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/**
*
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
* regarding copyright ownership. The ASF licenses this file
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.apache.hadoop.hbase.wal;
import java.io.EOFException;
import java.io.FileNotFoundException;
import java.io.IOException;
import java.io.InterruptedIOException;
import java.text.ParseException;
import java.util.ArrayList;
import java.util.Collections;
import java.util.HashSet;
import java.util.LinkedList;
import java.util.List;
import java.util.Map;
import java.util.NavigableSet;
import java.util.Set;
import java.util.TreeMap;
import java.util.TreeSet;
import java.util.UUID;
import java.util.concurrent.Callable;
import java.util.concurrent.CompletionService;
import java.util.concurrent.ConcurrentHashMap;
import java.util.concurrent.ExecutionException;
import java.util.concurrent.ExecutorCompletionService;
import java.util.concurrent.Future;
import java.util.concurrent.ThreadFactory;
import java.util.concurrent.ThreadPoolExecutor;
import java.util.concurrent.TimeUnit;
import java.util.concurrent.atomic.AtomicBoolean;
import java.util.concurrent.atomic.AtomicLong;
import java.util.concurrent.atomic.AtomicReference;
import java.util.regex.Matcher;
import java.util.regex.Pattern;
import org.apache.commons.logging.Log;
import org.apache.commons.logging.LogFactory;
import org.apache.hadoop.conf.Configuration;
import org.apache.hadoop.fs.FileAlreadyExistsException;
import org.apache.hadoop.fs.FileStatus;
import org.apache.hadoop.fs.FileSystem;
import org.apache.hadoop.fs.Path;
import org.apache.hadoop.fs.PathFilter;
import org.apache.hadoop.hbase.Cell;
import org.apache.hadoop.hbase.CellScanner;
import org.apache.hadoop.hbase.CellUtil;
import org.apache.hadoop.hbase.CoordinatedStateException;
import org.apache.hadoop.hbase.CoordinatedStateManager;
import org.apache.hadoop.hbase.HBaseConfiguration;
import org.apache.hadoop.hbase.HConstants;
import org.apache.hadoop.hbase.HRegionInfo;
import org.apache.hadoop.hbase.HRegionLocation;
import org.apache.hadoop.hbase.RemoteExceptionHandler;
import org.apache.hadoop.hbase.ServerName;
import org.apache.hadoop.hbase.TableName;
import org.apache.hadoop.hbase.TableNotFoundException;
import org.apache.hadoop.hbase.TableStateManager;
import org.apache.hadoop.hbase.classification.InterfaceAudience;
import org.apache.hadoop.hbase.client.ConnectionUtils;
import org.apache.hadoop.hbase.client.Delete;
import org.apache.hadoop.hbase.client.Durability;
import org.apache.hadoop.hbase.client.HConnection;
import org.apache.hadoop.hbase.client.HConnectionManager;
import org.apache.hadoop.hbase.client.Mutation;
import org.apache.hadoop.hbase.client.Put;
import org.apache.hadoop.hbase.coordination.BaseCoordinatedStateManager;
import org.apache.hadoop.hbase.coordination.ZKSplitLogManagerCoordination;
import org.apache.hadoop.hbase.exceptions.RegionOpeningException;
import org.apache.hadoop.hbase.io.HeapSize;
import org.apache.hadoop.hbase.master.SplitLogManager;
import org.apache.hadoop.hbase.monitoring.MonitoredTask;
import org.apache.hadoop.hbase.monitoring.TaskMonitor;
import org.apache.hadoop.hbase.protobuf.ProtobufUtil;
import org.apache.hadoop.hbase.protobuf.RequestConverter;
import org.apache.hadoop.hbase.protobuf.generated.AdminProtos.AdminService.BlockingInterface;
import org.apache.hadoop.hbase.protobuf.generated.AdminProtos.GetRegionInfoRequest;
import org.apache.hadoop.hbase.protobuf.generated.AdminProtos.GetRegionInfoResponse;
import org.apache.hadoop.hbase.protobuf.generated.AdminProtos.WALEntry;
import org.apache.hadoop.hbase.protobuf.generated.ClientProtos.MutationProto.MutationType;
import org.apache.hadoop.hbase.protobuf.generated.ClusterStatusProtos.RegionStoreSequenceIds;
import org.apache.hadoop.hbase.protobuf.generated.ClusterStatusProtos.StoreSequenceId;
import org.apache.hadoop.hbase.protobuf.generated.HBaseProtos;
import org.apache.hadoop.hbase.protobuf.generated.WALProtos.CompactionDescriptor;
import org.apache.hadoop.hbase.protobuf.generated.ZooKeeperProtos;
import org.apache.hadoop.hbase.protobuf.generated.ZooKeeperProtos.SplitLogTask.RecoveryMode;
import org.apache.hadoop.hbase.regionserver.HRegion;
import org.apache.hadoop.hbase.regionserver.LastSequenceId;
// imports for things that haven't moved from regionserver.wal yet.
import org.apache.hadoop.hbase.regionserver.wal.FSHLog;
import org.apache.hadoop.hbase.regionserver.wal.HLogKey;
import org.apache.hadoop.hbase.regionserver.wal.WALCellCodec;
import org.apache.hadoop.hbase.regionserver.wal.WALEdit;
import org.apache.hadoop.hbase.regionserver.wal.WALEditsReplaySink;
import org.apache.hadoop.hbase.util.Bytes;
import org.apache.hadoop.hbase.util.CancelableProgressable;
import org.apache.hadoop.hbase.util.ClassSize;
import org.apache.hadoop.hbase.util.EnvironmentEdgeManager;
import org.apache.hadoop.hbase.util.FSUtils;
import org.apache.hadoop.hbase.util.Pair;
import org.apache.hadoop.hbase.util.Threads;
import org.apache.hadoop.hbase.wal.WAL.Entry;
import org.apache.hadoop.hbase.wal.WAL.Reader;
import org.apache.hadoop.hbase.wal.WALProvider.Writer;
import org.apache.hadoop.hbase.zookeeper.ZKSplitLog;
import org.apache.hadoop.io.MultipleIOException;
import com.google.common.annotations.VisibleForTesting;
import com.google.common.base.Preconditions;
import com.google.common.collect.Lists;
import com.google.protobuf.ServiceException;
import com.google.protobuf.TextFormat;
/**
* This class is responsible for splitting up a bunch of regionserver commit log
* files that are no longer being written to, into new files, one per region for
* region to replay on startup. Delete the old log files when finished.
*/
@InterfaceAudience.Private
public class WALSplitter {
private static final Log LOG = LogFactory.getLog(WALSplitter.class);
/** By default we retry errors in splitting, rather than skipping. */
public static final boolean SPLIT_SKIP_ERRORS_DEFAULT = false;
// Parameters for split process
protected final Path rootDir;
protected final FileSystem fs;
protected final Configuration conf;
// Major subcomponents of the split process.
// These are separated into inner classes to make testing easier.
PipelineController controller;
OutputSink outputSink;
EntryBuffers entryBuffers;
private Set disablingOrDisabledTables =
new HashSet();
private BaseCoordinatedStateManager csm;
private final WALFactory walFactory;
private MonitoredTask status;
// For checking the latest flushed sequence id
protected final LastSequenceId sequenceIdChecker;
protected boolean distributedLogReplay;
// Map encodedRegionName -> lastFlushedSequenceId
protected Map lastFlushedSequenceIds = new ConcurrentHashMap();
// Map encodedRegionName -> maxSeqIdInStores
protected Map> regionMaxSeqIdInStores =
new ConcurrentHashMap>();
// Failed region server that the wal file being split belongs to
protected String failedServerName = "";
// Number of writer threads
private final int numWriterThreads;
// Min batch size when replay WAL edits
private final int minBatchSize;
// the file being split currently
private FileStatus fileBeingSplit;
@VisibleForTesting
WALSplitter(final WALFactory factory, Configuration conf, Path rootDir,
FileSystem fs, LastSequenceId idChecker,
CoordinatedStateManager csm, RecoveryMode mode) {
this.conf = HBaseConfiguration.create(conf);
String codecClassName = conf
.get(WALCellCodec.WAL_CELL_CODEC_CLASS_KEY, WALCellCodec.class.getName());
this.conf.set(HConstants.RPC_CODEC_CONF_KEY, codecClassName);
this.rootDir = rootDir;
this.fs = fs;
this.sequenceIdChecker = idChecker;
this.csm = (BaseCoordinatedStateManager)csm;
this.walFactory = factory;
this.controller = new PipelineController();
entryBuffers = new EntryBuffers(controller,
this.conf.getInt("hbase.regionserver.hlog.splitlog.buffersize",
128*1024*1024));
// a larger minBatchSize may slow down recovery because replay writer has to wait for
// enough edits before replaying them
this.minBatchSize = this.conf.getInt("hbase.regionserver.wal.logreplay.batch.size", 64);
this.distributedLogReplay = (RecoveryMode.LOG_REPLAY == mode);
this.numWriterThreads = this.conf.getInt("hbase.regionserver.hlog.splitlog.writer.threads", 3);
if (csm != null && this.distributedLogReplay) {
outputSink = new LogReplayOutputSink(controller, entryBuffers, numWriterThreads);
} else {
if (this.distributedLogReplay) {
LOG.info("ZooKeeperWatcher is passed in as NULL so disable distrubitedLogRepaly.");
}
this.distributedLogReplay = false;
outputSink = new LogRecoveredEditsOutputSink(controller, entryBuffers, numWriterThreads);
}
}
/**
* Splits a WAL file into region's recovered-edits directory.
* This is the main entry point for distributed log splitting from SplitLogWorker.
*
* If the log file has N regions then N recovered.edits files will be produced.
*
* @param rootDir
* @param logfile
* @param fs
* @param conf
* @param reporter
* @param idChecker
* @param cp coordination state manager
* @return false if it is interrupted by the progress-able.
