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Common functionality for HBase
/*
* Licensed to the Apache Software Foundation (ASF) under one or more
* contributor license agreements. See the NOTICE file distributed with this
* work for additional information regarding copyright ownership. The ASF
* licenses this file to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS, WITHOUT
* WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the
* License for the specific language governing permissions and limitations
* under the License.
*/
package org.apache.hadoop.hbase.io.encoding;
import java.io.DataInputStream;
import java.io.DataOutputStream;
import java.io.IOException;
import java.nio.ByteBuffer;
import org.apache.hadoop.hbase.Cell;
import org.apache.hadoop.hbase.CellUtil;
import org.apache.hadoop.hbase.KeyValue;
import org.apache.hadoop.hbase.KeyValue.KVComparator;
import org.apache.hadoop.hbase.KeyValueUtil;
import org.apache.hadoop.hbase.classification.InterfaceAudience;
import org.apache.hadoop.hbase.util.ByteBufferUtils;
import org.apache.hadoop.hbase.util.Bytes;
/**
* Encoder similar to {@link DiffKeyDeltaEncoder} but supposedly faster.
*
* Compress using:
* - store size of common prefix
* - save column family once in the first KeyValue
* - use integer compression for key, value and prefix (7-bit encoding)
* - use bits to avoid duplication key length, value length
* and type if it same as previous
* - store in 3 bits length of prefix timestamp
* with previous KeyValue's timestamp
* - one bit which allow to omit value if it is the same
*
* Format:
* - 1 byte: flag
* - 1-5 bytes: key length (only if FLAG_SAME_KEY_LENGTH is not set in flag)
* - 1-5 bytes: value length (only if FLAG_SAME_VALUE_LENGTH is not set in flag)
* - 1-5 bytes: prefix length
* - ... bytes: rest of the row (if prefix length is small enough)
* - ... bytes: qualifier (or suffix depending on prefix length)
* - 1-8 bytes: timestamp suffix
* - 1 byte: type (only if FLAG_SAME_TYPE is not set in the flag)
* - ... bytes: value (only if FLAG_SAME_VALUE is not set in the flag)
*
*/
@InterfaceAudience.Private
public class FastDiffDeltaEncoder extends BufferedDataBlockEncoder {
final int MASK_TIMESTAMP_LENGTH = (1 << 0) | (1 << 1) | (1 << 2);
final int SHIFT_TIMESTAMP_LENGTH = 0;
final int FLAG_SAME_KEY_LENGTH = 1 << 3;
final int FLAG_SAME_VALUE_LENGTH = 1 << 4;
final int FLAG_SAME_TYPE = 1 << 5;
final int FLAG_SAME_VALUE = 1 << 6;
private static class FastDiffCompressionState extends CompressionState {
byte[] timestamp = new byte[KeyValue.TIMESTAMP_SIZE];
int prevTimestampOffset;
@Override
protected void readTimestamp(ByteBuffer in) {
in.get(timestamp);
}
@Override
void copyFrom(CompressionState state) {
super.copyFrom(state);
FastDiffCompressionState state2 = (FastDiffCompressionState) state;
System.arraycopy(state2.timestamp, 0, timestamp, 0,
KeyValue.TIMESTAMP_SIZE);
prevTimestampOffset = state2.prevTimestampOffset;
}
/**
* Copies the first key/value from the given stream, and initializes
* decompression state based on it. Assumes that we have already read key
* and value lengths. Does not set {@link #qualifierLength} (not used by
* decompression) or {@link #prevOffset} (set by the calle afterwards).
