//
//import org.apache.airavata.client.api.AiravataAPI;
//import org.apache.airavata.client.api.exception.AiravataAPIInvocationException;
//import org.apache.airavata.commons.gfac.type.ApplicationDescription;
//import org.apache.airavata.commons.gfac.type.HostDescription;
//import org.apache.airavata.commons.gfac.type.ServiceDescription;
//import org.apache.airavata.schemas.gfac.*;
//
//public class DocumentCreator {
//
// private AiravataAPI airavataAPI = null;
// private String trestleshpcHostAddress = "trestles.sdsc.edu";
// private String lonestarHostAddress = "lonestar.tacc.utexas.edu";
// private String stampedeHostAddress = "stampede.tacc.xsede.org";
// private String gridftpAddress = "gsiftp://trestles-dm1.sdsc.edu:2811";
// private String gramAddress = "trestles-login1.sdsc.edu:2119/jobmanager-pbstest2";
// private String bigRed2HostAddress = "bigred2.uits.iu.edu";
//
//
// public DocumentCreator(AiravataAPI airavataAPI) {
// this.airavataAPI = airavataAPI;
// }
//
// public void createLocalHostDocs() {
// HostDescription descriptor = new HostDescription();
// descriptor.getType().setHostName("localhost");
// descriptor.getType().setHostAddress("127.0.0.1");
// try {
// airavataAPI.getApplicationManager().saveHostDescription(descriptor);
// } catch (AiravataAPIInvocationException e) {
// e.printStackTrace(); //To change body of catch statement use File | Settings | File Templates.
// }
//
// String serviceName = "SimpleEcho0";
// ServiceDescription serviceDescription = new ServiceDescription();
// List inputParameters = new ArrayList();
// List outputParameters = new ArrayList();
// serviceDescription.getType().setName(serviceName);
// serviceDescription.getType().setDescription("Echo service");
// // Creating input parameters
// InputParameterType parameter = InputParameterType.Factory.newInstance();
// parameter.setParameterName("echo_input");
// parameter.setParameterDescription("echo input");
// ParameterType parameterType = parameter.addNewParameterType();
// parameterType.setType(DataType.STRING);
// parameterType.setName("String");
// inputParameters.add(parameter);
//
// // Creating output parameters
// OutputParameterType outputParameter = OutputParameterType.Factory.newInstance();
// outputParameter.setParameterName("echo_output");
// outputParameter.setParameterDescription("Echo output");
// ParameterType outputParaType = outputParameter.addNewParameterType();
// outputParaType.setType(DataType.STRING);
// outputParaType.setName("String");
// outputParameters.add(outputParameter);
//
// // Setting input and output parameters to serviceDescriptor
// serviceDescription.getType().setInputParametersArray(inputParameters.toArray(new InputParameterType[]{}));
// serviceDescription.getType().setOutputParametersArray(outputParameters.toArray(new OutputParameterType[]{}));
//
// try {
// airavataAPI.getApplicationManager().saveServiceDescription(serviceDescription);
// } catch (AiravataAPIInvocationException e) {
// e.printStackTrace(); //To change body of catch statement use File | Settings | File Templates.
// }
//
// ApplicationDescription applicationDeploymentDescription = new ApplicationDescription();
// ApplicationDeploymentDescriptionType applicationDeploymentDescriptionType = applicationDeploymentDescription
// .getType();
// applicationDeploymentDescriptionType.addNewApplicationName().setStringValue("EchoApplication");
// applicationDeploymentDescriptionType.setExecutableLocation("/bin/echo");
// applicationDeploymentDescriptionType.setScratchWorkingDirectory("/tmp");
//
// try {
// airavataAPI.getApplicationManager().saveApplicationDescription(serviceName, "localhost", applicationDeploymentDescription);
// } catch (AiravataAPIInvocationException e) {
// e.printStackTrace(); //To change body of catch statement use File | Settings | File Templates.
// }
// }
//
//
// public void createSSHHostDocs() {
// HostDescription descriptor = new HostDescription(SSHHostType.type);
// descriptor.getType().setHostName("gw111.iu.xsede.org");
// descriptor.getType().setHostAddress("gw111.iu.xsede.org");
// try {
// airavataAPI.getApplicationManager().saveHostDescription(descriptor);
// } catch (AiravataAPIInvocationException e) {
// e.printStackTrace(); //To change body of catch statement use File | Settings | File Templates.
