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Main functionality for HBase
/**
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
* regarding copyright ownership. The ASF licenses this file
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.apache.hadoop.hbase.util;
import java.io.IOException;
import java.util.ArrayList;
import java.util.Arrays;
import java.util.Collections;
import java.util.HashSet;
import java.util.List;
import java.util.Set;
import java.util.concurrent.Callable;
import java.util.concurrent.ConcurrentHashMap;
import java.util.concurrent.ExecutionException;
import java.util.concurrent.ExecutorService;
import java.util.concurrent.Executors;
import java.util.concurrent.Future;
import org.apache.commons.cli.CommandLine;
import org.apache.commons.cli.CommandLineParser;
import org.apache.commons.cli.GnuParser;
import org.apache.commons.cli.HelpFormatter;
import org.apache.commons.cli.Option;
import org.apache.commons.cli.Options;
import org.apache.commons.cli.ParseException;
import org.apache.commons.logging.Log;
import org.apache.commons.logging.LogFactory;
import org.apache.hadoop.conf.Configured;
import org.apache.hadoop.fs.FSDataInputStream;
import org.apache.hadoop.fs.FileStatus;
import org.apache.hadoop.fs.FileSystem;
import org.apache.hadoop.fs.Path;
import org.apache.hadoop.hbase.HBaseConfiguration;
import org.apache.hadoop.hbase.HConstants;
import org.apache.hadoop.hbase.NamespaceDescriptor;
import org.apache.hadoop.hbase.io.FileLink;
import org.apache.hadoop.hbase.io.HFileLink;
import org.apache.hadoop.hbase.regionserver.HRegionFileSystem;
import org.apache.hadoop.hbase.regionserver.StoreFileInfo;
import org.apache.hadoop.util.Tool;
import org.apache.hadoop.util.ToolRunner;
/**
* Tool to detect presence of any HFileV1 in the given directory. It prints all such regions which
* have such files.
*
* To print the help section of the tool:
*
*
* - ./bin/hbase org.apache.hadoop.hbase.util.HFileV1Detector --h or,
* - java -cp `hbase classpath` org.apache.hadoop.hbase.util.HFileV1Detector --h
*
*
* It also supports -h, --help, -help options.
*
*/
public class HFileV1Detector extends Configured implements Tool {
private FileSystem fs;
private static final Log LOG = LogFactory.getLog(HFileV1Detector.class);
private static final int DEFAULT_NUM_OF_THREADS = 10;
/**
* Pre-namespace archive directory
*/
private static final String PRE_NS_DOT_ARCHIVE = ".archive";
/**
* Pre-namespace tmp directory
*/
private static final String PRE_NS_DOT_TMP = ".tmp";
private int numOfThreads;
/**
* directory to start the processing.
*/
private Path targetDirPath;
/**
* executor for processing regions.
*/
private ExecutorService exec;
/**
* Keeps record of processed tables.
*/
private final Set processedTables = new HashSet();
/**
* set of corrupted HFiles (with undetermined major version)
*/
private final Set corruptedHFiles = Collections
.newSetFromMap(new ConcurrentHashMap());
/**
* set of HfileV1;
*/
private final Set hFileV1Set = Collections
.newSetFromMap(new ConcurrentHashMap());
private Options options = new Options();
/**
* used for computing pre-namespace paths for hfilelinks
*/
private Path defaultNamespace;
public HFileV1Detector() {
Option pathOption = new Option("p", "path", true, "Path to a table, or hbase installation");
pathOption.setRequired(false);
options.addOption(pathOption);
Option threadOption = new Option("n", "numberOfThreads", true,
"Number of threads to use while processing HFiles.");
threadOption.setRequired(false);
options.addOption(threadOption);
options.addOption("h", "help", false, "Help");
}
private boolean parseOption(String[] args) throws ParseException, IOException {
if (args.length == 0) {
return true; // no args will process with default values.
}
CommandLineParser parser = new GnuParser();
CommandLine cmd = parser.parse(options, args);
if (cmd.hasOption("h")) {
HelpFormatter formatter = new HelpFormatter();
formatter.printHelp("HFileV1Detector", options, true);
System.out
.println("In case no option is provided, it processes hbase.rootdir using 10 threads.");
System.out.println("Example:");
System.out.println(" To detect any HFileV1 in a given hbase installation '/myhbase':");
System.out.println(" $ $HBASE_HOME/bin/hbase " + this.getClass().getName() + " -p /myhbase");
System.out.println();
return false;
}
if (cmd.hasOption("p")) {
this.targetDirPath = new Path(FSUtils.getRootDir(getConf()), cmd.getOptionValue("p"));
}
try {
if (cmd.hasOption("n")) {
int n = Integer.parseInt(cmd.getOptionValue("n"));
if (n < 0 || n > 100) {
LOG.warn("Please use a positive number <= 100 for number of threads."