*/
private void decompressFirstKV(ByteBuffer out, DataInputStream in)
throws IOException {
int kvPos = out.position();
out.putInt(keyLength);
out.putInt(valueLength);
prevTimestampOffset = out.position() + keyLength -
KeyValue.TIMESTAMP_TYPE_SIZE;
ByteBufferUtils.copyFromStreamToBuffer(out, in, keyLength + valueLength);
rowLength = out.getShort(kvPos + KeyValue.ROW_OFFSET);
familyLength = out.get(kvPos + KeyValue.ROW_OFFSET +
KeyValue.ROW_LENGTH_SIZE + rowLength);
type = out.get(prevTimestampOffset + KeyValue.TIMESTAMP_SIZE);
}
}
private int findCommonTimestampPrefix(byte[] curTsBuf, byte[] prevTsBuf) {
int commonPrefix = 0;
while (commonPrefix < (KeyValue.TIMESTAMP_SIZE - 1)
&& curTsBuf[commonPrefix] == prevTsBuf[commonPrefix]) {
commonPrefix++;
}
return commonPrefix; // has to be at most 7 bytes
}
private void uncompressSingleKeyValue(DataInputStream source,
ByteBuffer out, FastDiffCompressionState state)
throws IOException, EncoderBufferTooSmallException {
byte flag = source.readByte();
int prevKeyLength = state.keyLength;
if ((flag & FLAG_SAME_KEY_LENGTH) == 0) {
state.keyLength = ByteBufferUtils.readCompressedInt(source);
}
if ((flag & FLAG_SAME_VALUE_LENGTH) == 0) {
state.valueLength = ByteBufferUtils.readCompressedInt(source);
}
int commonLength = ByteBufferUtils.readCompressedInt(source);
ensureSpace(out, state.keyLength + state.valueLength + KeyValue.ROW_OFFSET);
int kvPos = out.position();
if (!state.isFirst()) {
// copy the prefix
int common;
int prevOffset;
if ((flag & FLAG_SAME_VALUE_LENGTH) == 0) {
out.putInt(state.keyLength);
out.putInt(state.valueLength);
prevOffset = state.prevOffset + KeyValue.ROW_OFFSET;
common = commonLength;
} else {
if ((flag & FLAG_SAME_KEY_LENGTH) != 0) {
prevOffset = state.prevOffset;
common = commonLength + KeyValue.ROW_OFFSET;
} else {
out.putInt(state.keyLength);
prevOffset = state.prevOffset + KeyValue.KEY_LENGTH_SIZE;
common = commonLength + KeyValue.KEY_LENGTH_SIZE;
}
}
ByteBufferUtils.copyFromBufferToBuffer(out, out, prevOffset, common);
// copy the rest of the key from the buffer
int keyRestLength;
if (commonLength < state.rowLength + KeyValue.ROW_LENGTH_SIZE) {
// omit the family part of the key, it is always the same
int rowWithSizeLength;
int rowRestLength;
// check length of row
if (commonLength < KeyValue.ROW_LENGTH_SIZE) {
// not yet copied, do it now
ByteBufferUtils.copyFromStreamToBuffer(out, source,
KeyValue.ROW_LENGTH_SIZE - commonLength);
rowWithSizeLength = out.getShort(out.position() -
KeyValue.ROW_LENGTH_SIZE) + KeyValue.ROW_LENGTH_SIZE;
rowRestLength = rowWithSizeLength - KeyValue.ROW_LENGTH_SIZE;
} else {
// already in kvBuffer, just read it
rowWithSizeLength = out.getShort(kvPos + KeyValue.ROW_OFFSET) +
KeyValue.ROW_LENGTH_SIZE;
rowRestLength = rowWithSizeLength - commonLength;
}
// copy the rest of row
ByteBufferUtils.copyFromStreamToBuffer(out, source, rowRestLength);
// copy the column family
ByteBufferUtils.copyFromBufferToBuffer(out, out,
state.prevOffset + KeyValue.ROW_OFFSET + KeyValue.ROW_LENGTH_SIZE
+ state.rowLength, state.familyLength
+ KeyValue.FAMILY_LENGTH_SIZE);
state.rowLength = (short) (rowWithSizeLength -
KeyValue.ROW_LENGTH_SIZE);
keyRestLength = state.keyLength - rowWithSizeLength -
state.familyLength -
(KeyValue.FAMILY_LENGTH_SIZE + KeyValue.TIMESTAMP_TYPE_SIZE);
} else {
// prevRowWithSizeLength is the same as on previous row
keyRestLength = state.keyLength - commonLength -
KeyValue.TIMESTAMP_TYPE_SIZE;
}
// copy the rest of the key, after column family == column qualifier
ByteBufferUtils.copyFromStreamToBuffer(out, source, keyRestLength);
// copy timestamp
