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The Apache Commons RNG Sampling module provides samplers
for various distributions.
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/*
* Licensed to the Apache Software Foundation (ASF) under one or more
* contributor license agreements. See the NOTICE file distributed with
* this work for additional information regarding copyright ownership.
* The ASF licenses this file to You under the Apache License, Version 2.0
* (the "License"); you may not use this file except in compliance with
* the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.apache.commons.rng.sampling.distribution;
import org.apache.commons.rng.UniformRandomProvider;
/**
* Sampler for the Poisson
* distribution.
*
*
* -
* Kemp, A, W, (1981) Efficient Generation of Logarithmically Distributed
* Pseudo-Random Variables. Journal of the Royal Statistical Society. Vol. 30, No. 3, pp.
* 249-253.
*
*
*
* This sampler is suitable for {@code mean < 40}. For large means,
* {@link LargeMeanPoissonSampler} should be used instead.
*
* Note: The algorithm uses a recurrence relation to compute the Poisson probability
* and a rolling summation for the cumulative probability. When the mean is large the
* initial probability (Math.exp(-mean)) is zero and an exception is raised by the
* constructor.
*
* Sampling uses 1 call to {@link UniformRandomProvider#nextDouble()}. This method provides
* an alternative to the {@link SmallMeanPoissonSampler} for slow generators of {@code double}.
*
* @see Kemp, A.W. (1981) JRSS Vol. 30, pp.
* 249-253
* @since 1.3
*/
public final class KempSmallMeanPoissonSampler
implements SharedStateDiscreteSampler {
/** Underlying source of randomness. */
private final UniformRandomProvider rng;
/**
* Pre-compute {@code Math.exp(-mean)}.
* Note: This is the probability of the Poisson sample {@code p(x=0)}.
*/
private final double p0;
/**
* The mean of the Poisson sample.
*/
private final double mean;
/**
* @param rng Generator of uniformly distributed random numbers.
* @param p0 Probability of the Poisson sample {@code p(x=0)}.
* @param mean Mean.
*/
private KempSmallMeanPoissonSampler(UniformRandomProvider rng,
double p0,
double mean) {
this.rng = rng;
this.p0 = p0;
this.mean = mean;
}
/** {@inheritDoc} */
@Override
public int sample() {
// Note on the algorithm:
// - X is the unknown sample deviate (the output of the algorithm)
// - x is the current value from the distribution
// - p is the probability of the current value x, p(X=x)
// - u is effectively the cumulative probability that the sample X
// is equal or above the current value x, p(X>=x)
// So if p(X>=x) > p(X=x) the sample must be above x, otherwise it is x
double u = rng.nextDouble();
int x = 0;
double p = p0;
while (u > p) {
u -= p;
// Compute the next probability using a recurrence relation.
// p(x+1) = p(x) * mean / (x+1)
p *= mean / ++x;
// The algorithm listed in Kemp (1981) does not check that the rolling probability
// is positive. This check is added to ensure no errors when the limit of the summation
// 1 - sum(p(x)) is above 0 due to cumulative error in floating point arithmetic.
if (p == 0) {
return x;
}
}
return x;
}
/** {@inheritDoc} */
@Override
public String toString() {
return "Kemp Small Mean Poisson deviate [" + rng.toString() + "]";
}
/** {@inheritDoc} */
@Override
public SharedStateDiscreteSampler withUniformRandomProvider(UniformRandomProvider rng) {
return new KempSmallMeanPoissonSampler(rng, p0, mean);
}
/**
* Creates a new sampler for the Poisson distribution.
*
* @param rng Generator of uniformly distributed random numbers.
* @param mean Mean of the distribution.
* @return the sampler
* @throws IllegalArgumentException if {@code mean <= 0} or
* {@code Math.exp(-mean) == 0}.
*/
public static SharedStateDiscreteSampler of(UniformRandomProvider rng,
double mean) {
InternalUtils.requireStrictlyPositive(mean, "mean");
final double p0 = Math.exp(-mean);
// Probability must be positive. As mean increases then p(0) decreases.
if (p0 > 0) {
return new KempSmallMeanPoissonSampler(rng, p0, mean);
}
// This catches the edge case of a NaN mean
throw new IllegalArgumentException("No probability for mean: " + mean);
}
}