// }
//
// String serviceName = "SSHEcho1";
// ServiceDescription serviceDescription = new ServiceDescription();
// List inputParameters = new ArrayList();
// List outputParameters = new ArrayList();
// serviceDescription.getType().setName(serviceName);
// serviceDescription.getType().setDescription("Echo service");
// // Creating input parameters
// InputParameterType parameter = InputParameterType.Factory.newInstance();
// parameter.setParameterName("echo_input");
// parameter.setParameterDescription("echo input");
// ParameterType parameterType = parameter.addNewParameterType();
// parameterType.setType(DataType.STRING);
// parameterType.setName("String");
// inputParameters.add(parameter);
//
// // Creating output parameters
// OutputParameterType outputParameter = OutputParameterType.Factory.newInstance();
// outputParameter.setParameterName("echo_output");
// outputParameter.setParameterDescription("Echo output");
// ParameterType outputParaType = outputParameter.addNewParameterType();
// outputParaType.setType(DataType.STRING);
// outputParaType.setName("String");
// outputParameters.add(outputParameter);
//
// // Setting input and output parameters to serviceDescriptor
// serviceDescription.getType().setInputParametersArray(inputParameters.toArray(new InputParameterType[]{}));
// serviceDescription.getType().setOutputParametersArray(outputParameters.toArray(new OutputParameterType[]{}));
//
// try {
// airavataAPI.getApplicationManager().saveServiceDescription(serviceDescription);
// } catch (AiravataAPIInvocationException e) {
// e.printStackTrace(); //To change body of catch statement use File | Settings | File Templates.
// }
//
// ApplicationDescription applicationDeploymentDescription = new ApplicationDescription();
// ApplicationDeploymentDescriptionType applicationDeploymentDescriptionType = applicationDeploymentDescription
// .getType();
// applicationDeploymentDescriptionType.addNewApplicationName().setStringValue("SSHEchoApplication");
// applicationDeploymentDescriptionType.setExecutableLocation("/bin/echo");
// applicationDeploymentDescriptionType.setScratchWorkingDirectory("/tmp");
//
// try {
// airavataAPI.getApplicationManager().saveApplicationDescription(serviceName, "gw111.iu.xsede.org", applicationDeploymentDescription);
// } catch (AiravataAPIInvocationException e) {
// e.printStackTrace(); //To change body of catch statement use File | Settings | File Templates.
// }
//
// }
//
// public void createGramDocs() {
// /*
// creating host descriptor for gram
// */
// HostDescription host = new HostDescription(GlobusHostType.type);
// host.getType().setHostAddress(trestleshpcHostAddress);
// host.getType().setHostName(trestleshpcHostAddress);
// ((GlobusHostType) host.getType()).setGlobusGateKeeperEndPointArray(new String[]{gramAddress});
// ((GlobusHostType) host.getType()).setGridFTPEndPointArray(new String[]{gridftpAddress});
// try {
// airavataAPI.getApplicationManager().saveHostDescription(host);
// } catch (AiravataAPIInvocationException e) {
// e.printStackTrace(); //To change body of catch statement use File | Settings | File Templates.
// }
//
//
// /*
// * Service Description creation and saving
// */
// String serviceName = "SimpleEcho1";
// ServiceDescription serv = new ServiceDescription();
// serv.getType().setName(serviceName);
//
// List inputList = new ArrayList();
// List outputList = new ArrayList();
//
// InputParameterType input = InputParameterType.Factory.newInstance();
// input.setParameterName("echo_input");
// ParameterType parameterType = input.addNewParameterType();
// parameterType.setType(DataType.STRING);
// parameterType.setName("String");
//
// OutputParameterType output = OutputParameterType.Factory.newInstance();
// output.setParameterName("echo_output");
// ParameterType parameterType1 = output.addNewParameterType();
// parameterType1.setType(DataType.STRING);
// parameterType1.setName("String");
//
// inputList.add(input);
// outputList.add(output);
//
// InputParameterType[] inputParamList = inputList.toArray(new InputParameterType[inputList.size()]);
// OutputParameterType[] outputParamList = outputList.toArray(new OutputParameterType[outputList.size()]);
//
// serv.getType().setInputParametersArray(inputParamList);
// serv.getType().setOutputParametersArray(outputParamList);
// try {
// airavataAPI.getApplicationManager().saveServiceDescription(serv);
// } catch (AiravataAPIInvocationException e) {
// e.printStackTrace();
// }
//
// /*
// Application descriptor creation and saving
// */
// ApplicationDescription appDesc = new ApplicationDescription(HpcApplicationDeploymentType.type);
// HpcApplicationDeploymentType app = (HpcApplicationDeploymentType) appDesc.getType();
// ApplicationDeploymentDescriptionType.ApplicationName name = ApplicationDeploymentDescriptionType.ApplicationName.Factory.newInstance();
// name.setStringValue("EchoLocal");
// app.setApplicationName(name);
// ProjectAccountType projectAccountType = app.addNewProjectAccount();
// projectAccountType.setProjectAccountNumber("sds128");
//
// QueueType queueType = app.addNewQueue();
// queueType.setQueueName("normal");
//
// app.setCpuCount(1);
// app.setJobType(JobTypeType.SERIAL);
// app.setNodeCount(1);
// app.setProcessorsPerNode(1);
//
// /*
// * Use bat file if it is compiled on Windows
// */
// app.setExecutableLocation("/bin/echo");
//
// /*
// * Default tmp location
// */
// String tempDir = "/home/ogce/scratch";
// app.setScratchWorkingDirectory(tempDir);
// app.setMaxMemory(10);
//
//
// try {
// airavataAPI.getApplicationManager().saveApplicationDescription(serviceName, trestleshpcHostAddress, appDesc);
// } catch (AiravataAPIInvocationException e) {
// e.printStackTrace(); //To change body of catch statement use File | Settings | File Templates.