* @throws IOException
*/
public static boolean splitLogFile(Path rootDir, FileStatus logfile, FileSystem fs,
Configuration conf, CancelableProgressable reporter, LastSequenceId idChecker,
CoordinatedStateManager cp, RecoveryMode mode, final WALFactory factory) throws IOException {
WALSplitter s = new WALSplitter(factory, conf, rootDir, fs, idChecker, cp, mode);
return s.splitLogFile(logfile, reporter);
}
// A wrapper to split one log folder using the method used by distributed
// log splitting. Used by tools and unit tests. It should be package private.
// It is public only because UpgradeTo96 and TestWALObserver are in different packages,
// which uses this method to do log splitting.
public static List split(Path rootDir, Path logDir, Path oldLogDir,
FileSystem fs, Configuration conf, final WALFactory factory) throws IOException {
final FileStatus[] logfiles = SplitLogManager.getFileList(conf,
Collections.singletonList(logDir), null);
List splits = new ArrayList();
if (logfiles != null && logfiles.length > 0) {
for (FileStatus logfile: logfiles) {
WALSplitter s = new WALSplitter(factory, conf, rootDir, fs, null, null,
RecoveryMode.LOG_SPLITTING);
if (s.splitLogFile(logfile, null)) {
finishSplitLogFile(rootDir, oldLogDir, logfile.getPath(), conf);
if (s.outputSink.splits != null) {
splits.addAll(s.outputSink.splits);
}
}
}
}
if (!fs.delete(logDir, true)) {
throw new IOException("Unable to delete src dir: " + logDir);
}
return splits;
}
/**
* log splitting implementation, splits one log file.
* @param logfile should be an actual log file.
*/
@VisibleForTesting
boolean splitLogFile(FileStatus logfile, CancelableProgressable reporter) throws IOException {
Preconditions.checkState(status == null);
Preconditions.checkArgument(logfile.isFile(),
"passed in file status is for something other than a regular file.");
boolean isCorrupted = false;
boolean skipErrors = conf.getBoolean("hbase.hlog.split.skip.errors",
SPLIT_SKIP_ERRORS_DEFAULT);
int interval = conf.getInt("hbase.splitlog.report.interval.loglines", 1024);
Path logPath = logfile.getPath();
boolean outputSinkStarted = false;
boolean progress_failed = false;
int editsCount = 0;
int editsSkipped = 0;
status =
TaskMonitor.get().createStatus(
"Splitting log file " + logfile.getPath() + "into a temporary staging area.");
Reader in = null;
this.fileBeingSplit = logfile;
try {
long logLength = logfile.getLen();
LOG.info("Splitting wal: " + logPath + ", length=" + logLength);
LOG.info("DistributedLogReplay = " + this.distributedLogReplay);
status.setStatus("Opening log file");
if (reporter != null && !reporter.progress()) {
progress_failed = true;
return false;
}
try {
in = getReader(logfile, skipErrors, reporter);
} catch (CorruptedLogFileException e) {
LOG.warn("Could not get reader, corrupted log file " + logPath, e);
ZKSplitLog.markCorrupted(rootDir, logfile.getPath().getName(), fs);
isCorrupted = true;
}
if (in == null) {
LOG.warn("Nothing to split in log file " + logPath);
return true;
}
if (csm != null) {
try {
TableStateManager tsm = csm.getTableStateManager();
disablingOrDisabledTables = tsm.getTablesInStates(
ZooKeeperProtos.Table.State.DISABLED, ZooKeeperProtos.Table.State.DISABLING);
} catch (CoordinatedStateException e) {
throw new IOException("Can't get disabling/disabled tables", e);
}
}
int numOpenedFilesBeforeReporting = conf.getInt("hbase.splitlog.report.openedfiles", 3);
int numOpenedFilesLastCheck = 0;
outputSink.setReporter(reporter);
outputSink.startWriterThreads();
outputSinkStarted = true;
Entry entry;
Long lastFlushedSequenceId = -1L;
ServerName serverName = DefaultWALProvider.getServerNameFromWALDirectoryName(logPath);
failedServerName = (serverName == null) ? "" : serverName.getServerName();
while ((entry = getNextLogLine(in, logPath, skipErrors)) != null) {
byte[] region = entry.getKey().getEncodedRegionName();
String encodedRegionNameAsStr = Bytes.toString(region);
lastFlushedSequenceId = lastFlushedSequenceIds.get(encodedRegionNameAsStr);
if (lastFlushedSequenceId == null) {
if (this.distributedLogReplay) {
RegionStoreSequenceIds ids =
csm.getSplitLogWorkerCoordination().getRegionFlushedSequenceId(failedServerName,
encodedRegionNameAsStr);
if (ids != null) {
lastFlushedSequenceId = ids.getLastFlushedSequenceId();
if (LOG.isDebugEnabled()) {
LOG.debug("DLR Last flushed sequenceid for " + encodedRegionNameAsStr + ": " +
TextFormat.shortDebugString(ids));
}
}
} else if (sequenceIdChecker != null) {
RegionStoreSequenceIds ids = sequenceIdChecker.getLastSequenceId(region);
Map maxSeqIdInStores = new TreeMap(Bytes.BYTES_COMPARATOR);
for (StoreSequenceId storeSeqId : ids.getStoreSequenceIdList()) {
maxSeqIdInStores.put(storeSeqId.getFamilyName().toByteArray(),
storeSeqId.getSequenceId());
}
regionMaxSeqIdInStores.put(encodedRegionNameAsStr, maxSeqIdInStores);
lastFlushedSequenceId = ids.getLastFlushedSequenceId();
if (LOG.isDebugEnabled()) {
LOG.debug("DLS Last flushed sequenceid for " + encodedRegionNameAsStr + ": " +
TextFormat.shortDebugString(ids));
}
}
if (lastFlushedSequenceId == null) {
lastFlushedSequenceId = -1L;
}
lastFlushedSequenceIds.put(encodedRegionNameAsStr, lastFlushedSequenceId);
}
if (lastFlushedSequenceId >= entry.getKey().getLogSeqNum()) {
editsSkipped++;
continue;
}
// Don't send Compaction/Close/Open region events to recovered edit type sinks.
if (entry.getEdit().isMetaEdit() && !outputSink.keepRegionEvent(entry)) {
editsSkipped++;
continue;
}
entryBuffers.appendEntry(entry);
editsCount++;
int moreWritersFromLastCheck = this.getNumOpenWriters() - numOpenedFilesLastCheck;
// If sufficient edits have passed, check if we should report progress.
if (editsCount % interval == 0
|| moreWritersFromLastCheck > numOpenedFilesBeforeReporting) {
numOpenedFilesLastCheck = this.getNumOpenWriters();
String countsStr = (editsCount - (editsSkipped + outputSink.getSkippedEdits()))
+ " edits, skipped " + editsSkipped + " edits.";
status.setStatus("Split " + countsStr);
if (reporter != null && !reporter.progress()) {
progress_failed = true;
return false;
}
}
}
} catch (InterruptedException ie) {
IOException iie = new InterruptedIOException();
iie.initCause(ie);
throw iie;
} catch (CorruptedLogFileException e) {
LOG.warn("Could not parse, corrupted log file " + logPath, e);
csm.getSplitLogWorkerCoordination().markCorrupted(rootDir,
logfile.getPath().getName(), fs);
isCorrupted = true;
} catch (IOException e) {
e = RemoteExceptionHandler.checkIOException(e);
throw e;
} finally {
LOG.debug("Finishing writing output logs and closing down.");
try {
if (null != in) {
in.close();
}
} catch (IOException exception) {
LOG.warn("Could not close wal reader: " + exception.getMessage());
LOG.debug("exception details", exception);
}
try {
if (outputSinkStarted) {
// Set progress_failed to true as the immediate following statement will reset its value
// when finishWritingAndClose() throws exception, progress_failed has the right value
progress_failed = true;
progress_failed = outputSink.finishWritingAndClose() == null;
}
} finally {
String msg =
"Processed " + editsCount + " edits across " + outputSink.getNumberOfRecoveredRegions()
+ " regions; edits skipped=" + editsSkipped + "; log file=" + logPath +
", length=" + logfile.getLen() + // See if length got updated post lease recovery
", corrupted=" + isCorrupted + ", progress failed=" + progress_failed;
LOG.info(msg);
status.markComplete(msg);
}
}
return !progress_failed;
}
/**
* Completes the work done by splitLogFile by archiving logs
*
* It is invoked by SplitLogManager once it knows that one of the
* SplitLogWorkers have completed the splitLogFile() part. If the master
* crashes then this function might get called multiple times.