int prefixTimestamp =
(flag & MASK_TIMESTAMP_LENGTH) >>> SHIFT_TIMESTAMP_LENGTH;
ByteBufferUtils.copyFromBufferToBuffer(out, out,
state.prevTimestampOffset, prefixTimestamp);
state.prevTimestampOffset = out.position() - prefixTimestamp;
ByteBufferUtils.copyFromStreamToBuffer(out, source,
KeyValue.TIMESTAMP_SIZE - prefixTimestamp);
// copy the type and value
if ((flag & FLAG_SAME_TYPE) != 0) {
out.put(state.type);
if ((flag & FLAG_SAME_VALUE) != 0) {
ByteBufferUtils.copyFromBufferToBuffer(out, out, state.prevOffset +
KeyValue.ROW_OFFSET + prevKeyLength, state.valueLength);
} else {
ByteBufferUtils.copyFromStreamToBuffer(out, source,
state.valueLength);
}
} else {
if ((flag & FLAG_SAME_VALUE) != 0) {
ByteBufferUtils.copyFromStreamToBuffer(out, source,
KeyValue.TYPE_SIZE);
ByteBufferUtils.copyFromBufferToBuffer(out, out, state.prevOffset +
KeyValue.ROW_OFFSET + prevKeyLength, state.valueLength);
} else {
ByteBufferUtils.copyFromStreamToBuffer(out, source,
state.valueLength + KeyValue.TYPE_SIZE);
}
state.type = out.get(state.prevTimestampOffset +
KeyValue.TIMESTAMP_SIZE);
}
} else { // this is the first element
state.decompressFirstKV(out, source);
}
state.prevOffset = kvPos;
}
@Override
public int internalEncode(Cell cell, HFileBlockDefaultEncodingContext encodingContext,
DataOutputStream out) throws IOException {
EncodingState state = encodingContext.getEncodingState();
int size = compressSingleKeyValue(out, cell, state.prevCell);
size += afterEncodingKeyValue(cell, out, encodingContext);
state.prevCell = cell;
return size;
}
private int compressSingleKeyValue(DataOutputStream out, Cell cell, Cell prevCell)
throws IOException {
int flag = 0; // Do not use more bits than will fit into a byte
int kLength = KeyValueUtil.keyLength(cell);
int vLength = cell.getValueLength();
if (prevCell == null) {
// copy the key, there is no common prefix with none
out.write(flag);
ByteBufferUtils.putCompressedInt(out, kLength);
ByteBufferUtils.putCompressedInt(out, vLength);
ByteBufferUtils.putCompressedInt(out, 0);
CellUtil.writeFlatKey(cell, out);
// Write the value part
out.write(cell.getValueArray(), cell.getValueOffset(), cell.getValueLength());
} else {
int preKeyLength = KeyValueUtil.keyLength(prevCell);
int preValLength = prevCell.getValueLength();
// find a common prefix and skip it
int commonPrefix = CellUtil.findCommonPrefixInFlatKey(cell, prevCell, true, false);
if (kLength == preKeyLength) {
flag |= FLAG_SAME_KEY_LENGTH;
}
if (vLength == prevCell.getValueLength()) {
flag |= FLAG_SAME_VALUE_LENGTH;
}
if (cell.getTypeByte() == prevCell.getTypeByte()) {
flag |= FLAG_SAME_TYPE;
}
byte[] curTsBuf = Bytes.toBytes(cell.getTimestamp());
int commonTimestampPrefix = findCommonTimestampPrefix(curTsBuf,
Bytes.toBytes(prevCell.getTimestamp()));
flag |= commonTimestampPrefix << SHIFT_TIMESTAMP_LENGTH;
// Check if current and previous values are the same. Compare value
// length first as an optimization.
if (vLength == preValLength
&& Bytes.equals(cell.getValueArray(), cell.getValueOffset(), vLength,
prevCell.getValueArray(), prevCell.getValueOffset(), preValLength)) {
flag |= FLAG_SAME_VALUE;
}
out.write(flag);
if ((flag & FLAG_SAME_KEY_LENGTH) == 0) {
ByteBufferUtils.putCompressedInt(out, kLength);
}
if ((flag & FLAG_SAME_VALUE_LENGTH) == 0) {
ByteBufferUtils.putCompressedInt(out, vLength);
}
ByteBufferUtils.putCompressedInt(out, commonPrefix);
short rLen = cell.getRowLength();
if (commonPrefix < rLen + KeyValue.ROW_LENGTH_SIZE) {
// Previous and current rows are different. Copy the differing part of
// the row, skip the column family, and copy the qualifier.
