org.apache.sysml.runtime.matrix.CleanupMR Maven / Gradle / Ivy
Go to download
Show more of this group Show more artifacts with this name
Show all versions of systemml Show documentation
Show all versions of systemml Show documentation
Declarative Machine Learning
/*
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
* regarding copyright ownership. The ASF licenses this file
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing,
* software distributed under the License is distributed on an
* "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
* KIND, either express or implied. See the License for the
* specific language governing permissions and limitations
* under the License.
*/
package org.apache.sysml.runtime.matrix;
import java.io.BufferedWriter;
import java.io.IOException;
import java.io.OutputStreamWriter;
import org.apache.commons.logging.Log;
import org.apache.commons.logging.LogFactory;
import org.apache.hadoop.fs.FileSystem;
import org.apache.hadoop.fs.Path;
import org.apache.hadoop.io.LongWritable;
import org.apache.hadoop.io.Text;
import org.apache.hadoop.io.Writable;
import org.apache.hadoop.mapred.FileInputFormat;
import org.apache.hadoop.mapred.JobClient;
import org.apache.hadoop.mapred.JobConf;
import org.apache.hadoop.mapred.Mapper;
import org.apache.hadoop.mapred.OutputCollector;
import org.apache.hadoop.mapred.Reporter;
import org.apache.hadoop.mapred.RunningJob;
import org.apache.hadoop.mapred.lib.NLineInputFormat;
import org.apache.hadoop.mapred.lib.NullOutputFormat;
import org.apache.sysml.conf.DMLConfig;
import org.apache.sysml.runtime.DMLRuntimeException;
import org.apache.sysml.runtime.controlprogram.parfor.stat.InfrastructureAnalyzer;
import org.apache.sysml.runtime.io.IOUtilFunctions;
import org.apache.sysml.runtime.matrix.mapred.MRConfigurationNames;
import org.apache.sysml.runtime.matrix.mapred.MRJobConfiguration;
import org.apache.sysml.runtime.util.LocalFileUtils;
public class CleanupMR
{
private static final Log LOG = LogFactory.getLog(CleanupMR.class.getName());
private CleanupMR() {
//prevent instantiation via private constructor
}
public static boolean runJob( DMLConfig conf )
throws Exception
{
boolean ret = false;
try
{
JobConf job;
job = new JobConf(CleanupMR.class);
job.setJobName("Cleanup-MR");
//set up SystemML local tmp dir
String dir = conf.getTextValue(DMLConfig.LOCAL_TMP_DIR);
MRJobConfiguration.setSystemMLLocalTmpDir(job, dir);
//set mappers, reducers
int numNodes = InfrastructureAnalyzer.getRemoteParallelNodes();
job.setMapperClass(CleanupMapper.class); //map-only
job.setNumMapTasks(numNodes); //numMappers
job.setNumReduceTasks( 0 );
//set input/output format, input path
String inFileName = conf.getTextValue(DMLConfig.SCRATCH_SPACE)+"/cleanup_tasks";
job.setInputFormat(NLineInputFormat.class);
job.setOutputFormat(NullOutputFormat.class);
Path path = new Path( inFileName );
FileInputFormat.setInputPaths(job, path);
writeCleanupTasksToFile(path, numNodes);
//disable automatic tasks timeouts and speculative task exec
job.setInt(MRConfigurationNames.MR_TASK_TIMEOUT, 0);
job.setMapSpeculativeExecution(false);
/////
// execute the MR job
RunningJob runjob = JobClient.runJob(job);
ret = runjob.isSuccessful();
}
catch(Exception ex)
{
//don't raise an exception, just gracefully an error message.
LOG.error("Failed to run cleanup MR job. ",ex);
}
return ret;
}
private static void writeCleanupTasksToFile(Path path, int numTasks)
throws DMLRuntimeException, IOException
{
FileSystem fs = IOUtilFunctions.getFileSystem(path);
try( BufferedWriter br = new BufferedWriter(new OutputStreamWriter(fs.create(path,true))) ) {
for( int i=1; i<=numTasks; i++ )
br.write( String.valueOf("CLEANUP TASK "+i)+"\n" );
}
catch(Exception ex) {
throw new DMLRuntimeException("Error writing cleanup tasks to taskfile "+path.toString(), ex);
}
}
public static class CleanupMapper implements Mapper
{
private static final Log LOG = LogFactory.getLog(CleanupMapper.class.getName());
//file name local tmp dir
protected String _dir = null;
public CleanupMapper( )
{
}
@Override
public void map(LongWritable key, Text value, OutputCollector out, Reporter reporter)
throws IOException
{
try
{
String task = value.toString();
LOG.info("Running cleanup task: "+task+" ("+_dir+") ... ");
int count = LocalFileUtils.cleanupRcWorkingDirectory(_dir);
LOG.info("Done - deleted "+count+" files.");
}
catch(Exception ex)
{
//throw IO exception to adhere to API specification
throw new IOException("Failed to execute cleanup task.",ex);
}
}
@Override
public void configure(JobConf job)
{
_dir = MRJobConfiguration.getSystemMLLocalTmpDir(job);
}
@Override
public void close()
{
}
}
}