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/*
* Licensed to the Apache Software Foundation (ASF) under one or more
* contributor license agreements. See the NOTICE file distributed with
* this work for additional information regarding copyright ownership.
* The ASF licenses this file to You under the Apache License, Version 2.0
* (the "License"); you may not use this file except in compliance with
* the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.apache.spark.sql.execution
import scala.language.existentials
import org.apache.spark.api.java.function.MapFunction
import org.apache.spark.api.r._
import org.apache.spark.broadcast.Broadcast
import org.apache.spark.rdd.RDD
import org.apache.spark.sql.Row
import org.apache.spark.sql.api.r.SQLUtils._
import org.apache.spark.sql.catalyst.InternalRow
import org.apache.spark.sql.catalyst.expressions._
import org.apache.spark.sql.catalyst.expressions.codegen._
import org.apache.spark.sql.catalyst.expressions.objects.Invoke
import org.apache.spark.sql.catalyst.plans.logical.{EventTimeWatermark, FunctionUtils, LogicalGroupState}
import org.apache.spark.sql.catalyst.plans.physical._
import org.apache.spark.sql.execution.streaming.GroupStateImpl
import org.apache.spark.sql.streaming.GroupStateTimeout
import org.apache.spark.sql.types._
/**
* Physical version of `ObjectProducer`.
*/
trait ObjectProducerExec extends SparkPlan {
// The attribute that reference to the single object field this operator outputs.
protected def outputObjAttr: Attribute
override def output: Seq[Attribute] = outputObjAttr :: Nil
override def producedAttributes: AttributeSet = AttributeSet(outputObjAttr)
def outputObjectType: DataType = outputObjAttr.dataType
}
/**
* Physical version of `ObjectConsumer`.
*/
trait ObjectConsumerExec extends UnaryExecNode {
assert(child.output.length == 1)
// This operator always need all columns of its child, even it doesn't reference to.
override def references: AttributeSet = child.outputSet
def inputObjectType: DataType = child.output.head.dataType
}
/**
* Takes the input row from child and turns it into object using the given deserializer expression.
* The output of this operator is a single-field safe row containing the deserialized object.
*/
case class DeserializeToObjectExec(
deserializer: Expression,
outputObjAttr: Attribute,
child: SparkPlan) extends UnaryExecNode with ObjectProducerExec with CodegenSupport {
override def outputPartitioning: Partitioning = child.outputPartitioning
override def inputRDDs(): Seq[RDD[InternalRow]] = {
child.asInstanceOf[CodegenSupport].inputRDDs()
}
protected override def doProduce(ctx: CodegenContext): String = {
child.asInstanceOf[CodegenSupport].produce(ctx, this)
}
override def doConsume(ctx: CodegenContext, input: Seq[ExprCode], row: ExprCode): String = {
val resultObj = BindReferences.bindReference(deserializer, child.output).genCode(ctx)
consume(ctx, resultObj :: Nil)
}
override protected def doExecute(): RDD[InternalRow] = {
child.execute().mapPartitionsWithIndexInternal { (index, iter) =>
val projection = GenerateSafeProjection.generate(deserializer :: Nil, child.output)
projection.initialize(index)
iter.map(projection)
}
}
}
/**
* Takes the input object from child and turns in into unsafe row using the given serializer
* expression. The output of its child must be a single-field row containing the input object.
*/
case class SerializeFromObjectExec(
serializer: Seq[NamedExpression],
child: SparkPlan) extends ObjectConsumerExec with CodegenSupport {
override def output: Seq[Attribute] = serializer.map(_.toAttribute)
override def outputPartitioning: Partitioning = child.outputPartitioning
override def inputRDDs(): Seq[RDD[InternalRow]] = {
child.asInstanceOf[CodegenSupport].inputRDDs()
}
protected override def doProduce(ctx: CodegenContext): String = {
child.asInstanceOf[CodegenSupport].produce(ctx, this)
}
override def doConsume(ctx: CodegenContext, input: Seq[ExprCode], row: ExprCode): String = {
val resultVars = serializer.map { expr =>
BindReferences.bindReference[Expression](expr, child.output).genCode(ctx)
}
consume(ctx, resultVars)
}
override protected def doExecute(): RDD[InternalRow] = {
child.execute().mapPartitionsWithIndexInternal { (index, iter) =>
val projection = UnsafeProjection.create(serializer)
projection.initialize(index)
iter.map(projection)
}
}
}
/**
* Helper functions for physical operators that work with user defined objects.