CellUtil.writeRowKeyExcludingCommon(cell, rLen, commonPrefix, out);
out.write(cell.getQualifierArray(), cell.getQualifierOffset(), cell.getQualifierLength());
} else {
// The common part includes the whole row. As the column family is the
// same across the whole file, it will automatically be included in the
// common prefix, so we need not special-case it here.
// What we write here is the non common part of the qualifier
int commonQualPrefix = commonPrefix - (rLen + KeyValue.ROW_LENGTH_SIZE)
- (cell.getFamilyLength() + KeyValue.FAMILY_LENGTH_SIZE);
out.write(cell.getQualifierArray(), cell.getQualifierOffset() + commonQualPrefix,
cell.getQualifierLength() - commonQualPrefix);
}
// Write non common ts part
out.write(curTsBuf, commonTimestampPrefix, KeyValue.TIMESTAMP_SIZE - commonTimestampPrefix);
// Write the type if it is not the same as before.
if ((flag & FLAG_SAME_TYPE) == 0) {
out.write(cell.getTypeByte());
}
// Write the value if it is not the same as before.
if ((flag & FLAG_SAME_VALUE) == 0) {
out.write(cell.getValueArray(), cell.getValueOffset(), vLength);
}
}
return kLength + vLength + KeyValue.KEYVALUE_INFRASTRUCTURE_SIZE;
}
@Override
protected ByteBuffer internalDecodeKeyValues(DataInputStream source, int allocateHeaderLength,
int skipLastBytes, HFileBlockDefaultDecodingContext decodingCtx) throws IOException {
int decompressedSize = source.readInt();
ByteBuffer buffer = ByteBuffer.allocate(decompressedSize +
allocateHeaderLength);
buffer.position(allocateHeaderLength);
FastDiffCompressionState state = new FastDiffCompressionState();
while (source.available() > skipLastBytes) {
uncompressSingleKeyValue(source, buffer, state);
afterDecodingKeyValue(source, buffer, decodingCtx);
}
if (source.available() != skipLastBytes) {
throw new IllegalStateException("Read too much bytes.");
}
return buffer;
}
@Override
public ByteBuffer getFirstKeyInBlock(ByteBuffer block) {
block.mark();
block.position(Bytes.SIZEOF_INT + Bytes.SIZEOF_BYTE);
int keyLength = ByteBufferUtils.readCompressedInt(block);
ByteBufferUtils.readCompressedInt(block); // valueLength
ByteBufferUtils.readCompressedInt(block); // commonLength
int pos = block.position();
block.reset();
ByteBuffer dup = block.duplicate();
dup.position(pos);
dup.limit(pos + keyLength);
return dup.slice();
}
@Override
public String toString() {
return FastDiffDeltaEncoder.class.getSimpleName();
}
protected static class FastDiffSeekerState extends SeekerState {
private byte[] prevTimestampAndType =
new byte[KeyValue.TIMESTAMP_TYPE_SIZE];
private int rowLengthWithSize;
private int familyLengthWithSize;
public FastDiffSeekerState() {
super();
}
@Override
protected void copyFromNext(SeekerState that) {
super.copyFromNext(that);
FastDiffSeekerState other = (FastDiffSeekerState) that;
System.arraycopy(other.prevTimestampAndType, 0,
prevTimestampAndType, 0,
KeyValue.TIMESTAMP_TYPE_SIZE);
rowLengthWithSize = other.rowLengthWithSize;
familyLengthWithSize = other.familyLengthWithSize;
}
}
@Override
public EncodedSeeker createSeeker(KVComparator comparator,
final HFileBlockDecodingContext decodingCtx) {
return new BufferedEncodedSeeker(comparator, decodingCtx) {
private void decode(boolean isFirst) {
byte flag = currentBuffer.get();
if ((flag & FLAG_SAME_KEY_LENGTH) == 0) {
if (!isFirst) {
System.arraycopy(current.keyBuffer,
current.keyLength - current.prevTimestampAndType.length,
current.prevTimestampAndType, 0,
current.prevTimestampAndType.length);
}
current.keyLength = ByteBufferUtils.readCompressedInt(currentBuffer);
}
if ((flag & FLAG_SAME_VALUE_LENGTH) == 0) {
