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Welcome to the download page for adam-core-spark2_2.10-org.bdgenomics.adam JAR file. Here, you can conveniently obtain the JAR file, which provides essential functionalities for analyzing and processing genomic data within Apache Spark framework. Downloading this JAR file is the first step towards leveraging the power of adam-core-spark2_2.10-org.bdgenomics.adam in your genomics projects.

Files of the artifact adam-core-spark2_2.10 version 0.23.0 from the group org.bdgenomics.adam.

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Artifact adam-core-spark2_2.10
Group org.bdgenomics.adam
Version 0.23.0
Last update 04. January 2018
Organization not specified
URL Not specified
License not specified
Dependencies amount 21
Dependencies utils-misc-spark2_${scala.version.prefix}, utils-metrics-spark2_${scala.version.prefix}, utils-io-spark2_${scala.version.prefix}, utils-cli-spark2_${scala.version.prefix}, utils-intervalrdd-spark2_${scala.version.prefix}, genomic-loci_${scala.version.prefix}, kryo, bdg-formats, commons-io, hadoop-client, spark-core_${scala.version.prefix}, spark-sql_${scala.version.prefix}, fastutil, avro, parquet-avro, parquet-scala_2.10, hadoop-bam, htsjdk, httpclient, guava, adam-codegen-spark2_${scala.version.prefix},
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Source code of adam-core-spark2_2.10 version 0.23.0