*
* @param logfile
* @param conf
* @throws IOException
*/
public static void finishSplitLogFile(String logfile,
Configuration conf) throws IOException {
Path rootdir = FSUtils.getRootDir(conf);
Path oldLogDir = new Path(rootdir, HConstants.HREGION_OLDLOGDIR_NAME);
Path logPath;
if (FSUtils.isStartingWithPath(rootdir, logfile)) {
logPath = new Path(logfile);
} else {
logPath = new Path(rootdir, logfile);
}
finishSplitLogFile(rootdir, oldLogDir, logPath, conf);
}
private static void finishSplitLogFile(Path rootdir, Path oldLogDir,
Path logPath, Configuration conf) throws IOException {
List processedLogs = new ArrayList();
List corruptedLogs = new ArrayList();
FileSystem fs;
fs = rootdir.getFileSystem(conf);
if (ZKSplitLog.isCorrupted(rootdir, logPath.getName(), fs)) {
corruptedLogs.add(logPath);
} else {
processedLogs.add(logPath);
}
archiveLogs(corruptedLogs, processedLogs, oldLogDir, fs, conf);
Path stagingDir = ZKSplitLog.getSplitLogDir(rootdir, logPath.getName());
fs.delete(stagingDir, true);
}
/**
* Moves processed logs to a oldLogDir after successful processing Moves
* corrupted logs (any log that couldn't be successfully parsed to corruptDir
* (.corrupt) for later investigation
*
* @param corruptedLogs
* @param processedLogs
* @param oldLogDir
* @param fs
* @param conf
* @throws IOException
*/
private static void archiveLogs(
final List corruptedLogs,
final List processedLogs, final Path oldLogDir,
final FileSystem fs, final Configuration conf) throws IOException {
final Path corruptDir = new Path(FSUtils.getRootDir(conf), conf.get(
"hbase.regionserver.hlog.splitlog.corrupt.dir", HConstants.CORRUPT_DIR_NAME));
if (!fs.mkdirs(corruptDir)) {
LOG.info("Unable to mkdir " + corruptDir);
}
fs.mkdirs(oldLogDir);
// this method can get restarted or called multiple times for archiving
// the same log files.
for (Path corrupted : corruptedLogs) {
Path p = new Path(corruptDir, corrupted.getName());
if (fs.exists(corrupted)) {
if (!fs.rename(corrupted, p)) {
LOG.warn("Unable to move corrupted log " + corrupted + " to " + p);
} else {
LOG.warn("Moved corrupted log " + corrupted + " to " + p);
}
}
}
for (Path p : processedLogs) {
Path newPath = FSHLog.getWALArchivePath(oldLogDir, p);
if (fs.exists(p)) {
if (!FSUtils.renameAndSetModifyTime(fs, p, newPath)) {
LOG.warn("Unable to move " + p + " to " + newPath);
} else {
LOG.info("Archived processed log " + p + " to " + newPath);
}
}
}
}
/**
* Path to a file under RECOVERED_EDITS_DIR directory of the region found in
* logEntry named for the sequenceid in the passed
* logEntry: e.g. /hbase/some_table/2323432434/recovered.edits/2332.
* This method also ensures existence of RECOVERED_EDITS_DIR under the region
* creating it if necessary.
* @param fs
* @param logEntry
* @param rootDir HBase root dir.
* @param fileBeingSplit the file being split currently. Used to generate tmp file name.
* @return Path to file into which to dump split log edits.
* @throws IOException
*/
@SuppressWarnings("deprecation")
@VisibleForTesting
static Path getRegionSplitEditsPath(final FileSystem fs,
final Entry logEntry, final Path rootDir, String fileBeingSplit)
throws IOException {
Path tableDir = FSUtils.getTableDir(rootDir, logEntry.getKey().getTablename());
String encodedRegionName = Bytes.toString(logEntry.getKey().getEncodedRegionName());
Path regiondir = HRegion.getRegionDir(tableDir, encodedRegionName);
Path dir = getRegionDirRecoveredEditsDir(regiondir);
if (!fs.exists(regiondir)) {
LOG.info("This region's directory doesn't exist: "
+ regiondir.toString() + ". It is very likely that it was" +
" already split so it's safe to discard those edits.");
return null;
}
if (fs.exists(dir) && fs.isFile(dir)) {
Path tmp = new Path("/tmp");
if (!fs.exists(tmp)) {
fs.mkdirs(tmp);
}
tmp = new Path(tmp,
HConstants.RECOVERED_EDITS_DIR + "_" + encodedRegionName);
LOG.warn("Found existing old file: " + dir + ". It could be some "
+ "leftover of an old installation. It should be a folder instead. "
+ "So moving it to " + tmp);
if (!fs.rename(dir, tmp)) {
LOG.warn("Failed to sideline old file " + dir);
}
}
if (!fs.exists(dir) && !fs.mkdirs(dir)) {
LOG.warn("mkdir failed on " + dir);
}
// Append fileBeingSplit to prevent name conflict since we may have duplicate wal entries now.
// Append file name ends with RECOVERED_LOG_TMPFILE_SUFFIX to ensure
// region's replayRecoveredEdits will not delete it
String fileName = formatRecoveredEditsFileName(logEntry.getKey().getLogSeqNum());
fileName = getTmpRecoveredEditsFileName(fileName + "-" + fileBeingSplit);
return new Path(dir, fileName);
}
private static String getTmpRecoveredEditsFileName(String fileName) {
return fileName + RECOVERED_LOG_TMPFILE_SUFFIX;
}
/**
* Get the completed recovered edits file path, renaming it to be by last edit
* in the file from its first edit. Then we could use the name to skip
* recovered edits when doing {@link HRegion#replayRecoveredEditsIfAny}.
* @param srcPath
* @param maximumEditLogSeqNum
* @return dstPath take file's last edit log seq num as the name
*/
private static Path getCompletedRecoveredEditsFilePath(Path srcPath,
long maximumEditLogSeqNum) {
String fileName = formatRecoveredEditsFileName(maximumEditLogSeqNum);
return new Path(srcPath.getParent(), fileName);
}
@VisibleForTesting
static String formatRecoveredEditsFileName(final long seqid) {
return String.format("%019d", seqid);
}
private static final Pattern EDITFILES_NAME_PATTERN = Pattern.compile("-?[0-9]+");
private static final String RECOVERED_LOG_TMPFILE_SUFFIX = ".temp";
/**
* @param regiondir
* This regions directory in the filesystem.
* @return The directory that holds recovered edits files for the region
* regiondir
*/
public static Path getRegionDirRecoveredEditsDir(final Path regiondir) {
return new Path(regiondir, HConstants.RECOVERED_EDITS_DIR);
}
/**
* Returns sorted set of edit files made by splitter, excluding files
* with '.temp' suffix.
*
* @param fs
* @param regiondir
* @return Files in passed regiondir as a sorted set.
* @throws IOException
*/
public static NavigableSet getSplitEditFilesSorted(final FileSystem fs,
final Path regiondir) throws IOException {
NavigableSet filesSorted = new TreeSet();
Path editsdir = getRegionDirRecoveredEditsDir(regiondir);
if (!fs.exists(editsdir))
return filesSorted;
FileStatus[] files = FSUtils.listStatus(fs, editsdir, new PathFilter() {
@Override
public boolean accept(Path p) {
boolean result = false;
try {
// Return files and only files that match the editfile names pattern.
// There can be other files in this directory other than edit files.
// In particular, on error, we'll move aside the bad edit file giving
// it a timestamp suffix. See moveAsideBadEditsFile.
Matcher m = EDITFILES_NAME_PATTERN.matcher(p.getName());
result = fs.isFile(p) && m.matches();
// Skip the file whose name ends with RECOVERED_LOG_TMPFILE_SUFFIX,
// because it means splitwal thread is writting this file.
if (p.getName().endsWith(RECOVERED_LOG_TMPFILE_SUFFIX)) {
result = false;
}
// Skip SeqId Files
if (isSequenceIdFile(p)) {
result = false;
}
} catch (IOException e) {
LOG.warn("Failed isFile check on " + p);
}
return result;
}
});
if (files == null) {
return filesSorted;
}
for (FileStatus status : files) {
filesSorted.add(status.getPath());
}
return filesSorted;
}
/**
* Move aside a bad edits file.
*
* @param fs
* @param edits
* Edits file to move aside.
* @return The name of the moved aside file.
* @throws IOException
*/
public static Path moveAsideBadEditsFile(final FileSystem fs, final Path edits)
throws IOException {
Path moveAsideName = new Path(edits.getParent(), edits.getName() + "."
+ System.currentTimeMillis());
if (!fs.rename(edits, moveAsideName)) {
LOG.warn("Rename failed from " + edits + " to " + moveAsideName);
}
return moveAsideName;
}
private static final String SEQUENCE_ID_FILE_SUFFIX = ".seqid";
private static final String OLD_SEQUENCE_ID_FILE_SUFFIX = "_seqid";
private static final int SEQUENCE_ID_FILE_SUFFIX_LENGTH = SEQUENCE_ID_FILE_SUFFIX.length();
/**
* Is the given file a region open sequence id file.
*/
@VisibleForTesting
public static boolean isSequenceIdFile(final Path file) {
return file.getName().endsWith(SEQUENCE_ID_FILE_SUFFIX)
|| file.getName().endsWith(OLD_SEQUENCE_ID_FILE_SUFFIX);
}
/**
* Create a file with name as region open sequence id
* @param fs
* @param regiondir
* @param newSeqId
* @param saftyBumper
* @return long new sequence Id value
* @throws IOException
*/
public static long writeRegionSequenceIdFile(final FileSystem fs, final Path regiondir,
long newSeqId, long saftyBumper) throws IOException {
Path editsdir = WALSplitter.getRegionDirRecoveredEditsDir(regiondir);
long maxSeqId = 0;
FileStatus[] files = null;
if (fs.exists(editsdir)) {
files = FSUtils.listStatus(fs, editsdir, new PathFilter() {
@Override
public boolean accept(Path p) {
return isSequenceIdFile(p);
}
});
if (files != null) {
for (FileStatus status : files) {
String fileName = status.getPath().getName();
try {
Long tmpSeqId = Long.parseLong(fileName.substring(0, fileName.length()
- SEQUENCE_ID_FILE_SUFFIX_LENGTH));
maxSeqId = Math.max(tmpSeqId, maxSeqId);
} catch (NumberFormatException ex) {
LOG.warn("Invalid SeqId File Name=" + fileName);
}
}
}
}
if (maxSeqId > newSeqId) {
newSeqId = maxSeqId;
}
newSeqId += saftyBumper; // bump up SeqId
// write a new seqId file
Path newSeqIdFile = new Path(editsdir, newSeqId + SEQUENCE_ID_FILE_SUFFIX);
if (newSeqId != maxSeqId) {
try {
if (!fs.createNewFile(newSeqIdFile) && !fs.exists(newSeqIdFile)) {
throw new IOException("Failed to create SeqId file:" + newSeqIdFile);
}
if (LOG.isDebugEnabled()) {
LOG.debug("Wrote region seqId=" + newSeqIdFile + " to file, newSeqId=" + newSeqId
+ ", maxSeqId=" + maxSeqId);
}
} catch (FileAlreadyExistsException ignored) {
// latest hdfs throws this exception. it's all right if newSeqIdFile already exists
}
}
// remove old ones
if (files != null) {
for (FileStatus status : files) {
if (newSeqIdFile.equals(status.getPath())) {
continue;
}
fs.delete(status.getPath(), false);
}
}
return newSeqId;
}
/**
* Create a new {@link Reader} for reading logs to split.
