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The Apache Commons RNG Sampling module provides samplers for various distributions.

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package org.apache.commons.rng.sampling.distribution;

import org.apache.commons.rng.UniformRandomProvider;

/**
 * Sampler for the Poisson
 * distribution.
 *
 * 
    *
  • * Kemp, A, W, (1981) Efficient Generation of Logarithmically Distributed * Pseudo-Random Variables. Journal of the Royal Statistical Society. Vol. 30, No. 3, pp. * 249-253. *
  • *
* *

This sampler is suitable for {@code mean < 40}. For large means, * {@link LargeMeanPoissonSampler} should be used instead.

* *

Note: The algorithm uses a recurrence relation to compute the Poisson probability * and a rolling summation for the cumulative probability. When the mean is large the * initial probability (Math.exp(-mean)) is zero and an exception is raised by the * constructor.

* *

Sampling uses 1 call to {@link UniformRandomProvider#nextDouble()}. This method provides * an alternative to the {@link SmallMeanPoissonSampler} for slow generators of {@code double}.

* * @see Kemp, A.W. (1981) JRSS Vol. 30, pp. * 249-253 * @since 1.3 */ public final class KempSmallMeanPoissonSampler implements SharedStateDiscreteSampler { /** Underlying source of randomness. */ private final UniformRandomProvider rng; /** * Pre-compute {@code Math.exp(-mean)}. * Note: This is the probability of the Poisson sample {@code p(x=0)}. */ private final double p0; /** * The mean of the Poisson sample. */ private final double mean; /** * @param rng Generator of uniformly distributed random numbers. * @param p0 Probability of the Poisson sample {@code p(x=0)}. * @param mean Mean. */ private KempSmallMeanPoissonSampler(UniformRandomProvider rng, double p0, double mean) { this.rng = rng; this.p0 = p0; this.mean = mean; } /** {@inheritDoc} */ @Override public int sample() { // Note on the algorithm: // - X is the unknown sample deviate (the output of the algorithm) // - x is the current value from the distribution // - p is the probability of the current value x, p(X=x) // - u is effectively the cumulative probability that the sample X // is equal or above the current value x, p(X>=x) // So if p(X>=x) > p(X=x) the sample must be above x, otherwise it is x double u = rng.nextDouble(); int x = 0; double p = p0; while (u > p) { u -= p; // Compute the next probability using a recurrence relation. // p(x+1) = p(x) * mean / (x+1) p *= mean / ++x; // The algorithm listed in Kemp (1981) does not check that the rolling probability // is positive. This check is added to ensure no errors when the limit of the summation // 1 - sum(p(x)) is above 0 due to cumulative error in floating point arithmetic. if (p == 0) { return x; } } return x; } /** {@inheritDoc} */ @Override public String toString() { return "Kemp Small Mean Poisson deviate [" + rng.toString() + "]"; } /** {@inheritDoc} */ @Override public SharedStateDiscreteSampler withUniformRandomProvider(UniformRandomProvider rng) { return new KempSmallMeanPoissonSampler(rng, p0, mean); } /** * Creates a new sampler for the Poisson distribution. * * @param rng Generator of uniformly distributed random numbers. * @param mean Mean of the distribution. * @return the sampler * @throws IllegalArgumentException if {@code mean <= 0} or * {@code Math.exp(-mean) == 0}. */ public static SharedStateDiscreteSampler of(UniformRandomProvider rng, double mean) { if (mean <= 0) { throw new IllegalArgumentException("Mean is not strictly positive: " + mean); } final double p0 = Math.exp(-mean); // Probability must be positive. As mean increases then p(0) decreases. if (p0 > 0) { return new KempSmallMeanPoissonSampler(rng, p0, mean); } // This catches the edge case of a NaN mean throw new IllegalArgumentException("No probability for mean: " + mean); } }




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