// }
// }
//
// public void createPBSDocsForOGCE() {
// HostDescription host = new HostDescription(GsisshHostType.type);
// host.getType().setHostAddress(trestleshpcHostAddress);
// host.getType().setHostName(trestleshpcHostAddress);
// ((GsisshHostType) host.getType()).setPort(22);
// ((GsisshHostType) host.getType()).setInstalledPath("/opt/torque/bin/");
//
// try {
// airavataAPI.getApplicationManager().saveHostDescription(host);
// } catch (AiravataAPIInvocationException e) {
// e.printStackTrace(); //To change body of catch statement use File | Settings | File Templates.
// }
// /*
// * Service Description creation and saving
// */
// String serviceName = "SimpleEcho2";
// ServiceDescription serv = new ServiceDescription();
// serv.getType().setName(serviceName);
//
// List inputList = new ArrayList();
// List outputList = new ArrayList();
//
//
// InputParameterType input = InputParameterType.Factory.newInstance();
// input.setParameterName("echo_input");
// ParameterType parameterType = input.addNewParameterType();
// parameterType.setType(DataType.STRING);
// parameterType.setName("String");
//
// OutputParameterType output = OutputParameterType.Factory.newInstance();
// output.setParameterName("echo_output");
// ParameterType parameterType1 = output.addNewParameterType();
// parameterType1.setType(DataType.STRING);
// parameterType1.setName("String");
//
// inputList.add(input);
// outputList.add(output);
//
// InputParameterType[] inputParamList = inputList.toArray(new InputParameterType[inputList.size()]);
// OutputParameterType[] outputParamList = outputList.toArray(new OutputParameterType[outputList.size()]);
//
// serv.getType().setInputParametersArray(inputParamList);
// serv.getType().setOutputParametersArray(outputParamList);
// try {
// airavataAPI.getApplicationManager().saveServiceDescription(serv);
// } catch (AiravataAPIInvocationException e) {
// e.printStackTrace(); //To change body of catch statement use File | Settings | File Templates.
// }
//
// /*
// Application descriptor creation and saving
// */
// ApplicationDescription appDesc = new ApplicationDescription(HpcApplicationDeploymentType.type);
// HpcApplicationDeploymentType app = (HpcApplicationDeploymentType) appDesc.getType();
// ApplicationDeploymentDescriptionType.ApplicationName name = ApplicationDeploymentDescriptionType.ApplicationName.Factory.newInstance();
// name.setStringValue("EchoLocal");
// app.setApplicationName(name);
// ProjectAccountType projectAccountType = app.addNewProjectAccount();
// projectAccountType.setProjectAccountNumber("sds128");
//
// QueueType queueType = app.addNewQueue();
// queueType.setQueueName("normal");
//
// app.setCpuCount(1);
// app.setJobType(JobTypeType.SERIAL);
// app.setNodeCount(1);
// app.setProcessorsPerNode(1);
// app.setMaxWallTime(10);
// /*
// * Use bat file if it is compiled on Windows
// */
// app.setExecutableLocation("/bin/echo");
//
// /*
// * Default tmp location
// */
// String tempDir = "/oasis/scratch/trestles/ogce/temp_project/";
//
//
// app.setScratchWorkingDirectory(tempDir);
// app.setInstalledParentPath("/opt/torque/bin/");
//
// try {
// airavataAPI.getApplicationManager().saveApplicationDescription(serviceName, trestleshpcHostAddress, appDesc);
// } catch (AiravataAPIInvocationException e) {
// e.printStackTrace(); //To change body of catch statement use File | Settings | File Templates.