+ " Continuing with default value " + DEFAULT_NUM_OF_THREADS);
return true;
}
this.numOfThreads = n;
}
} catch (NumberFormatException nfe) {
LOG.error("Please select a valid number for threads");
return false;
}
return true;
}
/**
* Checks for HFileV1.
* @return 0 when no HFileV1 is present.
* 1 when a HFileV1 is present or, when there is a file with corrupt major version
* (neither V1 nor V2).
* -1 in case of any error/exception
*/
@Override
public int run(String args[]) throws IOException, ParseException {
FSUtils.setFsDefault(getConf(), new Path(FSUtils.getRootDir(getConf()).toUri()));
fs = FileSystem.get(getConf());
numOfThreads = DEFAULT_NUM_OF_THREADS;
targetDirPath = FSUtils.getRootDir(getConf());
if (!parseOption(args)) {
System.exit(-1);
}
this.exec = Executors.newFixedThreadPool(numOfThreads);
try {
return processResult(checkForV1Files(targetDirPath));
} catch (Exception e) {
LOG.error(e);
} finally {
exec.shutdown();
fs.close();
}
return -1;
}
private void setDefaultNamespaceDir() throws IOException {
Path dataDir = new Path(FSUtils.getRootDir(getConf()), HConstants.BASE_NAMESPACE_DIR);
defaultNamespace = new Path(dataDir, NamespaceDescriptor.DEFAULT_NAMESPACE_NAME_STR);
}
private int processResult(Set regionsWithHFileV1) {
LOG.info("Result: \n");
printSet(processedTables, "Tables Processed: ");
int count = hFileV1Set.size();
LOG.info("Count of HFileV1: " + count);
if (count > 0) printSet(hFileV1Set, "HFileV1:");
count = corruptedHFiles.size();
LOG.info("Count of corrupted files: " + count);
if (count > 0) printSet(corruptedHFiles, "Corrupted Files: ");
count = regionsWithHFileV1.size();
LOG.info("Count of Regions with HFileV1: " + count);
if (count > 0) printSet(regionsWithHFileV1, "Regions to Major Compact: ");
return (hFileV1Set.isEmpty() && corruptedHFiles.isEmpty()) ? 0 : 1;
}
private void printSet(Set result, String msg) {
LOG.info(msg);
for (Path p : result) {
LOG.info(p);
}
}
/**
* Takes a directory path, and lists out any HFileV1, if present.
* @param targetDir directory to start looking for HFilev1.
* @return set of Regions that have HFileV1
* @throws IOException
*/
private Set checkForV1Files(Path targetDir) throws IOException {
LOG.info("Target dir is: " + targetDir);
if (!fs.exists(targetDir)) {
throw new IOException("The given path does not exist: " + targetDir);
}
if (isTableDir(fs, targetDir)) {
processedTables.add(targetDir);
return processTable(targetDir);
}
Set regionsWithHFileV1 = new HashSet();
FileStatus[] fsStats = fs.listStatus(targetDir);
for (FileStatus fsStat : fsStats) {
if (isTableDir(fs, fsStat.getPath()) && !isRootTable(fsStat.getPath())) {
processedTables.add(fsStat.getPath());
// look for regions and find out any v1 file.
regionsWithHFileV1.addAll(processTable(fsStat.getPath()));
} else {
LOG.info("Ignoring path: " + fsStat.getPath());
}
}
return regionsWithHFileV1;
}
/**
* Ignore ROOT table as it doesn't exist in 0.96.
* @param path
*/
private boolean isRootTable(Path path) {
if (path != null && path.toString().endsWith("-ROOT-")) return true;
return false;
}
/**
* Find out regions in the table which have HFileV1.
* @param tableDir
* @return the set of regions containing HFile v1.
* @throws IOException
*/
private Set processTable(Path tableDir) throws IOException {
// list out the regions and then process each file in it.
LOG.debug("processing table: " + tableDir);
List> regionLevelResults = new ArrayList>();
Set regionsWithHFileV1 = new HashSet();
FileStatus[] fsStats = fs.listStatus(tableDir);
for (FileStatus fsStat : fsStats) {
// process each region
if (isRegionDir(fs, fsStat.getPath())) {
regionLevelResults.add(processRegion(fsStat.getPath()));
}
}
for (Future f : regionLevelResults) {
try {
if (f.get() != null) {
regionsWithHFileV1.add(f.get());
}
} catch (InterruptedException e) {
LOG.error(e);
} catch (ExecutionException e) {
LOG.error(e); // might be a bad hfile. We print it at the end.
}
}
return regionsWithHFileV1;
}
/**
* Each region is processed by a separate handler. If a HRegion has a hfileV1, its path is
* returned as the future result, otherwise, a null value is returned.
* @param regionDir Region to process.
* @return corresponding Future object.