*
* @param file
* @return A new Reader instance, caller should close
* @throws IOException
* @throws CorruptedLogFileException
*/
protected Reader getReader(FileStatus file, boolean skipErrors, CancelableProgressable reporter)
throws IOException, CorruptedLogFileException {
Path path = file.getPath();
long length = file.getLen();
Reader in;
// Check for possibly empty file. With appends, currently Hadoop reports a
// zero length even if the file has been sync'd. Revisit if HDFS-376 or
// HDFS-878 is committed.
if (length <= 0) {
LOG.warn("File " + path + " might be still open, length is 0");
}
try {
FSUtils.getInstance(fs, conf).recoverFileLease(fs, path, conf, reporter);
try {
in = getReader(path, reporter);
} catch (EOFException e) {
if (length <= 0) {
// TODO should we ignore an empty, not-last log file if skip.errors
// is false? Either way, the caller should decide what to do. E.g.
// ignore if this is the last log in sequence.
// TODO is this scenario still possible if the log has been
// recovered (i.e. closed)
LOG.warn("Could not open " + path + " for reading. File is empty", e);
return null;
} else {
// EOFException being ignored
return null;
}
}
} catch (IOException e) {
if (e instanceof FileNotFoundException) {
// A wal file may not exist anymore. Nothing can be recovered so move on
LOG.warn("File " + path + " doesn't exist anymore.", e);
return null;
}
if (!skipErrors || e instanceof InterruptedIOException) {
throw e; // Don't mark the file corrupted if interrupted, or not skipErrors
}
CorruptedLogFileException t =
new CorruptedLogFileException("skipErrors=true Could not open wal " +
path + " ignoring");
t.initCause(e);
throw t;
}
return in;
}
static private Entry getNextLogLine(Reader in, Path path, boolean skipErrors)
throws CorruptedLogFileException, IOException {
try {
return in.next();
} catch (EOFException eof) {
// truncated files are expected if a RS crashes (see HBASE-2643)
LOG.info("EOF from wal " + path + ". continuing");
return null;
} catch (IOException e) {
// If the IOE resulted from bad file format,
// then this problem is idempotent and retrying won't help
if (e.getCause() != null &&
(e.getCause() instanceof ParseException ||
e.getCause() instanceof org.apache.hadoop.fs.ChecksumException)) {
LOG.warn("Parse exception " + e.getCause().toString() + " from wal "
+ path + ". continuing");
return null;
}
if (!skipErrors) {
throw e;
}
CorruptedLogFileException t =
new CorruptedLogFileException("skipErrors=true Ignoring exception" +
" while parsing wal " + path + ". Marking as corrupted");
t.initCause(e);
throw t;
}
}
/**
* Create a new {@link Writer} for writing log splits.
* @return a new Writer instance, caller should close
*/
protected Writer createWriter(Path logfile)
throws IOException {
return walFactory.createRecoveredEditsWriter(fs, logfile);
}
/**
* Create a new {@link Reader} for reading logs to split.
* @return new Reader instance, caller should close
*/
protected Reader getReader(Path curLogFile, CancelableProgressable reporter) throws IOException {
return walFactory.createReader(fs, curLogFile, reporter);
}
/**
* Get current open writers
*/
private int getNumOpenWriters() {
int result = 0;
if (this.outputSink != null) {
result += this.outputSink.getNumOpenWriters();
}
return result;
}
/**
* Contains some methods to control WAL-entries producer / consumer interactions
*/
public static class PipelineController {
// If an exception is thrown by one of the other threads, it will be
// stored here.
AtomicReference thrown = new AtomicReference();
// Wait/notify for when data has been produced by the writer thread,
// consumed by the reader thread, or an exception occurred
public final Object dataAvailable = new Object();
void writerThreadError(Throwable t) {
thrown.compareAndSet(null, t);
}
/**
* Check for errors in the writer threads. If any is found, rethrow it.
*/
void checkForErrors() throws IOException {
Throwable thrown = this.thrown.get();
if (thrown == null) return;
if (thrown instanceof IOException) {
throw new IOException(thrown);
} else {
throw new RuntimeException(thrown);
}
}
}
/**
* Class which accumulates edits and separates them into a buffer per region
* while simultaneously accounting RAM usage. Blocks if the RAM usage crosses
* a predefined threshold.
*
* Writer threads then pull region-specific buffers from this class.
*/
public static class EntryBuffers {
PipelineController controller;
Map buffers =
new TreeMap(Bytes.BYTES_COMPARATOR);
/* Track which regions are currently in the middle of writing. We don't allow
an IO thread to pick up bytes from a region if we're already writing
data for that region in a different IO thread. */
Set currentlyWriting = new TreeSet(Bytes.BYTES_COMPARATOR);
long totalBuffered = 0;
long maxHeapUsage;
public EntryBuffers(PipelineController controller, long maxHeapUsage) {
this.controller = controller;
this.maxHeapUsage = maxHeapUsage;
}
/**
* Append a log entry into the corresponding region buffer.
* Blocks if the total heap usage has crossed the specified threshold.
*
* @throws InterruptedException
* @throws IOException
*/
public void appendEntry(Entry entry) throws InterruptedException, IOException {
WALKey key = entry.getKey();
RegionEntryBuffer buffer;
long incrHeap;
synchronized (this) {
buffer = buffers.get(key.getEncodedRegionName());
if (buffer == null) {
buffer = new RegionEntryBuffer(key.getTablename(), key.getEncodedRegionName());
buffers.put(key.getEncodedRegionName(), buffer);
}
incrHeap= buffer.appendEntry(entry);
}
// If we crossed the chunk threshold, wait for more space to be available
synchronized (controller.dataAvailable) {
totalBuffered += incrHeap;
while (totalBuffered > maxHeapUsage && controller.thrown.get() == null) {
LOG.debug("Used " + totalBuffered + " bytes of buffered edits, waiting for IO threads...");
controller.dataAvailable.wait(2000);
}
controller.dataAvailable.notifyAll();
}
controller.checkForErrors();
}
/**
* @return RegionEntryBuffer a buffer of edits to be written or replayed.
*/
synchronized RegionEntryBuffer getChunkToWrite() {
long biggestSize = 0;
byte[] biggestBufferKey = null;
for (Map.Entry entry : buffers.entrySet()) {
long size = entry.getValue().heapSize();
if (size > biggestSize && (!currentlyWriting.contains(entry.getKey()))) {
biggestSize = size;
biggestBufferKey = entry.getKey();
}
}
if (biggestBufferKey == null) {
return null;
}
RegionEntryBuffer buffer = buffers.remove(biggestBufferKey);
currentlyWriting.add(biggestBufferKey);
return buffer;
}
void doneWriting(RegionEntryBuffer buffer) {
synchronized (this) {
boolean removed = currentlyWriting.remove(buffer.encodedRegionName);
assert removed;
}
long size = buffer.heapSize();
synchronized (controller.dataAvailable) {
totalBuffered -= size;
// We may unblock writers
controller.dataAvailable.notifyAll();
}
}
synchronized boolean isRegionCurrentlyWriting(byte[] region) {
return currentlyWriting.contains(region);
}
public void waitUntilDrained() {
synchronized (controller.dataAvailable) {
while (totalBuffered > 0) {
try {
controller.dataAvailable.wait(2000);
} catch (InterruptedException e) {
LOG.warn("Got interrupted while waiting for EntryBuffers is drained");
Thread.interrupted();
break;
}
}
}
}
}
/**
* A buffer of some number of edits for a given region.
* This accumulates edits and also provides a memory optimization in order to
* share a single byte array instance for the table and region name.
* Also tracks memory usage of the accumulated edits.