// }
//
// /*
// * Service Description creation and saving
// */
// String wrfserviceName = "WRF";
// ServiceDescription wrfServ = new ServiceDescription();
// wrfServ.getType().setName(wrfserviceName);
//
// List wrfinputList = new ArrayList();
// List wrfoutputList = new ArrayList();
//
//
// InputParameterType wrfinput1 = InputParameterType.Factory.newInstance();
// wrfinput1.setParameterName("WRF_Namelist");
// ParameterType wrfparameterType1 = wrfinput1.addNewParameterType();
// wrfparameterType1.setType(DataType.URI);
// wrfparameterType1.setName("URI");
//
// InputParameterType wrfinput2 = InputParameterType.Factory.newInstance();
// wrfinput2.setParameterName("WRF_Input_File");
// ParameterType wrfparameterType2 = wrfinput2.addNewParameterType();
// wrfparameterType2.setType(DataType.URI);
// wrfparameterType2.setName("URI");
//
// InputParameterType wrfinput3 = InputParameterType.Factory.newInstance();
// wrfinput3.setParameterName("WRF_Boundary_File");
// ParameterType wrfparameterType3 = wrfinput3.addNewParameterType();
// wrfparameterType3.setType(DataType.URI);
// wrfparameterType3.setName("URI");
//
// OutputParameterType wrfOutput1 = OutputParameterType.Factory.newInstance();
// wrfOutput1.setParameterName("WRF_Output");
// ParameterType wrfoutparameterType1 = wrfOutput1.addNewParameterType();
// wrfoutparameterType1.setType(DataType.URI);
// wrfoutparameterType1.setName("URI");
//
// OutputParameterType wrfOutput2 = OutputParameterType.Factory.newInstance();
// wrfOutput2.setParameterName("WRF_Execution_Log");
// ParameterType wrfoutparameterType2 = wrfOutput2.addNewParameterType();
// wrfoutparameterType2.setType(DataType.URI);
// wrfoutparameterType2.setName("URI");
//
// wrfinputList.add(wrfinput1);
// wrfinputList.add(wrfinput2);
// wrfinputList.add(wrfinput3);
// wrfoutputList.add(wrfOutput1);
// wrfoutputList.add(wrfOutput2);
//
// InputParameterType[] wrfinputParamList = wrfinputList.toArray(new InputParameterType[wrfinputList.size()]);
// OutputParameterType[] wrfoutputParamList = wrfoutputList.toArray(new OutputParameterType[wrfoutputList.size()]);
//
// wrfServ.getType().setInputParametersArray(wrfinputParamList);
// wrfServ.getType().setOutputParametersArray(wrfoutputParamList);
// try {
// airavataAPI.getApplicationManager().saveServiceDescription(wrfServ);
// } catch (AiravataAPIInvocationException e) {
// e.printStackTrace(); //To change body of catch statement use File | Settings | File Templates.
// }
//
// /*
// Application descriptor creation and saving
// */
// ApplicationDescription wrfAppDesc = new ApplicationDescription(HpcApplicationDeploymentType.type);
// HpcApplicationDeploymentType wrfApp = (HpcApplicationDeploymentType) wrfAppDesc.getType();
// ApplicationDeploymentDescriptionType.ApplicationName wrfName = ApplicationDeploymentDescriptionType.ApplicationName.Factory.newInstance();
// wrfName.setStringValue("WRF");
// wrfApp.setApplicationName(wrfName);
// ProjectAccountType wrfprojectAccountType = wrfApp.addNewProjectAccount();
// wrfprojectAccountType.setProjectAccountNumber("sds128");
//
// QueueType wrfQueueType = wrfApp.addNewQueue();
// wrfQueueType.setQueueName("normal");
//
// wrfApp.setCpuCount(32);
// wrfApp.setJobType(JobTypeType.MPI);
// wrfApp.setNodeCount(2);
// wrfApp.setProcessorsPerNode(1);
// wrfApp.setMaxWallTime(30);
// /*
// * Use bat file if it is compiled on Windows
// */
// wrfApp.setExecutableLocation("/home/ogce/apps/wrf_wrapper.sh");
//
// /*
// * Default tmp location
// */
// String wrfTempDir = "/oasis/scratch/trestles/ogce/temp_project/";
//
// wrfApp.setScratchWorkingDirectory(wrfTempDir);
// wrfApp.setInstalledParentPath("/opt/torque/bin/");
//
// try {
// airavataAPI.getApplicationManager().saveApplicationDescription(wrfserviceName, trestleshpcHostAddress, wrfAppDesc);
// } catch (AiravataAPIInvocationException e) {
// e.printStackTrace(); //To change body of catch statement use File | Settings | File Templates.