*/
object ObjectOperator {
def deserializeRowToObject(
deserializer: Expression,
inputSchema: Seq[Attribute]): InternalRow => Any = {
val proj = GenerateSafeProjection.generate(deserializer :: Nil, inputSchema)
(i: InternalRow) => proj(i).get(0, deserializer.dataType)
}
def deserializeRowToObject(deserializer: Expression): InternalRow => Any = {
val proj = GenerateSafeProjection.generate(deserializer :: Nil)
(i: InternalRow) => proj(i).get(0, deserializer.dataType)
}
def serializeObjectToRow(serializer: Seq[Expression]): Any => UnsafeRow = {
val proj = GenerateUnsafeProjection.generate(serializer)
val objType = serializer.head.collect { case b: BoundReference => b.dataType }.head
val objRow = new SpecificInternalRow(objType :: Nil)
(o: Any) => {
objRow(0) = o
proj(objRow)
}
}
def wrapObjectToRow(objType: DataType): Any => InternalRow = {
val outputRow = new SpecificInternalRow(objType :: Nil)
(o: Any) => {
outputRow(0) = o
outputRow
}
}
def unwrapObjectFromRow(objType: DataType): InternalRow => Any = {
(i: InternalRow) => i.get(0, objType)
}
}
/**
* Applies the given function to input object iterator.
* The output of its child must be a single-field row containing the input object.
*/
case class MapPartitionsExec(
func: Iterator[Any] => Iterator[Any],
outputObjAttr: Attribute,
child: SparkPlan)
extends ObjectConsumerExec with ObjectProducerExec {
override def outputPartitioning: Partitioning = child.outputPartitioning
override protected def doExecute(): RDD[InternalRow] = {
child.execute().mapPartitionsInternal { iter =>
val getObject = ObjectOperator.unwrapObjectFromRow(child.output.head.dataType)
val outputObject = ObjectOperator.wrapObjectToRow(outputObjAttr.dataType)
func(iter.map(getObject)).map(outputObject)
}
}
}
/**
* Applies the given function to each input object.
* The output of its child must be a single-field row containing the input object.
*
* This operator is kind of a safe version of [[ProjectExec]], as its output is custom object,
* we need to use safe row to contain it.
*/
case class MapElementsExec(
func: AnyRef,
outputObjAttr: Attribute,
child: SparkPlan)
extends ObjectConsumerExec with ObjectProducerExec with CodegenSupport {
override def inputRDDs(): Seq[RDD[InternalRow]] = {
child.asInstanceOf[CodegenSupport].inputRDDs()
}
protected override def doProduce(ctx: CodegenContext): String = {
child.asInstanceOf[CodegenSupport].produce(ctx, this)
}
override def doConsume(ctx: CodegenContext, input: Seq[ExprCode], row: ExprCode): String = {
val (funcClass, methodName) = func match {
case m: MapFunction[_, _] => classOf[MapFunction[_, _]] -> "call"
case _ => FunctionUtils.getFunctionOneName(outputObjAttr.dataType, child.output(0).dataType)
}
val funcObj = Literal.create(func, ObjectType(funcClass))
val callFunc = Invoke(funcObj, methodName, outputObjAttr.dataType, child.output)
val result = BindReferences.bindReference(callFunc, child.output).genCode(ctx)
consume(ctx, result :: Nil)
}
override protected def doExecute(): RDD[InternalRow] = {
val callFunc: Any => Any = func match {
case m: MapFunction[_, _] => i => m.asInstanceOf[MapFunction[Any, Any]].call(i)
case _ => func.asInstanceOf[Any => Any]
}
child.execute().mapPartitionsInternal { iter =>
val getObject = ObjectOperator.unwrapObjectFromRow(child.output.head.dataType)
val outputObject = ObjectOperator.wrapObjectToRow(outputObjAttr.dataType)
iter.map(row => outputObject(callFunc(getObject(row))))
}
}
override def outputOrdering: Seq[SortOrder] = child.outputOrdering
override def outputPartitioning: Partitioning = child.outputPartitioning
}
/**
* Applies the given function to each input row, appending the encoded result at the end of the row.