current.valueLength =
ByteBufferUtils.readCompressedInt(currentBuffer);
}
current.lastCommonPrefix =
ByteBufferUtils.readCompressedInt(currentBuffer);
current.ensureSpaceForKey();
if (isFirst) {
// copy everything
currentBuffer.get(current.keyBuffer, current.lastCommonPrefix,
current.keyLength - current.prevTimestampAndType.length);
current.rowLengthWithSize = Bytes.toShort(current.keyBuffer, 0) +
Bytes.SIZEOF_SHORT;
current.familyLengthWithSize =
current.keyBuffer[current.rowLengthWithSize] + Bytes.SIZEOF_BYTE;
} else if (current.lastCommonPrefix < Bytes.SIZEOF_SHORT) {
// length of row is different, copy everything except family
// copy the row size
int oldRowLengthWithSize = current.rowLengthWithSize;
currentBuffer.get(current.keyBuffer, current.lastCommonPrefix,
Bytes.SIZEOF_SHORT - current.lastCommonPrefix);
current.rowLengthWithSize = Bytes.toShort(current.keyBuffer, 0) +
Bytes.SIZEOF_SHORT;
// move the column family
System.arraycopy(current.keyBuffer, oldRowLengthWithSize,
current.keyBuffer, current.rowLengthWithSize,
current.familyLengthWithSize);
// copy the rest of row
currentBuffer.get(current.keyBuffer, Bytes.SIZEOF_SHORT,
current.rowLengthWithSize - Bytes.SIZEOF_SHORT);
// copy the qualifier
currentBuffer.get(current.keyBuffer, current.rowLengthWithSize
+ current.familyLengthWithSize, current.keyLength
- current.rowLengthWithSize - current.familyLengthWithSize
- current.prevTimestampAndType.length);
} else if (current.lastCommonPrefix < current.rowLengthWithSize) {
// We have to copy part of row and qualifier, but the column family
// is in the right place.
// before column family (rest of row)
currentBuffer.get(current.keyBuffer, current.lastCommonPrefix,
current.rowLengthWithSize - current.lastCommonPrefix);
// after column family (qualifier)
currentBuffer.get(current.keyBuffer, current.rowLengthWithSize
+ current.familyLengthWithSize, current.keyLength
- current.rowLengthWithSize - current.familyLengthWithSize
- current.prevTimestampAndType.length);
} else {
// copy just the ending
currentBuffer.get(current.keyBuffer, current.lastCommonPrefix,
current.keyLength - current.prevTimestampAndType.length
- current.lastCommonPrefix);
}
// timestamp
int pos = current.keyLength - current.prevTimestampAndType.length;
int commonTimestampPrefix = (flag & MASK_TIMESTAMP_LENGTH) >>>
SHIFT_TIMESTAMP_LENGTH;
if ((flag & FLAG_SAME_KEY_LENGTH) == 0) {
System.arraycopy(current.prevTimestampAndType, 0, current.keyBuffer,
pos, commonTimestampPrefix);
}
pos += commonTimestampPrefix;
currentBuffer.get(current.keyBuffer, pos,
Bytes.SIZEOF_LONG - commonTimestampPrefix);
pos += Bytes.SIZEOF_LONG - commonTimestampPrefix;
// type
if ((flag & FLAG_SAME_TYPE) == 0) {
currentBuffer.get(current.keyBuffer, pos, Bytes.SIZEOF_BYTE);
} else if ((flag & FLAG_SAME_KEY_LENGTH) == 0) {
current.keyBuffer[pos] =
current.prevTimestampAndType[Bytes.SIZEOF_LONG];
}
// handle value
if ((flag & FLAG_SAME_VALUE) == 0) {
current.valueOffset = currentBuffer.position();
ByteBufferUtils.skip(currentBuffer, current.valueLength);
}
if (includesTags()) {
decodeTags();
}
if (includesMvcc()) {
current.memstoreTS = ByteBufferUtils.readVLong(currentBuffer);
} else {
current.memstoreTS = 0;
}
current.nextKvOffset = currentBuffer.position();
}
@Override
protected void decodeFirst() {
ByteBufferUtils.skip(currentBuffer, Bytes.SIZEOF_INT);
decode(true);
}
@Override
protected void decodeNext() {
decode(false);
}
@Override
protected FastDiffSeekerState createSeekerState() {
return new FastDiffSeekerState();
}
};
}
}