// }
// }
//
//
// public void createSlurmDocs() {
// HostDescription host = new HostDescription(GsisshHostType.type);
// host.getType().setHostAddress(stampedeHostAddress);
// host.getType().setHostName(stampedeHostAddress);
// ((GsisshHostType) host.getType()).setJobManager("slurm");
// ((GsisshHostType) host.getType()).setInstalledPath("/usr/bin/");
// ((GsisshHostType) host.getType()).setPort(2222);
// ((GsisshHostType) host.getType()).setMonitorMode("push");
//
//
// try {
// airavataAPI.getApplicationManager().saveHostDescription(host);
// } catch (AiravataAPIInvocationException e) {
// e.printStackTrace(); //To change body of catch statement use File | Settings | File Templates.
// }
// /*
// * Service Description creation and saving
// */
// String serviceName = "SimpleEcho3";
// ServiceDescription serv = new ServiceDescription();
// serv.getType().setName(serviceName);
//
// List inputList = new ArrayList();
// List outputList = new ArrayList();
//
//
// InputParameterType input = InputParameterType.Factory.newInstance();
// input.setParameterName("echo_input");
// ParameterType parameterType = input.addNewParameterType();
// parameterType.setType(DataType.STRING);
// parameterType.setName("String");
//
// OutputParameterType output = OutputParameterType.Factory.newInstance();
// output.setParameterName("echo_output");
// ParameterType parameterType1 = output.addNewParameterType();
// parameterType1.setType(DataType.STRING);
// parameterType1.setName("String");
//
// inputList.add(input);
// outputList.add(output);
//
// InputParameterType[] inputParamList = inputList.toArray(new InputParameterType[inputList.size()]);
// OutputParameterType[] outputParamList = outputList.toArray(new OutputParameterType[outputList.size()]);
//
// serv.getType().setInputParametersArray(inputParamList);
// serv.getType().setOutputParametersArray(outputParamList);
// try {
// airavataAPI.getApplicationManager().saveServiceDescription(serv);
// } catch (AiravataAPIInvocationException e) {
// e.printStackTrace(); //To change body of catch statement use File | Settings | File Templates.
// }
//
// /*
// Application descriptor creation and saving
// */
// ApplicationDescription appDesc = new ApplicationDescription(HpcApplicationDeploymentType.type);
// HpcApplicationDeploymentType app = (HpcApplicationDeploymentType) appDesc.getType();
// ApplicationDeploymentDescriptionType.ApplicationName name = ApplicationDeploymentDescriptionType.ApplicationName.Factory.newInstance();
// name.setStringValue("EchoLocal");
// app.setApplicationName(name);
// ProjectAccountType projectAccountType = app.addNewProjectAccount();
// projectAccountType.setProjectAccountNumber("TG-STA110014S");
//
// QueueType queueType = app.addNewQueue();
// queueType.setQueueName("normal");
//
// app.setCpuCount(1);
// app.setJobType(JobTypeType.SERIAL);
// app.setNodeCount(1);
// app.setProcessorsPerNode(1);
// app.setMaxWallTime(10);
// /*
// * Use bat file if it is compiled on Windows
// */
// app.setExecutableLocation("/bin/echo");
//
// /*
// * Default tmp location
// */
// String tempDir = "/home1/01437/ogce";
//
//
// app.setScratchWorkingDirectory(tempDir);
// app.setInstalledParentPath("/usr/bin/");
//
// try {
// airavataAPI.getApplicationManager().saveApplicationDescription(serviceName, stampedeHostAddress, appDesc);
// } catch (AiravataAPIInvocationException e) {
// e.printStackTrace(); //To change body of catch statement use File | Settings | File Templates.
// }
// }
//
// public void createSGEDocs() {
// HostDescription host = new HostDescription(GsisshHostType.type);
// host.getType().setHostAddress(lonestarHostAddress);
// host.getType().setHostName(lonestarHostAddress);
// ((GsisshHostType) host.getType()).setJobManager("sge");
// ((GsisshHostType) host.getType()).setInstalledPath("/opt/sge6.2/bin/lx24-amd64/");
// ((GsisshHostType) host.getType()).setPort(22);
// try {
// airavataAPI.getApplicationManager().saveHostDescription(host);
// } catch (AiravataAPIInvocationException e) {
// e.printStackTrace(); //To change body of catch statement use File | Settings | File Templates.