*/
public static class RegionEntryBuffer implements HeapSize {
long heapInBuffer = 0;
List entryBuffer;
TableName tableName;
byte[] encodedRegionName;
RegionEntryBuffer(TableName tableName, byte[] region) {
this.tableName = tableName;
this.encodedRegionName = region;
this.entryBuffer = new LinkedList();
}
long appendEntry(Entry entry) {
internify(entry);
entryBuffer.add(entry);
long incrHeap = entry.getEdit().heapSize() +
ClassSize.align(2 * ClassSize.REFERENCE) + // WALKey pointers
0; // TODO linkedlist entry
heapInBuffer += incrHeap;
return incrHeap;
}
private void internify(Entry entry) {
WALKey k = entry.getKey();
k.internTableName(this.tableName);
k.internEncodedRegionName(this.encodedRegionName);
}
@Override
public long heapSize() {
return heapInBuffer;
}
public byte[] getEncodedRegionName() {
return encodedRegionName;
}
public List getEntryBuffer() {
return entryBuffer;
}
public TableName getTableName() {
return tableName;
}
}
public static class WriterThread extends Thread {
private volatile boolean shouldStop = false;
private PipelineController controller;
private EntryBuffers entryBuffers;
private OutputSink outputSink = null;
WriterThread(PipelineController controller, EntryBuffers entryBuffers, OutputSink sink, int i){
super(Thread.currentThread().getName() + "-Writer-" + i);
this.controller = controller;
this.entryBuffers = entryBuffers;
outputSink = sink;
}
@Override
public void run() {
try {
doRun();
} catch (Throwable t) {
LOG.error("Exiting thread", t);
controller.writerThreadError(t);
}
}
private void doRun() throws IOException {
if (LOG.isTraceEnabled()) LOG.trace("Writer thread starting");
while (true) {
RegionEntryBuffer buffer = entryBuffers.getChunkToWrite();
if (buffer == null) {
// No data currently available, wait on some more to show up
synchronized (controller.dataAvailable) {
if (shouldStop && !this.outputSink.flush()) {
return;
}
try {
controller.dataAvailable.wait(500);
} catch (InterruptedException ie) {
if (!shouldStop) {
throw new RuntimeException(ie);
}
}
}
continue;
}
assert buffer != null;
try {
writeBuffer(buffer);
} finally {
entryBuffers.doneWriting(buffer);
}
}
}
private void writeBuffer(RegionEntryBuffer buffer) throws IOException {
outputSink.append(buffer);
}
void finish() {
synchronized (controller.dataAvailable) {
shouldStop = true;
controller.dataAvailable.notifyAll();
}
}
}
/**
* The following class is an abstraction class to provide a common interface to support both
* existing recovered edits file sink and region server WAL edits replay sink
*/
public static abstract class OutputSink {
protected PipelineController controller;
protected EntryBuffers entryBuffers;
protected Map writers = Collections
.synchronizedMap(new TreeMap(Bytes.BYTES_COMPARATOR));;
protected final Map regionMaximumEditLogSeqNum = Collections
.synchronizedMap(new TreeMap(Bytes.BYTES_COMPARATOR));
protected final List writerThreads = Lists.newArrayList();
/* Set of regions which we've decided should not output edits */
protected final Set blacklistedRegions = Collections
.synchronizedSet(new TreeSet(Bytes.BYTES_COMPARATOR));
protected boolean closeAndCleanCompleted = false;
protected boolean writersClosed = false;
protected final int numThreads;
protected CancelableProgressable reporter = null;
protected AtomicLong skippedEdits = new AtomicLong();
protected List splits = null;
public OutputSink(PipelineController controller, EntryBuffers entryBuffers, int numWriters) {
numThreads = numWriters;
this.controller = controller;
this.entryBuffers = entryBuffers;
}
void setReporter(CancelableProgressable reporter) {
this.reporter = reporter;
}
/**
* Start the threads that will pump data from the entryBuffers to the output files.
*/
public synchronized void startWriterThreads() {
for (int i = 0; i < numThreads; i++) {
WriterThread t = new WriterThread(controller, entryBuffers, this, i);
t.start();
writerThreads.add(t);
}
}
/**
*
* Update region's maximum edit log SeqNum.
*/
void updateRegionMaximumEditLogSeqNum(Entry entry) {
synchronized (regionMaximumEditLogSeqNum) {
Long currentMaxSeqNum = regionMaximumEditLogSeqNum.get(entry.getKey()
.getEncodedRegionName());
if (currentMaxSeqNum == null || entry.getKey().getLogSeqNum() > currentMaxSeqNum) {
regionMaximumEditLogSeqNum.put(entry.getKey().getEncodedRegionName(), entry.getKey()
.getLogSeqNum());
}
}
}
Long getRegionMaximumEditLogSeqNum(byte[] region) {
return regionMaximumEditLogSeqNum.get(region);
}
/**
* @return the number of currently opened writers
*/
int getNumOpenWriters() {
return this.writers.size();
}
long getSkippedEdits() {
return this.skippedEdits.get();
}
/**
* Wait for writer threads to dump all info to the sink
* @return true when there is no error
* @throws IOException
*/
protected boolean finishWriting(boolean interrupt) throws IOException {
LOG.debug("Waiting for split writer threads to finish");
boolean progress_failed = false;
for (WriterThread t : writerThreads) {
t.finish();
}
if (interrupt) {
for (WriterThread t : writerThreads) {
t.interrupt(); // interrupt the writer threads. We are stopping now.
}
}
for (WriterThread t : writerThreads) {
if (!progress_failed && reporter != null && !reporter.progress()) {
progress_failed = true;
}
try {
t.join();
} catch (InterruptedException ie) {
IOException iie = new InterruptedIOException();
iie.initCause(ie);
throw iie;
}
}
controller.checkForErrors();
LOG.info(this.writerThreads.size() + " split writers finished; closing...");
return (!progress_failed);
}
public abstract List finishWritingAndClose() throws IOException;
/**
* @return a map from encoded region ID to the number of edits written out for that region.
*/
public abstract Map getOutputCounts();
/**
* @return number of regions we've recovered
*/
public abstract int getNumberOfRecoveredRegions();
/**
* @param buffer A WAL Edit Entry
* @throws IOException
*/
public abstract void append(RegionEntryBuffer buffer) throws IOException;
/**
* WriterThread call this function to help flush internal remaining edits in buffer before close
* @return true when underlying sink has something to flush
*/
public boolean flush() throws IOException {
return false;
}
/**
* Some WALEdit's contain only KV's for account on what happened to a region.
* Not all sinks will want to get all of those edits.
*
* @return Return true if this sink wants to accept this region-level WALEdit.
*/
public abstract boolean keepRegionEvent(Entry entry);
}
/**
* Class that manages the output streams from the log splitting process.
*/
class LogRecoveredEditsOutputSink extends OutputSink {
public LogRecoveredEditsOutputSink(PipelineController controller, EntryBuffers entryBuffers,
int numWriters) {
// More threads could potentially write faster at the expense
// of causing more disk seeks as the logs are split.
// 3. After a certain setting (probably around 3) the
// process will be bound on the reader in the current
// implementation anyway.
super(controller, entryBuffers, numWriters);
}
/**
* @return null if failed to report progress
* @throws IOException
*/
@Override
public List finishWritingAndClose() throws IOException {
boolean isSuccessful = false;
List result = null;
try {
isSuccessful = finishWriting(false);
} finally {
result = close();
List thrown = closeLogWriters(null);
if (thrown != null && !thrown.isEmpty()) {
throw MultipleIOException.createIOException(thrown);
}
}
if (isSuccessful) {
splits = result;
}
return splits;
}
// delete the one with fewer wal entries
private void deleteOneWithFewerEntries(WriterAndPath wap, Path dst) throws IOException {
long dstMinLogSeqNum = -1L;
try (WAL.Reader reader = walFactory.createReader(fs, dst)) {
WAL.Entry entry = reader.next();
if (entry != null) {
dstMinLogSeqNum = entry.getKey().getLogSeqNum();
}
} catch (EOFException e) {
if (LOG.isDebugEnabled()) {
LOG.debug(
"Got EOF when reading first WAL entry from " + dst + ", an empty or broken WAL file?",
e);
}
}
if (wap.minLogSeqNum < dstMinLogSeqNum) {
LOG.warn("Found existing old edits file. It could be the result of a previous failed"
+ " split attempt or we have duplicated wal entries. Deleting " + dst + ", length="
+ fs.getFileStatus(dst).getLen());
if (!fs.delete(dst, false)) {
LOG.warn("Failed deleting of old " + dst);
throw new IOException("Failed deleting of old " + dst);
}
} else {
LOG.warn("Found existing old edits file and we have less entries. Deleting " + wap.p
+ ", length=" + fs.getFileStatus(wap.p).getLen());
if (!fs.delete(wap.p, false)) {
LOG.warn("Failed deleting of " + wap.p);
throw new IOException("Failed deleting of " + wap.p);
}
}
}
/**
* Close all of the output streams.
* @return the list of paths written.
*/
private List close() throws IOException {
Preconditions.checkState(!closeAndCleanCompleted);
final List paths = new ArrayList();
final List thrown = Lists.newArrayList();
ThreadPoolExecutor closeThreadPool = Threads.getBoundedCachedThreadPool(numThreads, 30L,
TimeUnit.SECONDS, new ThreadFactory() {
private int count = 1;
@Override
public Thread newThread(Runnable r) {
Thread t = new Thread(r, "split-log-closeStream-" + count++);
return t;
}
});
CompletionService completionService =
new ExecutorCompletionService(closeThreadPool);
for (final Map.Entry writersEntry : writers.entrySet()) {
if (LOG.isTraceEnabled()) {
LOG.trace("Submitting close of " + ((WriterAndPath)writersEntry.getValue()).p);
}
completionService.submit(new Callable() {
@Override
public Void call() throws Exception {
WriterAndPath wap = (WriterAndPath) writersEntry.getValue();
if (LOG.isTraceEnabled()) LOG.trace("Closing " + wap.p);
try {
wap.w.close();
} catch (IOException ioe) {
LOG.error("Couldn't close log at " + wap.p, ioe);
thrown.add(ioe);
return null;
}
if (LOG.isDebugEnabled()) {
LOG.debug("Closed wap " + wap.p + " (wrote " + wap.editsWritten
+ " edits, skipped " + wap.editsSkipped + " edits in "
+ (wap.nanosSpent / 1000 / 1000) + "ms");
}
if (wap.editsWritten == 0) {
// just remove the empty recovered.edits file
if (fs.exists(wap.p) && !fs.delete(wap.p, false)) {
LOG.warn("Failed deleting empty " + wap.p);
throw new IOException("Failed deleting empty " + wap.p);
}
return null;
}
Path dst = getCompletedRecoveredEditsFilePath(wap.p,
regionMaximumEditLogSeqNum.get(writersEntry.getKey()));
try {
if (!dst.equals(wap.p) && fs.exists(dst)) {
deleteOneWithFewerEntries(wap, dst);
}
// Skip the unit tests which create a splitter that reads and
// writes the data without touching disk.