*/
case class AppendColumnsExec(
func: Any => Any,
deserializer: Expression,
serializer: Seq[NamedExpression],
child: SparkPlan) extends UnaryExecNode {
override def output: Seq[Attribute] = child.output ++ serializer.map(_.toAttribute)
override def outputPartitioning: Partitioning = child.outputPartitioning
private def newColumnSchema = serializer.map(_.toAttribute).toStructType
override protected def doExecute(): RDD[InternalRow] = {
child.execute().mapPartitionsInternal { iter =>
val getObject = ObjectOperator.deserializeRowToObject(deserializer, child.output)
val combiner = GenerateUnsafeRowJoiner.create(child.schema, newColumnSchema)
val outputObject = ObjectOperator.serializeObjectToRow(serializer)
iter.map { row =>
val newColumns = outputObject(func(getObject(row)))
combiner.join(row.asInstanceOf[UnsafeRow], newColumns): InternalRow
}
}
}
}
/**
* An optimized version of [[AppendColumnsExec]], that can be executed
* on deserialized object directly.
*/
case class AppendColumnsWithObjectExec(
func: Any => Any,
inputSerializer: Seq[NamedExpression],
newColumnsSerializer: Seq[NamedExpression],
child: SparkPlan) extends ObjectConsumerExec {
override def output: Seq[Attribute] = (inputSerializer ++ newColumnsSerializer).map(_.toAttribute)
override def outputPartitioning: Partitioning = child.outputPartitioning
private def inputSchema = inputSerializer.map(_.toAttribute).toStructType
private def newColumnSchema = newColumnsSerializer.map(_.toAttribute).toStructType
override protected def doExecute(): RDD[InternalRow] = {
child.execute().mapPartitionsInternal { iter =>
val getChildObject = ObjectOperator.unwrapObjectFromRow(child.output.head.dataType)
val outputChildObject = ObjectOperator.serializeObjectToRow(inputSerializer)
val outputNewColumnOjb = ObjectOperator.serializeObjectToRow(newColumnsSerializer)
val combiner = GenerateUnsafeRowJoiner.create(inputSchema, newColumnSchema)
iter.map { row =>
val childObj = getChildObject(row)
val newColumns = outputNewColumnOjb(func(childObj))
combiner.join(outputChildObject(childObj), newColumns): InternalRow
}
}
}
}
/**
* Groups the input rows together and calls the function with each group and an iterator containing
* all elements in the group. The result of this function is flattened before being output.
*/
case class MapGroupsExec(
func: (Any, Iterator[Any]) => TraversableOnce[Any],
keyDeserializer: Expression,
valueDeserializer: Expression,
groupingAttributes: Seq[Attribute],
dataAttributes: Seq[Attribute],
outputObjAttr: Attribute,
child: SparkPlan) extends UnaryExecNode with ObjectProducerExec {
override def outputPartitioning: Partitioning = child.outputPartitioning
override def requiredChildDistribution: Seq[Distribution] =
ClusteredDistribution(groupingAttributes) :: Nil
override def requiredChildOrdering: Seq[Seq[SortOrder]] =
Seq(groupingAttributes.map(SortOrder(_, Ascending)))
override protected def doExecute(): RDD[InternalRow] = {
child.execute().mapPartitionsInternal { iter =>
val grouped = GroupedIterator(iter, groupingAttributes, child.output)
val getKey = ObjectOperator.deserializeRowToObject(keyDeserializer, groupingAttributes)
val getValue = ObjectOperator.deserializeRowToObject(valueDeserializer, dataAttributes)
val outputObject = ObjectOperator.wrapObjectToRow(outputObjAttr.dataType)
grouped.flatMap { case (key, rowIter) =>
val result = func(
getKey(key),
rowIter.map(getValue))
result.map(outputObject)
}
}
}
}
object MapGroupsExec {
def apply(
func: (Any, Iterator[Any], LogicalGroupState[Any]) => TraversableOnce[Any],
keyDeserializer: Expression,
valueDeserializer: Expression,
groupingAttributes: Seq[Attribute],
dataAttributes: Seq[Attribute],
outputObjAttr: Attribute,
timeoutConf: GroupStateTimeout,
child: SparkPlan): MapGroupsExec = {
val watermarkPresent = child.output.exists {
case a: Attribute if a.metadata.contains(EventTimeWatermark.delayKey) => true
case _ => false
}
val f = (key: Any, values: Iterator[Any]) => {
func(key, values, GroupStateImpl.createForBatch(timeoutConf, watermarkPresent))
}
new MapGroupsExec(f, keyDeserializer, valueDeserializer,
groupingAttributes, dataAttributes, outputObjAttr, child)
}
}
/**
* Groups the input rows together and calls the R function with each group and an iterator
* containing all elements in the group.
* The result of this function is flattened before being output.