// }
// /*
// * Service Description creation and saving
// */
// String serviceName = "SimpleEcho4";
// ServiceDescription serv = new ServiceDescription();
// serv.getType().setName(serviceName);
//
// List inputList = new ArrayList();
// List outputList = new ArrayList();
//
//
// InputParameterType input = InputParameterType.Factory.newInstance();
// input.setParameterName("echo_input");
// ParameterType parameterType = input.addNewParameterType();
// parameterType.setType(DataType.STRING);
// parameterType.setName("String");
//
// OutputParameterType output = OutputParameterType.Factory.newInstance();
// output.setParameterName("echo_output");
// ParameterType parameterType1 = output.addNewParameterType();
// parameterType1.setType(DataType.STRING);
// parameterType1.setName("String");
//
// inputList.add(input);
// outputList.add(output);
//
// InputParameterType[] inputParamList = inputList.toArray(new InputParameterType[inputList.size()]);
// OutputParameterType[] outputParamList = outputList.toArray(new OutputParameterType[outputList.size()]);
//
// serv.getType().setInputParametersArray(inputParamList);
// serv.getType().setOutputParametersArray(outputParamList);
// try {
// airavataAPI.getApplicationManager().saveServiceDescription(serv);
// } catch (AiravataAPIInvocationException e) {
// e.printStackTrace(); //To change body of catch statement use File | Settings | File Templates.
// }
//
// /*
// Application descriptor creation and saving
// */
// ApplicationDescription appDesc = new ApplicationDescription(HpcApplicationDeploymentType.type);
// HpcApplicationDeploymentType app = (HpcApplicationDeploymentType) appDesc.getType();
// ApplicationDeploymentDescriptionType.ApplicationName name = ApplicationDeploymentDescriptionType.ApplicationName.Factory.newInstance();
// name.setStringValue("EchoLocal");
// app.setApplicationName(name);
// ProjectAccountType projectAccountType = app.addNewProjectAccount();
// projectAccountType.setProjectAccountNumber("TG-STA110014S");
//
// QueueType queueType = app.addNewQueue();
// queueType.setQueueName("normal");
//
// app.setCpuCount(1);
// app.setJobType(JobTypeType.SERIAL);
// app.setNodeCount(1);
// app.setProcessorsPerNode(1);
// app.setMaxWallTime(10);
// /*
// * Use bat file if it is compiled on Windows
// */
// app.setExecutableLocation("/bin/echo");
//
// /*
// * Default tmp location
// */
// String tempDir = "/home1/01437/ogce";
//
//
// app.setScratchWorkingDirectory(tempDir);
// app.setInstalledParentPath("/opt/sge6.2/bin/lx24-amd64/");
//
// try {
// airavataAPI.getApplicationManager().saveApplicationDescription(serviceName, lonestarHostAddress, appDesc);
// } catch (AiravataAPIInvocationException e) {
// e.printStackTrace(); //To change body of catch statement use File | Settings | File Templates.
// }
// }
//
// public void createEchoHostDocs() {
// String serviceName = "Echo";
// ServiceDescription serviceDescription = new ServiceDescription();
// List inputParameters = new ArrayList();
// List outputParameters = new ArrayList();
// serviceDescription.getType().setName(serviceName);
// serviceDescription.getType().setDescription("Echo service");
// // Creating input parameters
// InputParameterType parameter = InputParameterType.Factory.newInstance();
// parameter.setParameterName("echo_input");
// parameter.setParameterDescription("echo input");
// ParameterType parameterType = parameter.addNewParameterType();
// parameterType.setType(DataType.STRING);
// parameterType.setName("String");
// inputParameters.add(parameter);
//
// // Creating output parameters
// OutputParameterType outputParameter = OutputParameterType.Factory.newInstance();
// outputParameter.setParameterName("echo_output");
// outputParameter.setParameterDescription("Echo output");
// ParameterType outputParaType = outputParameter.addNewParameterType();
// outputParaType.setType(DataType.STRING);
// outputParaType.setName("String");
// outputParameters.add(outputParameter);
//
// // Setting input and output parameters to serviceDescriptor
// serviceDescription.getType().setInputParametersArray(inputParameters.toArray(new InputParameterType[]{}));
// serviceDescription.getType().setOutputParametersArray(outputParameters.toArray(new OutputParameterType[]{}));
//
// try {
// airavataAPI.getApplicationManager().saveServiceDescription(serviceDescription);
// } catch (AiravataAPIInvocationException e) {
// e.printStackTrace(); // To change body of catch statement use File |
// // Settings | File Templates.
// }
// // Localhost
// ApplicationDescription applicationDeploymentDescription = new ApplicationDescription();
// ApplicationDeploymentDescriptionType applicationDeploymentDescriptionType = applicationDeploymentDescription.getType();
// applicationDeploymentDescriptionType.addNewApplicationName().setStringValue(serviceName);
// applicationDeploymentDescriptionType.setExecutableLocation("/bin/echo");
// applicationDeploymentDescriptionType.setScratchWorkingDirectory("/tmp");
//
// try {
// airavataAPI.getApplicationManager().saveApplicationDescription(serviceName, "localhost", applicationDeploymentDescription);
// } catch (AiravataAPIInvocationException e) {
// e.printStackTrace(); // To change body of catch statement use File |
// // Settings | File Templates.