// TestHLogSplit#testThreading is an example.
if (fs.exists(wap.p)) {
if (!fs.rename(wap.p, dst)) {
throw new IOException("Failed renaming " + wap.p + " to " + dst);
}
LOG.info("Rename " + wap.p + " to " + dst);
}
} catch (IOException ioe) {
LOG.error("Couldn't rename " + wap.p + " to " + dst, ioe);
thrown.add(ioe);
return null;
}
paths.add(dst);
return null;
}
});
}
boolean progress_failed = false;
try {
for (int i = 0, n = this.writers.size(); i < n; i++) {
Future future = completionService.take();
future.get();
if (!progress_failed && reporter != null && !reporter.progress()) {
progress_failed = true;
}
}
} catch (InterruptedException e) {
IOException iie = new InterruptedIOException();
iie.initCause(e);
throw iie;
} catch (ExecutionException e) {
throw new IOException(e.getCause());
} finally {
closeThreadPool.shutdownNow();
}
if (!thrown.isEmpty()) {
throw MultipleIOException.createIOException(thrown);
}
writersClosed = true;
closeAndCleanCompleted = true;
if (progress_failed) {
return null;
}
return paths;
}
private List closeLogWriters(List thrown) throws IOException {
if (writersClosed) {
return thrown;
}
if (thrown == null) {
thrown = Lists.newArrayList();
}
try {
for (WriterThread t : writerThreads) {
while (t.isAlive()) {
t.shouldStop = true;
t.interrupt();
try {
t.join(10);
} catch (InterruptedException e) {
IOException iie = new InterruptedIOException();
iie.initCause(e);
throw iie;
}
}
}
} finally {
synchronized (writers) {
WriterAndPath wap = null;
for (SinkWriter tmpWAP : writers.values()) {
try {
wap = (WriterAndPath) tmpWAP;
wap.w.close();
} catch (IOException ioe) {
LOG.error("Couldn't close log at " + wap.p, ioe);
thrown.add(ioe);
continue;
}
LOG.info("Closed log " + wap.p + " (wrote " + wap.editsWritten + " edits in "
+ (wap.nanosSpent / 1000 / 1000) + "ms)");
}
}
writersClosed = true;
}
return thrown;
}
/**
* Get a writer and path for a log starting at the given entry. This function is threadsafe so
* long as multiple threads are always acting on different regions.
* @return null if this region shouldn't output any logs
*/
private WriterAndPath getWriterAndPath(Entry entry) throws IOException {
byte region[] = entry.getKey().getEncodedRegionName();
WriterAndPath ret = (WriterAndPath) writers.get(region);
if (ret != null) {
return ret;
}
// If we already decided that this region doesn't get any output
// we don't need to check again.
if (blacklistedRegions.contains(region)) {
return null;
}
ret = createWAP(region, entry, rootDir);
if (ret == null) {
blacklistedRegions.add(region);
return null;
}
writers.put(region, ret);
return ret;
}
/**
* @return a path with a write for that path. caller should close.
*/
private WriterAndPath createWAP(byte[] region, Entry entry, Path rootdir) throws IOException {
Path regionedits = getRegionSplitEditsPath(fs, entry, rootdir,
fileBeingSplit.getPath().getName());
if (regionedits == null) {
return null;
}
if (fs.exists(regionedits)) {
LOG.warn("Found old edits file. It could be the "
+ "result of a previous failed split attempt. Deleting " + regionedits + ", length="
+ fs.getFileStatus(regionedits).getLen());
if (!fs.delete(regionedits, false)) {
LOG.warn("Failed delete of old " + regionedits);
}
}
Writer w = createWriter(regionedits);
LOG.debug("Creating writer path=" + regionedits);
return new WriterAndPath(regionedits, w, entry.getKey().getLogSeqNum());
}
private void filterCellByStore(Entry logEntry) {
Map maxSeqIdInStores =
regionMaxSeqIdInStores.get(Bytes.toString(logEntry.getKey().getEncodedRegionName()));
if (maxSeqIdInStores == null || maxSeqIdInStores.isEmpty()) {
return;
}
// Create the array list for the cells that aren't filtered.
// We make the assumption that most cells will be kept.
ArrayList keptCells = new ArrayList(logEntry.getEdit().getCells().size());
for (Cell cell : logEntry.getEdit().getCells()) {
if (CellUtil.matchingFamily(cell, WALEdit.METAFAMILY)) {
keptCells.add(cell);
} else {
byte[] family = CellUtil.cloneFamily(cell);
Long maxSeqId = maxSeqIdInStores.get(family);
// Do not skip cell even if maxSeqId is null. Maybe we are in a rolling upgrade,
// or the master was crashed before and we can not get the information.
if (maxSeqId == null || maxSeqId.longValue() < logEntry.getKey().getLogSeqNum()) {
keptCells.add(cell);
}
}
}
// Anything in the keptCells array list is still live.
// So rather than removing the cells from the array list
// which would be an O(n^2) operation, we just replace the list
logEntry.getEdit().setCells(keptCells);
}
@Override
public void append(RegionEntryBuffer buffer) throws IOException {
List entries = buffer.entryBuffer;
if (entries.isEmpty()) {
LOG.warn("got an empty buffer, skipping");
return;
}
WriterAndPath wap = null;
long startTime = System.nanoTime();
try {
int editsCount = 0;
for (Entry logEntry : entries) {
if (wap == null) {
wap = getWriterAndPath(logEntry);
if (wap == null) {
if (LOG.isDebugEnabled()) {
LOG.debug("getWriterAndPath decided we don't need to write edits for " + logEntry);
}
return;
}
}
filterCellByStore(logEntry);
if (!logEntry.getEdit().isEmpty()) {
wap.w.append(logEntry);
this.updateRegionMaximumEditLogSeqNum(logEntry);
editsCount++;
} else {
wap.incrementSkippedEdits(1);
}
}
// Pass along summary statistics
wap.incrementEdits(editsCount);
wap.incrementNanoTime(System.nanoTime() - startTime);
} catch (IOException e) {
e = RemoteExceptionHandler.checkIOException(e);
LOG.fatal(" Got while writing log entry to log", e);
throw e;
}
}
@Override
public boolean keepRegionEvent(Entry entry) {
ArrayList cells = entry.getEdit().getCells();
for (int i = 0; i < cells.size(); i++) {
if (WALEdit.isCompactionMarker(cells.get(i))) {
return true;
}
}
return false;
}
/**
* @return a map from encoded region ID to the number of edits written out for that region.
*/
@Override
public Map getOutputCounts() {
TreeMap ret = new TreeMap(Bytes.BYTES_COMPARATOR);
synchronized (writers) {
for (Map.Entry entry : writers.entrySet()) {
ret.put(entry.getKey(), entry.getValue().editsWritten);
}
}
return ret;
}
@Override
public int getNumberOfRecoveredRegions() {
return writers.size();
}
}
/**
* Class wraps the actual writer which writes data out and related statistics
*/
public abstract static class SinkWriter {
/* Count of edits written to this path */
long editsWritten = 0;
/* Count of edits skipped to this path */
long editsSkipped = 0;
/* Number of nanos spent writing to this log */
long nanosSpent = 0;
void incrementEdits(int edits) {
editsWritten += edits;
}
void incrementSkippedEdits(int skipped) {
editsSkipped += skipped;
}
void incrementNanoTime(long nanos) {
nanosSpent += nanos;
}
}
/**
* Private data structure that wraps a Writer and its Path, also collecting statistics about the
* data written to this output.
*/
private final static class WriterAndPath extends SinkWriter {
final Path p;
final Writer w;
final long minLogSeqNum;
WriterAndPath(final Path p, final Writer w, final long minLogSeqNum) {
this.p = p;
this.w = w;
this.minLogSeqNum = minLogSeqNum;
}
}
/**
* Class that manages to replay edits from WAL files directly to assigned fail over region servers
*/
class LogReplayOutputSink extends OutputSink {
private static final double BUFFER_THRESHOLD = 0.35;
private static final String KEY_DELIMITER = "#";
private long waitRegionOnlineTimeOut;
private final Set recoveredRegions = Collections.synchronizedSet(new HashSet());
private final Map writers =
new ConcurrentHashMap();
// online encoded region name -> region location map
private final Map onlineRegions =
new ConcurrentHashMap();
private Map tableNameToHConnectionMap = Collections
.synchronizedMap(new TreeMap());
/**
* Map key -> value layout
* : -> Queue
*/
private Map>> serverToBufferQueueMap =
new ConcurrentHashMap>>();
private List thrown = new ArrayList();
// The following sink is used in distrubitedLogReplay mode for entries of regions in a disabling
// table. It's a limitation of distributedLogReplay. Because log replay needs a region is
// assigned and online before it can replay wal edits while regions of disabling/disabled table
// won't be assigned by AM. We can retire this code after HBASE-8234.