*/
case class FlatMapGroupsInRExec(
func: Array[Byte],
packageNames: Array[Byte],
broadcastVars: Array[Broadcast[Object]],
inputSchema: StructType,
outputSchema: StructType,
keyDeserializer: Expression,
valueDeserializer: Expression,
groupingAttributes: Seq[Attribute],
dataAttributes: Seq[Attribute],
outputObjAttr: Attribute,
child: SparkPlan) extends UnaryExecNode with ObjectProducerExec {
override def output: Seq[Attribute] = outputObjAttr :: Nil
override def outputPartitioning: Partitioning = child.outputPartitioning
override def producedAttributes: AttributeSet = AttributeSet(outputObjAttr)
override def requiredChildDistribution: Seq[Distribution] =
if (groupingAttributes.isEmpty) {
AllTuples :: Nil
} else {
ClusteredDistribution(groupingAttributes) :: Nil
}
override def requiredChildOrdering: Seq[Seq[SortOrder]] =
Seq(groupingAttributes.map(SortOrder(_, Ascending)))
override protected def doExecute(): RDD[InternalRow] = {
val isSerializedRData = outputSchema == SERIALIZED_R_DATA_SCHEMA
val serializerForR = if (!isSerializedRData) {
SerializationFormats.ROW
} else {
SerializationFormats.BYTE
}
child.execute().mapPartitionsInternal { iter =>
val grouped = GroupedIterator(iter, groupingAttributes, child.output)
val getKey = ObjectOperator.deserializeRowToObject(keyDeserializer, groupingAttributes)
val getValue = ObjectOperator.deserializeRowToObject(valueDeserializer, dataAttributes)
val outputObject = ObjectOperator.wrapObjectToRow(outputObjAttr.dataType)
val runner = new RRunner[Array[Byte]](
func, SerializationFormats.ROW, serializerForR, packageNames, broadcastVars,
isDataFrame = true, colNames = inputSchema.fieldNames,
mode = RRunnerModes.DATAFRAME_GAPPLY)
val groupedRBytes = grouped.map { case (key, rowIter) =>
val deserializedIter = rowIter.map(getValue)
val newIter =
deserializedIter.asInstanceOf[Iterator[Row]].map { row => rowToRBytes(row) }
val newKey = rowToRBytes(getKey(key).asInstanceOf[Row])
(newKey, newIter)
}
val outputIter = runner.compute(groupedRBytes, -1)
if (!isSerializedRData) {
val result = outputIter.map { bytes => bytesToRow(bytes, outputSchema) }
result.map(outputObject)
} else {
val result = outputIter.map { bytes => Row.fromSeq(Seq(bytes)) }
result.map(outputObject)
}
}
}
}
/**
* Co-groups the data from left and right children, and calls the function with each group and 2
* iterators containing all elements in the group from left and right side.
* The result of this function is flattened before being output.
*/
case class CoGroupExec(
func: (Any, Iterator[Any], Iterator[Any]) => TraversableOnce[Any],
keyDeserializer: Expression,
leftDeserializer: Expression,
rightDeserializer: Expression,
leftGroup: Seq[Attribute],
rightGroup: Seq[Attribute],
leftAttr: Seq[Attribute],
rightAttr: Seq[Attribute],
outputObjAttr: Attribute,
left: SparkPlan,
right: SparkPlan) extends BinaryExecNode with ObjectProducerExec {
override def requiredChildDistribution: Seq[Distribution] =
HashClusteredDistribution(leftGroup) :: HashClusteredDistribution(rightGroup) :: Nil
override def requiredChildOrdering: Seq[Seq[SortOrder]] =
leftGroup.map(SortOrder(_, Ascending)) :: rightGroup.map(SortOrder(_, Ascending)) :: Nil
override protected def doExecute(): RDD[InternalRow] = {
left.execute().zipPartitions(right.execute()) { (leftData, rightData) =>
val leftGrouped = GroupedIterator(leftData, leftGroup, left.output)
val rightGrouped = GroupedIterator(rightData, rightGroup, right.output)
val getKey = ObjectOperator.deserializeRowToObject(keyDeserializer, leftGroup)
val getLeft = ObjectOperator.deserializeRowToObject(leftDeserializer, leftAttr)
val getRight = ObjectOperator.deserializeRowToObject(rightDeserializer, rightAttr)
val outputObject = ObjectOperator.wrapObjectToRow(outputObjAttr.dataType)
new CoGroupedIterator(leftGrouped, rightGrouped, leftGroup).flatMap {
case (key, leftResult, rightResult) =>
val result = func(
getKey(key),
leftResult.map(getLeft),
rightResult.map(getRight))
result.map(outputObject)
}
}
}
}