// }
// // Stampede
// /*
// * Application descriptor creation and saving
// */
// ApplicationDescription appDesc1 = new ApplicationDescription(HpcApplicationDeploymentType.type);
// HpcApplicationDeploymentType app1 = (HpcApplicationDeploymentType) appDesc1.getType();
// ApplicationDeploymentDescriptionType.ApplicationName name = ApplicationDeploymentDescriptionType.ApplicationName.Factory.newInstance();
// name.setStringValue(serviceName);
// app1.setApplicationName(name);
// ProjectAccountType projectAccountType = app1.addNewProjectAccount();
// projectAccountType.setProjectAccountNumber("TG-STA110014S");
//
// QueueType queueType = app1.addNewQueue();
// queueType.setQueueName("normal");
//
// app1.setCpuCount(1);
// app1.setJobType(JobTypeType.SERIAL);
// app1.setNodeCount(1);
// app1.setProcessorsPerNode(1);
// app1.setMaxWallTime(10);
// /*
// * Use bat file if it is compiled on Windows
// */
// app1.setExecutableLocation("/bin/echo");
//
// /*
// * Default tmp location
// */
// String tempDir = "/home1/01437/ogce";
//
// app1.setScratchWorkingDirectory(tempDir);
// app1.setInstalledParentPath("/usr/bin/");
//
// try {
// airavataAPI.getApplicationManager().saveApplicationDescription(serviceName, stampedeHostAddress, appDesc1);
// } catch (AiravataAPIInvocationException e) {
// e.printStackTrace(); // To change body of catch statement use File |
// // Settings | File Templates.
// }
// // Trestles
// /*
// * Application descriptor creation and saving
// */
// ApplicationDescription appDesc2 = new ApplicationDescription(HpcApplicationDeploymentType.type);
// HpcApplicationDeploymentType app2 = (HpcApplicationDeploymentType) appDesc2.getType();
// ApplicationDeploymentDescriptionType.ApplicationName name2 = ApplicationDeploymentDescriptionType.ApplicationName.Factory.newInstance();
// name2.setStringValue(serviceName);
// app2.setApplicationName(name);
// ProjectAccountType projectAccountType2 = app2.addNewProjectAccount();
// projectAccountType2.setProjectAccountNumber("sds128");
//
// QueueType queueType2 = app2.addNewQueue();
// queueType2.setQueueName("normal");
//
// app2.setCpuCount(1);
// app2.setJobType(JobTypeType.SERIAL);
// app2.setNodeCount(1);
// app2.setProcessorsPerNode(1);
// app2.setMaxWallTime(10);
// /*
// * Use bat file if it is compiled on Windows
// */
// app2.setExecutableLocation("/bin/echo");
//
// /*
// * Default tmp location
// */
// String tempDir2 = "/home/ogce/scratch";
//
// app2.setScratchWorkingDirectory(tempDir2);
// app2.setInstalledParentPath("/opt/torque/bin/");
//
// try {
// airavataAPI.getApplicationManager().saveApplicationDescription(serviceName, trestleshpcHostAddress, appDesc2);
// } catch (AiravataAPIInvocationException e) {
// e.printStackTrace(); // To change body of catch statement use File |
// // Settings | File Templates.
// }
// // Lonestar
// /*
// * Application descriptor creation and saving
// */
// ApplicationDescription appDesc3 = new ApplicationDescription(HpcApplicationDeploymentType.type);
// HpcApplicationDeploymentType app3 = (HpcApplicationDeploymentType) appDesc3.getType();
// ApplicationDeploymentDescriptionType.ApplicationName name3 = ApplicationDeploymentDescriptionType.ApplicationName.Factory.newInstance();
// name3.setStringValue(serviceName);
// app3.setApplicationName(name);
// ProjectAccountType projectAccountType3 = app3.addNewProjectAccount();
// projectAccountType3.setProjectAccountNumber("TG-STA110014S");
//
// QueueType queueType3 = app3.addNewQueue();
// queueType3.setQueueName("normal");
//
// app3.setCpuCount(1);
// app3.setJobType(JobTypeType.SERIAL);
// app3.setNodeCount(1);
// app3.setProcessorsPerNode(1);
// app3.setMaxWallTime(10);
// /*
// * Use bat file if it is compiled on Windows
// */
// app3.setExecutableLocation("/bin/echo");
//
// /*
// * Default tmp location
// */
// String tempDir3 = "/home1/01437/ogce";
//
// app3.setScratchWorkingDirectory(tempDir3);
// app3.setInstalledParentPath("/opt/sge6.2/bin/lx24-amd64/");
//
// try {
// airavataAPI.getApplicationManager().saveApplicationDescription(serviceName, lonestarHostAddress, appDesc3);
// } catch (AiravataAPIInvocationException e) {
// e.printStackTrace(); // To change body of catch statement use File |
// // Settings | File Templates.