private LogRecoveredEditsOutputSink logRecoveredEditsOutputSink;
private boolean hasEditsInDisablingOrDisabledTables = false;
public LogReplayOutputSink(PipelineController controller, EntryBuffers entryBuffers,
int numWriters) {
super(controller, entryBuffers, numWriters);
this.waitRegionOnlineTimeOut = conf.getInt(HConstants.HBASE_SPLITLOG_MANAGER_TIMEOUT,
ZKSplitLogManagerCoordination.DEFAULT_TIMEOUT);
this.logRecoveredEditsOutputSink = new LogRecoveredEditsOutputSink(controller,
entryBuffers, numWriters);
this.logRecoveredEditsOutputSink.setReporter(reporter);
}
@Override
public void append(RegionEntryBuffer buffer) throws IOException {
List entries = buffer.entryBuffer;
if (entries.isEmpty()) {
LOG.warn("got an empty buffer, skipping");
return;
}
// check if current region in a disabling or disabled table
if (disablingOrDisabledTables.contains(buffer.tableName)) {
// need fall back to old way
logRecoveredEditsOutputSink.append(buffer);
hasEditsInDisablingOrDisabledTables = true;
// store regions we have recovered so far
addToRecoveredRegions(Bytes.toString(buffer.encodedRegionName));
return;
}
// group entries by region servers
groupEditsByServer(entries);
// process workitems
String maxLocKey = null;
int maxSize = 0;
List> maxQueue = null;
synchronized (this.serverToBufferQueueMap) {
for (String key : this.serverToBufferQueueMap.keySet()) {
List> curQueue = this.serverToBufferQueueMap.get(key);
if (curQueue.size() > maxSize) {
maxSize = curQueue.size();
maxQueue = curQueue;
maxLocKey = key;
}
}
if (maxSize < minBatchSize
&& entryBuffers.totalBuffered < BUFFER_THRESHOLD * entryBuffers.maxHeapUsage) {
// buffer more to process
return;
} else if (maxSize > 0) {
this.serverToBufferQueueMap.remove(maxLocKey);
}
}
if (maxSize > 0) {
processWorkItems(maxLocKey, maxQueue);
}
}
private void addToRecoveredRegions(String encodedRegionName) {
if (!recoveredRegions.contains(encodedRegionName)) {
recoveredRegions.add(encodedRegionName);
}
}
/**
* Helper function to group WALEntries to individual region servers
* @throws IOException
*/
private void groupEditsByServer(List entries) throws IOException {
Set nonExistentTables = null;
Long cachedLastFlushedSequenceId = -1l;
for (Entry entry : entries) {
WALEdit edit = entry.getEdit();
TableName table = entry.getKey().getTablename();
// clear scopes which isn't needed for recovery
entry.getKey().setScopes(null);
String encodeRegionNameStr = Bytes.toString(entry.getKey().getEncodedRegionName());
// skip edits of non-existent tables
if (nonExistentTables != null && nonExistentTables.contains(table)) {
this.skippedEdits.incrementAndGet();
continue;
}
Map maxStoreSequenceIds = null;
boolean needSkip = false;
HRegionLocation loc = null;
String locKey = null;
List cells = edit.getCells();
List skippedCells = new ArrayList();
HConnection hconn = this.getConnectionByTableName(table);
for (Cell cell : cells) {
byte[] row = CellUtil.cloneRow(cell);
byte[] family = CellUtil.cloneFamily(cell);
boolean isCompactionEntry = false;
if (CellUtil.matchingFamily(cell, WALEdit.METAFAMILY)) {
CompactionDescriptor compaction = WALEdit.getCompaction(cell);
if (compaction != null && compaction.hasRegionName()) {
try {
byte[][] regionName = HRegionInfo.parseRegionName(compaction.getRegionName()
.toByteArray());
row = regionName[1]; // startKey of the region
family = compaction.getFamilyName().toByteArray();
isCompactionEntry = true;
} catch (Exception ex) {
LOG.warn("Unexpected exception received, ignoring " + ex);
skippedCells.add(cell);
continue;
}
} else {
skippedCells.add(cell);
continue;
}
}
try {
loc =
locateRegionAndRefreshLastFlushedSequenceId(hconn, table, row,
encodeRegionNameStr);
// skip replaying the compaction if the region is gone
if (isCompactionEntry && !encodeRegionNameStr.equalsIgnoreCase(
loc.getRegionInfo().getEncodedName())) {
LOG.info("Not replaying a compaction marker for an older region: "
+ encodeRegionNameStr);
needSkip = true;
}
} catch (TableNotFoundException ex) {
// table has been deleted so skip edits of the table
LOG.info("Table " + table + " doesn't exist. Skip log replay for region "
+ encodeRegionNameStr);
lastFlushedSequenceIds.put(encodeRegionNameStr, Long.MAX_VALUE);
if (nonExistentTables == null) {
nonExistentTables = new TreeSet();
}
nonExistentTables.add(table);
this.skippedEdits.incrementAndGet();
needSkip = true;
break;
}
cachedLastFlushedSequenceId =
lastFlushedSequenceIds.get(loc.getRegionInfo().getEncodedName());
if (cachedLastFlushedSequenceId != null
&& cachedLastFlushedSequenceId >= entry.getKey().getLogSeqNum()) {
// skip the whole WAL entry
this.skippedEdits.incrementAndGet();
needSkip = true;
break;
} else {
if (maxStoreSequenceIds == null) {
maxStoreSequenceIds =
regionMaxSeqIdInStores.get(loc.getRegionInfo().getEncodedName());
}
if (maxStoreSequenceIds != null) {
Long maxStoreSeqId = maxStoreSequenceIds.get(family);
if (maxStoreSeqId == null || maxStoreSeqId >= entry.getKey().getLogSeqNum()) {
// skip current kv if column family doesn't exist anymore or already flushed
skippedCells.add(cell);
continue;
}
}
}
}
// skip the edit
if (loc == null || needSkip) continue;
if (!skippedCells.isEmpty()) {
cells.removeAll(skippedCells);
}
synchronized (serverToBufferQueueMap) {
locKey = loc.getHostnamePort() + KEY_DELIMITER + table;
List> queue = serverToBufferQueueMap.get(locKey);
if (queue == null) {
queue =
Collections.synchronizedList(new ArrayList>());
serverToBufferQueueMap.put(locKey, queue);
}
queue.add(new Pair(loc, entry));
}
// store regions we have recovered so far
addToRecoveredRegions(loc.getRegionInfo().getEncodedName());
}
}
/**
* Locate destination region based on table name & row. This function also makes sure the
* destination region is online for replay.
* @throws IOException
*/
private HRegionLocation locateRegionAndRefreshLastFlushedSequenceId(HConnection hconn,
TableName table, byte[] row, String originalEncodedRegionName) throws IOException {
// fetch location from cache
HRegionLocation loc = onlineRegions.get(originalEncodedRegionName);
if(loc != null) return loc;
// fetch location from hbase:meta directly without using cache to avoid hit old dead server
loc = hconn.getRegionLocation(table, row, true);
if (loc == null) {
throw new IOException("Can't locate location for row:" + Bytes.toString(row)
+ " of table:" + table);
}
// check if current row moves to a different region due to region merge/split
if (!originalEncodedRegionName.equalsIgnoreCase(loc.getRegionInfo().getEncodedName())) {
// originalEncodedRegionName should have already flushed
lastFlushedSequenceIds.put(originalEncodedRegionName, Long.MAX_VALUE);
HRegionLocation tmpLoc = onlineRegions.get(loc.getRegionInfo().getEncodedName());
if (tmpLoc != null) return tmpLoc;
}
Long lastFlushedSequenceId = -1l;
AtomicBoolean isRecovering = new AtomicBoolean(true);
loc = waitUntilRegionOnline(loc, row, this.waitRegionOnlineTimeOut, isRecovering);
if (!isRecovering.get()) {
// region isn't in recovering at all because WAL file may contain a region that has
// been moved to somewhere before hosting RS fails
lastFlushedSequenceIds.put(loc.getRegionInfo().getEncodedName(), Long.MAX_VALUE);
LOG.info("logReplay skip region: " + loc.getRegionInfo().getEncodedName()
+ " because it's not in recovering.");
} else {
Long cachedLastFlushedSequenceId =
lastFlushedSequenceIds.get(loc.getRegionInfo().getEncodedName());
// retrieve last flushed sequence Id from ZK. Because region postOpenDeployTasks will
// update the value for the region
RegionStoreSequenceIds ids =
csm.getSplitLogWorkerCoordination().getRegionFlushedSequenceId(failedServerName,
loc.getRegionInfo().getEncodedName());
if (ids != null) {
lastFlushedSequenceId = ids.getLastFlushedSequenceId();
Map storeIds = new TreeMap(Bytes.BYTES_COMPARATOR);
List maxSeqIdInStores = ids.getStoreSequenceIdList();
for (StoreSequenceId id : maxSeqIdInStores) {
storeIds.put(id.getFamilyName().toByteArray(), id.getSequenceId());
}
regionMaxSeqIdInStores.put(loc.getRegionInfo().getEncodedName(), storeIds);
}
if (cachedLastFlushedSequenceId == null
|| lastFlushedSequenceId > cachedLastFlushedSequenceId) {
lastFlushedSequenceIds.put(loc.getRegionInfo().getEncodedName(), lastFlushedSequenceId);
}
}
onlineRegions.put(loc.getRegionInfo().getEncodedName(), loc);
return loc;
}
private void processWorkItems(String key, List> actions)
throws IOException {
RegionServerWriter rsw = null;
long startTime = System.nanoTime();
try {
rsw = getRegionServerWriter(key);
rsw.sink.replayEntries(actions);
// Pass along summary statistics
rsw.incrementEdits(actions.size());
rsw.incrementNanoTime(System.nanoTime() - startTime);
} catch (IOException e) {
e = RemoteExceptionHandler.checkIOException(e);
LOG.fatal(" Got while writing log entry to log", e);
throw e;
}
}
/**
* Wait until region is online on the destination region server
* @param loc
* @param row
* @param timeout How long to wait
* @param isRecovering Recovering state of the region interested on destination region server.
* @return True when region is online on the destination region server
* @throws InterruptedException
*/
private HRegionLocation waitUntilRegionOnline(HRegionLocation loc, byte[] row,
final long timeout, AtomicBoolean isRecovering)
throws IOException {
final long endTime = EnvironmentEdgeManager.currentTime() + timeout;
final long pause = conf.getLong(HConstants.HBASE_CLIENT_PAUSE,
HConstants.DEFAULT_HBASE_CLIENT_PAUSE);
boolean reloadLocation = false;
TableName tableName = loc.getRegionInfo().getTable();
int tries = 0;
Throwable cause = null;
while (endTime > EnvironmentEdgeManager.currentTime()) {
try {
// Try and get regioninfo from the hosting server.