*/
private Future processRegion(final Path regionDir) {
LOG.debug("processing region: " + regionDir);
Callable regionCallable = new Callable() {
@Override
public Path call() throws Exception {
for (Path familyDir : FSUtils.getFamilyDirs(fs, regionDir)) {
FileStatus[] storeFiles = FSUtils.listStatus(fs, familyDir);
if (storeFiles == null || storeFiles.length == 0) continue;
for (FileStatus storeFile : storeFiles) {
Path storeFilePath = storeFile.getPath();
FSDataInputStream fsdis = null;
long lenToRead = 0;
try {
// check whether this path is a reference.
if (StoreFileInfo.isReference(storeFilePath)) continue;
// check whether this path is a HFileLink.
else if (HFileLink.isHFileLink(storeFilePath)) {
FileLink fLink = getFileLinkWithPreNSPath(storeFilePath);
fsdis = fLink.open(fs);
lenToRead = fLink.getFileStatus(fs).getLen();
} else {
// a regular hfile
fsdis = fs.open(storeFilePath);
lenToRead = storeFile.getLen();
}
int majorVersion = computeMajorVersion(fsdis, lenToRead);
if (majorVersion == 1) {
hFileV1Set.add(storeFilePath);
// return this region path, as it needs to be compacted.
return regionDir;
}
if (majorVersion > 2 || majorVersion < 1) throw new IllegalArgumentException(
"Incorrect major version: " + majorVersion);
} catch (Exception iae) {
corruptedHFiles.add(storeFilePath);
LOG.error("Got exception while reading trailer for file: "+ storeFilePath, iae);
} finally {
if (fsdis != null) fsdis.close();
}
}
}
return null;
}
private int computeMajorVersion(FSDataInputStream istream, long fileSize)
throws IOException {
//read up the last int of the file. Major version is in the last 3 bytes.
long seekPoint = fileSize - Bytes.SIZEOF_INT;
if (seekPoint < 0)
throw new IllegalArgumentException("File too small, no major version found");
// Read the version from the last int of the file.
istream.seek(seekPoint);
int version = istream.readInt();
// Extract and return the major version
return version & 0x00ffffff;
}
};
Future f = exec.submit(regionCallable);
return f;
}
/**
* Creates a FileLink which adds pre-namespace paths in its list of available paths. This is used
* when reading a snapshot file in a pre-namespace file layout, for example, while upgrading.
* @param storeFilePath
* @return a FileLink which could read from pre-namespace paths.
* @throws IOException
*/
public FileLink getFileLinkWithPreNSPath(Path storeFilePath) throws IOException {
HFileLink link = HFileLink.buildFromHFileLinkPattern(getConf(), storeFilePath);
List pathsToProcess = getPreNSPathsForHFileLink(link);
pathsToProcess.addAll(Arrays.asList(link.getLocations()));
return new FileLink(pathsToProcess);
}
private List getPreNSPathsForHFileLink(HFileLink fileLink) throws IOException {
if (defaultNamespace == null) setDefaultNamespaceDir();
List p = new ArrayList();
String relativeTablePath = removeDefaultNSPath(fileLink.getOriginPath());
p.add(getPreNSPath(PRE_NS_DOT_ARCHIVE, relativeTablePath));
p.add(getPreNSPath(PRE_NS_DOT_TMP, relativeTablePath));
p.add(getPreNSPath(null, relativeTablePath));
return p;
}
/**
* Removes the prefix of defaultNamespace from the path.
* @param originalPath
*/
private String removeDefaultNSPath(Path originalPath) {
String pathStr = originalPath.toString();
if (!pathStr.startsWith(defaultNamespace.toString())) return pathStr;
return pathStr.substring(defaultNamespace.toString().length() + 1);
}
private Path getPreNSPath(String prefix, String relativeTablePath) throws IOException {
String relativePath = (prefix == null ? relativeTablePath : prefix + Path.SEPARATOR
+ relativeTablePath);
return new Path(FSUtils.getRootDir(getConf()), relativePath);
}
private static boolean isTableDir(final FileSystem fs, final Path path) throws IOException {
// check for old format, of having /table/.tableinfo; hbase:meta doesn't has .tableinfo,
// include it.
if (fs.isFile(path)) return false;
return (FSTableDescriptors.getTableInfoPath(fs, path) != null || FSTableDescriptors
.getCurrentTableInfoStatus(fs, path, false) != null) || path.toString().endsWith(".META.");
}
private static boolean isRegionDir(final FileSystem fs, final Path path) throws IOException {
if (fs.isFile(path)) return false;
Path regionInfo = new Path(path, HRegionFileSystem.REGION_INFO_FILE);
return fs.exists(regionInfo);
}
public static void main(String args[]) throws Exception {
System.exit(ToolRunner.run(HBaseConfiguration.create(), new HFileV1Detector(), args));
}
}