// }
//
// }
//
// public void createBigRedDocs() {
// /*
// * Host
// */
// HostDescription host = new HostDescription(SSHHostType.type);
// host.getType().setHostAddress(bigRed2HostAddress);
// host.getType().setHostName("bigred2");
// ((SSHHostType) host.getType()).setHpcResource(true);
// try {
// airavataAPI.getApplicationManager().saveHostDescription(host);
// } catch (AiravataAPIInvocationException e) {
// e.printStackTrace(); //To change body of catch statement use File | Settings | File Templates.
// }
// /*
// * App
// */
// ApplicationDescription appDesc = new ApplicationDescription(HpcApplicationDeploymentType.type);
// HpcApplicationDeploymentType app = (HpcApplicationDeploymentType) appDesc.getType();
// ApplicationDeploymentDescriptionType.ApplicationName name = ApplicationDeploymentDescriptionType.ApplicationName.Factory.newInstance();
// name.setStringValue("EchoLocal");
// app.setApplicationName(name);
//
// app.setCpuCount(1);
// app.setJobType(JobTypeType.SERIAL);
// app.setNodeCount(1);
// app.setProcessorsPerNode(1);
//
// /*
// * Use bat file if it is compiled on Windows
// */
// app.setExecutableLocation("/bin/echo");
//
// /*
// * Default tmp location
// */
// String tempDir = "/tmp";
// String date = (new Date()).toString();
// date = date.replaceAll(" ", "_");
// date = date.replaceAll(":", "_");
//
// tempDir = tempDir + File.separator
// + "SimpleEcho" + "_" + date + "_" + UUID.randomUUID();
//
// System.out.println(tempDir);
// app.setScratchWorkingDirectory(tempDir);
// app.setStaticWorkingDirectory(tempDir);
// app.setInputDataDirectory(tempDir + File.separator + "inputData");
// app.setOutputDataDirectory(tempDir + File.separator + "outputData");
// app.setStandardOutput(tempDir + File.separator + app.getApplicationName().getStringValue() + ".stdout");
// app.setStandardError(tempDir + File.separator + app.getApplicationName().getStringValue() + ".stderr");
// app.setMaxWallTime(5);
// app.setJobSubmitterCommand("aprun -n 1");
// app.setInstalledParentPath("/opt/torque/torque-4.2.3.1/bin/");
//
// /*
// * Service
// */
// ServiceDescription serv = new ServiceDescription();
// serv.getType().setName("SimpleEchoBR");
//
// List inputList = new ArrayList();
//
// InputParameterType input = InputParameterType.Factory.newInstance();
// input.setParameterName("echo_input");
// input.setParameterType(StringParameterType.Factory.newInstance());
// inputList.add(input);
//
// InputParameterType[] inputParamList = inputList.toArray(new InputParameterType[inputList
//
// .size()]);
// List outputList = new ArrayList();
// OutputParameterType output = OutputParameterType.Factory.newInstance();
// output.setParameterName("echo_output");
// output.setParameterType(StringParameterType.Factory.newInstance());
// outputList.add(output);
//
// OutputParameterType[] outputParamList = outputList
// .toArray(new OutputParameterType[outputList.size()]);
//
// serv.getType().setInputParametersArray(inputParamList);
// serv.getType().setOutputParametersArray(outputParamList);
// try {
// airavataAPI.getApplicationManager().saveServiceDescription(serv);
// } catch (AiravataAPIInvocationException e) {
// e.printStackTrace(); // To change body of catch statement use File |
// // Settings | File Templates.
// }
// try {
// airavataAPI.getApplicationManager().saveApplicationDescription("SimpleEchoBR", trestleshpcHostAddress, appDesc);
// } catch (AiravataAPIInvocationException e) {
// e.printStackTrace(); // To change body of catch statement use File |
// // Settings | File Templates.
// }
// }
//
// public AiravataAPI getAiravataAPI() {
// return airavataAPI;
// }
//
// public void setAiravataAPI(AiravataAPI airavataAPI) {
// this.airavataAPI = airavataAPI;
// }
//}
//
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