HConnection hconn = getConnectionByTableName(tableName);
if(reloadLocation) {
loc = hconn.getRegionLocation(tableName, row, true);
}
BlockingInterface remoteSvr = hconn.getAdmin(loc.getServerName());
HRegionInfo region = loc.getRegionInfo();
try {
GetRegionInfoRequest request =
RequestConverter.buildGetRegionInfoRequest(region.getRegionName());
GetRegionInfoResponse response = remoteSvr.getRegionInfo(null, request);
if (HRegionInfo.convert(response.getRegionInfo()) != null) {
isRecovering.set((response.hasIsRecovering()) ? response.getIsRecovering() : true);
return loc;
}
} catch (ServiceException se) {
throw ProtobufUtil.getRemoteException(se);
}
} catch (IOException e) {
cause = e.getCause();
if(!(cause instanceof RegionOpeningException)) {
reloadLocation = true;
}
}
long expectedSleep = ConnectionUtils.getPauseTime(pause, tries);
try {
Thread.sleep(expectedSleep);
} catch (InterruptedException e) {
throw new IOException("Interrupted when waiting region " +
loc.getRegionInfo().getEncodedName() + " online.", e);
}
tries++;
}
throw new IOException("Timeout when waiting region " + loc.getRegionInfo().getEncodedName() +
" online for " + timeout + " milliseconds.", cause);
}
@Override
public boolean flush() throws IOException {
String curLoc = null;
int curSize = 0;
List> curQueue = null;
synchronized (this.serverToBufferQueueMap) {
for (String locationKey : this.serverToBufferQueueMap.keySet()) {
curQueue = this.serverToBufferQueueMap.get(locationKey);
if (!curQueue.isEmpty()) {
curSize = curQueue.size();
curLoc = locationKey;
break;
}
}
if (curSize > 0) {
this.serverToBufferQueueMap.remove(curLoc);
}
}
if (curSize > 0) {
this.processWorkItems(curLoc, curQueue);
// We should already have control of the monitor; ensure this is the case.
synchronized(controller.dataAvailable) {
controller.dataAvailable.notifyAll();
}
return true;
}
return false;
}
@Override
public boolean keepRegionEvent(Entry entry) {
return true;
}
void addWriterError(Throwable t) {
thrown.add(t);
}
@Override
public List finishWritingAndClose() throws IOException {
try {
if (!finishWriting(false)) {
return null;
}
if (hasEditsInDisablingOrDisabledTables) {
splits = logRecoveredEditsOutputSink.finishWritingAndClose();
} else {
splits = new ArrayList();
}
// returns an empty array in order to keep interface same as old way
return splits;
} finally {
List thrown = closeRegionServerWriters();
if (thrown != null && !thrown.isEmpty()) {
throw MultipleIOException.createIOException(thrown);
}
}
}
@Override
int getNumOpenWriters() {
return this.writers.size() + this.logRecoveredEditsOutputSink.getNumOpenWriters();
}
private List closeRegionServerWriters() throws IOException {
List result = null;
if (!writersClosed) {
result = Lists.newArrayList();
try {
for (WriterThread t : writerThreads) {
while (t.isAlive()) {
t.shouldStop = true;
t.interrupt();
try {
t.join(10);
} catch (InterruptedException e) {
IOException iie = new InterruptedIOException();
iie.initCause(e);
throw iie;
}
}
}
} finally {
synchronized (writers) {
for (String locationKey : writers.keySet()) {
RegionServerWriter tmpW = writers.get(locationKey);
try {
tmpW.close();
} catch (IOException ioe) {
LOG.error("Couldn't close writer for region server:" + locationKey, ioe);
result.add(ioe);
}
}
}
// close connections
synchronized (this.tableNameToHConnectionMap) {
for (TableName tableName : this.tableNameToHConnectionMap.keySet()) {
HConnection hconn = this.tableNameToHConnectionMap.get(tableName);
try {
hconn.clearRegionCache();
hconn.close();
} catch (IOException ioe) {
result.add(ioe);
}
}
}
writersClosed = true;
}
}
return result;
}
@Override
public Map getOutputCounts() {
TreeMap ret = new TreeMap(Bytes.BYTES_COMPARATOR);
synchronized (writers) {
for (Map.Entry entry : writers.entrySet()) {
ret.put(Bytes.toBytes(entry.getKey()), entry.getValue().editsWritten);
}
}
return ret;
}
@Override
public int getNumberOfRecoveredRegions() {
return this.recoveredRegions.size();
}
/**
* Get a writer and path for a log starting at the given entry. This function is threadsafe so
* long as multiple threads are always acting on different regions.
* @return null if this region shouldn't output any logs
*/
private RegionServerWriter getRegionServerWriter(String loc) throws IOException {
RegionServerWriter ret = writers.get(loc);
if (ret != null) {
return ret;
}
TableName tableName = getTableFromLocationStr(loc);
if(tableName == null){
throw new IOException("Invalid location string:" + loc + " found. Replay aborted.");
}
HConnection hconn = getConnectionByTableName(tableName);
synchronized (writers) {
ret = writers.get(loc);
if (ret == null) {
ret = new RegionServerWriter(conf, tableName, hconn);
writers.put(loc, ret);
}
}
return ret;
}
private HConnection getConnectionByTableName(final TableName tableName) throws IOException {
HConnection hconn = this.tableNameToHConnectionMap.get(tableName);
if (hconn == null) {
synchronized (this.tableNameToHConnectionMap) {
hconn = this.tableNameToHConnectionMap.get(tableName);
if (hconn == null) {
hconn = HConnectionManager.getConnection(conf);
this.tableNameToHConnectionMap.put(tableName, hconn);
}
}
}
return hconn;
}
private TableName getTableFromLocationStr(String loc) {
/**
* location key is in format #
*/
String[] splits = loc.split(KEY_DELIMITER);
if (splits.length != 2) {
return null;
}
return TableName.valueOf(splits[1]);
}
}
/**
* Private data structure that wraps a receiving RS and collecting statistics about the data
* written to this newly assigned RS.
*/
private final static class RegionServerWriter extends SinkWriter {
final WALEditsReplaySink sink;
RegionServerWriter(final Configuration conf, final TableName tableName, final HConnection conn)
throws IOException {
this.sink = new WALEditsReplaySink(conf, tableName, conn);
}
void close() throws IOException {
}
}
static class CorruptedLogFileException extends Exception {
private static final long serialVersionUID = 1L;
CorruptedLogFileException(String s) {
super(s);
}
}
/** A struct used by getMutationsFromWALEntry */
public static class MutationReplay {
public MutationReplay(MutationType type, Mutation mutation, long nonceGroup, long nonce) {
this.type = type;
this.mutation = mutation;
if(this.mutation.getDurability() != Durability.SKIP_WAL) {
// using ASYNC_WAL for relay
this.mutation.setDurability(Durability.ASYNC_WAL);
}
this.nonceGroup = nonceGroup;
this.nonce = nonce;
}
public final MutationType type;
public final Mutation mutation;
public final long nonceGroup;
public final long nonce;
}
/**
* This function is used to construct mutations from a WALEntry. It also
* reconstructs WALKey & WALEdit from the passed in WALEntry
* @param entry
* @param cells
* @param logEntry pair of WALKey and WALEdit instance stores WALKey and WALEdit instances
* extracted from the passed in WALEntry.
* @param durability
* @return list of Pair<MutationType, Mutation> to be replayed
* @throws IOException
*/
public static List getMutationsFromWALEntry(WALEntry entry, CellScanner cells,
Pair logEntry, Durability durability)
throws IOException {
if (entry == null) {
// return an empty array
return new ArrayList();
}
long replaySeqId = (entry.getKey().hasOrigSequenceNumber()) ?
entry.getKey().getOrigSequenceNumber() : entry.getKey().getLogSequenceNumber();
int count = entry.getAssociatedCellCount();
List mutations = new ArrayList();
Cell previousCell = null;
Mutation m = null;
WALKey key = null;
WALEdit val = null;
if (logEntry != null) val = new WALEdit();
for (int i = 0; i < count; i++) {
// Throw index out of bounds if our cell count is off
if (!cells.advance()) {
throw new ArrayIndexOutOfBoundsException("Expected=" + count + ", index=" + i);
}
Cell cell = cells.current();
if (val != null) val.add(cell);
boolean isNewRowOrType =
previousCell == null || previousCell.getTypeByte() != cell.getTypeByte()
|| !CellUtil.matchingRow(previousCell, cell);
if (isNewRowOrType) {
// Create new mutation
if (CellUtil.isDelete(cell)) {
m = new Delete(cell.getRowArray(), cell.getRowOffset(), cell.getRowLength());
// Deletes don't have nonces.
mutations.add(new MutationReplay(
MutationType.DELETE, m, HConstants.NO_NONCE, HConstants.NO_NONCE));
} else {
m = new Put(cell.getRowArray(), cell.getRowOffset(), cell.getRowLength());
// Puts might come from increment or append, thus we need nonces.
long nonceGroup = entry.getKey().hasNonceGroup()
? entry.getKey().getNonceGroup() : HConstants.NO_NONCE;
long nonce = entry.getKey().hasNonce() ? entry.getKey().getNonce() : HConstants.NO_NONCE;
mutations.add(new MutationReplay(MutationType.PUT, m, nonceGroup, nonce));
}
}
if (CellUtil.isDelete(cell)) {
((Delete) m).addDeleteMarker(cell);
} else {
((Put) m).add(cell);
}
m.setDurability(durability);
previousCell = cell;
}
// reconstruct WALKey
if (logEntry != null) {
org.apache.hadoop.hbase.protobuf.generated.WALProtos.WALKey walKeyProto = entry.getKey();
List clusterIds = new ArrayList(walKeyProto.getClusterIdsCount());
for (HBaseProtos.UUID uuid : entry.getKey().getClusterIdsList()) {
clusterIds.add(new UUID(uuid.getMostSigBits(), uuid.getLeastSigBits()));
}
// we use HLogKey here instead of WALKey directly to support legacy coprocessors.
key = new HLogKey(walKeyProto.getEncodedRegionName().toByteArray(), TableName.valueOf(
walKeyProto.getTableName().toByteArray()), replaySeqId, walKeyProto.getWriteTime(),
clusterIds, walKeyProto.getNonceGroup(), walKeyProto.getNonce(), null);
logEntry.setFirst(key);
logEntry.setSecond(val);
}
return mutations;
}
}
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