META-INF
META-INF.META-INF.MANIFEST.MF
META-INF.maven.org.bdgenomics.adam.adam-core-spark2_2.10
META-INF.maven.org.bdgenomics.adam.adam-core-spark2_2.10.META-INF.maven.org.bdgenomics.adam.adam-core-spark2_2.10.pom.properties
META-INF.maven.org.bdgenomics.adam.adam-core-spark2_2.10.META-INF.maven.org.bdgenomics.adam.adam-core-spark2_2.10.pom.xml
org.bdgenomics.adam.algorithms.consensus
org.bdgenomics.adam.algorithms.consensus.org.bdgenomics.adam.algorithms.consensus.Consensus.scala
org.bdgenomics.adam.algorithms.consensus.org.bdgenomics.adam.algorithms.consensus.ConsensusGenerator.scala
org.bdgenomics.adam.algorithms.consensus.org.bdgenomics.adam.algorithms.consensus.ConsensusGeneratorFromKnowns.scala
org.bdgenomics.adam.algorithms.consensus.org.bdgenomics.adam.algorithms.consensus.ConsensusGeneratorFromReads.scala
org.bdgenomics.adam.algorithms.consensus.org.bdgenomics.adam.algorithms.consensus.ConsensusGeneratorFromSmithWaterman.scala
org.bdgenomics.adam.algorithms.consensus.org.bdgenomics.adam.algorithms.consensus.NormalizationUtils.scala
org.bdgenomics.adam.algorithms.consensus.org.bdgenomics.adam.algorithms.consensus.UnionConsensusGenerator.scala
org.bdgenomics.adam.algorithms.smithwaterman
org.bdgenomics.adam.algorithms.smithwaterman.org.bdgenomics.adam.algorithms.smithwaterman.SmithWaterman.scala
org.bdgenomics.adam.algorithms.smithwaterman.org.bdgenomics.adam.algorithms.smithwaterman.SmithWatermanConstantGapScoring.scala
org.bdgenomics.adam.algorithms.smithwaterman.org.bdgenomics.adam.algorithms.smithwaterman.SmithWatermanGapScoringFromFn.scala
org.bdgenomics.adam.converters
org.bdgenomics.adam.converters.org.bdgenomics.adam.converters.AlignmentRecordConverter.scala
org.bdgenomics.adam.converters.org.bdgenomics.adam.converters.DefaultHeaderLines.scala
org.bdgenomics.adam.converters.org.bdgenomics.adam.converters.FastaConverter.scala
org.bdgenomics.adam.converters.org.bdgenomics.adam.converters.FastqRecordConverter.scala
org.bdgenomics.adam.converters.org.bdgenomics.adam.converters.FragmentConverter.scala
org.bdgenomics.adam.converters.org.bdgenomics.adam.converters.SAMRecordConverter.scala
org.bdgenomics.adam.converters.org.bdgenomics.adam.converters.TranscriptEffectConverter.scala
org.bdgenomics.adam.converters.org.bdgenomics.adam.converters.VariantContextConverter.scala
org.bdgenomics.adam.instrumentation
org.bdgenomics.adam.instrumentation.org.bdgenomics.adam.instrumentation.Timers.scala
org.bdgenomics.adam.io
org.bdgenomics.adam.io.org.bdgenomics.adam.io.FastqInputFormat
org.bdgenomics.adam.io.org.bdgenomics.adam.io.FastqRecordReader
org.bdgenomics.adam.io.org.bdgenomics.adam.io.InterleavedFastqInputFormat
org.bdgenomics.adam.io.org.bdgenomics.adam.io.ResettableCompressedSplitLineReader
org.bdgenomics.adam.io.org.bdgenomics.adam.io.SingleFastqInputFormat
org.bdgenomics.adam.models
org.bdgenomics.adam.models.org.bdgenomics.adam.models.Alphabet.scala
org.bdgenomics.adam.models.org.bdgenomics.adam.models.Attribute.scala
org.bdgenomics.adam.models.org.bdgenomics.adam.models.Coverage.scala
org.bdgenomics.adam.models.org.bdgenomics.adam.models.IndelTable.scala
org.bdgenomics.adam.models.org.bdgenomics.adam.models.MdTag.scala
org.bdgenomics.adam.models.org.bdgenomics.adam.models.NonoverlappingRegions.scala
org.bdgenomics.adam.models.org.bdgenomics.adam.models.RecordGroupDictionary.scala
org.bdgenomics.adam.models.org.bdgenomics.adam.models.ReferencePosition.scala
org.bdgenomics.adam.models.org.bdgenomics.adam.models.ReferenceRegion.scala
org.bdgenomics.adam.models.org.bdgenomics.adam.models.SAMFileHeaderWritable.scala
org.bdgenomics.adam.models.org.bdgenomics.adam.models.SequenceDictionary.scala
org.bdgenomics.adam.models.org.bdgenomics.adam.models.SnpTable.scala
org.bdgenomics.adam.models.org.bdgenomics.adam.models.VCFHeaderWritable.scala
org.bdgenomics.adam.models.org.bdgenomics.adam.models.VariantContext.scala
org.bdgenomics.adam.projections
org.bdgenomics.adam.projections.org.bdgenomics.adam.projections.Enums.scala
org.bdgenomics.adam.projections.org.bdgenomics.adam.projections.FieldEnumeration.scala
org.bdgenomics.adam.projections.org.bdgenomics.adam.projections.Projection.scala
org.bdgenomics.adam.rdd
org.bdgenomics.adam.rdd.org.bdgenomics.adam.rdd.ADAMContext.scala
org.bdgenomics.adam.rdd.org.bdgenomics.adam.rdd.ADAMParquetInputFormat.scala
org.bdgenomics.adam.rdd.org.bdgenomics.adam.rdd.ADAMRDDFunctions.scala
org.bdgenomics.adam.rdd.org.bdgenomics.adam.rdd.GenomeBins.scala
org.bdgenomics.adam.rdd.org.bdgenomics.adam.rdd.GenomicDatasetConversion.scala
org.bdgenomics.adam.rdd.org.bdgenomics.adam.rdd.GenomicPartitioners.scala
org.bdgenomics.adam.rdd.org.bdgenomics.adam.rdd.GenomicRDD.scala
org.bdgenomics.adam.rdd.org.bdgenomics.adam.rdd.InFormatter.scala
org.bdgenomics.adam.rdd.org.bdgenomics.adam.rdd.OutFormatter.scala
org.bdgenomics.adam.rdd.org.bdgenomics.adam.rdd.ReferencePartitioner.scala
org.bdgenomics.adam.rdd.org.bdgenomics.adam.rdd.RegionJoin.scala
org.bdgenomics.adam.rdd.org.bdgenomics.adam.rdd.SAMHeaderWriter.scala
org.bdgenomics.adam.rdd.org.bdgenomics.adam.rdd.ShuffleRegionJoin.scala
org.bdgenomics.adam.rdd.org.bdgenomics.adam.rdd.TreeRegionJoin.scala
org.bdgenomics.adam.rdd.org.bdgenomics.adam.rdd.VCFHeaderUtils.scala
org.bdgenomics.adam.rdd.contig
org.bdgenomics.adam.rdd.contig.org.bdgenomics.adam.rdd.contig.FlankReferenceFragments.scala
org.bdgenomics.adam.rdd.contig.org.bdgenomics.adam.rdd.contig.NucleotideContigFragmentRDD.scala
org.bdgenomics.adam.rdd.feature
org.bdgenomics.adam.rdd.feature.org.bdgenomics.adam.rdd.feature.BEDInFormatter.scala
org.bdgenomics.adam.rdd.feature.org.bdgenomics.adam.rdd.feature.BEDOutFormatter.scala
org.bdgenomics.adam.rdd.feature.org.bdgenomics.adam.rdd.feature.CoverageRDD.scala
org.bdgenomics.adam.rdd.feature.org.bdgenomics.adam.rdd.feature.FeatureParser.scala
org.bdgenomics.adam.rdd.feature.org.bdgenomics.adam.rdd.feature.FeatureRDD.scala
org.bdgenomics.adam.rdd.feature.org.bdgenomics.adam.rdd.feature.Features.scala
org.bdgenomics.adam.rdd.feature.org.bdgenomics.adam.rdd.feature.GFF3HeaderWriter.scala
org.bdgenomics.adam.rdd.feature.org.bdgenomics.adam.rdd.feature.GFF3InFormatter.scala
org.bdgenomics.adam.rdd.feature.org.bdgenomics.adam.rdd.feature.GFF3OutFormatter.scala
org.bdgenomics.adam.rdd.feature.org.bdgenomics.adam.rdd.feature.GTFInFormatter.scala
org.bdgenomics.adam.rdd.feature.org.bdgenomics.adam.rdd.feature.GTFOutFormatter.scala
org.bdgenomics.adam.rdd.feature.org.bdgenomics.adam.rdd.feature.NarrowPeakInFormatter.scala
org.bdgenomics.adam.rdd.feature.org.bdgenomics.adam.rdd.feature.NarrowPeakOutFormatter.scala
org.bdgenomics.adam.rdd.fragment
org.bdgenomics.adam.rdd.fragment.org.bdgenomics.adam.rdd.fragment.FragmentRDD.scala
org.bdgenomics.adam.rdd.fragment.org.bdgenomics.adam.rdd.fragment.InterleavedFASTQInFormatter.scala
org.bdgenomics.adam.rdd.fragment.org.bdgenomics.adam.rdd.fragment.Tab5InFormatter.scala
org.bdgenomics.adam.rdd.fragment.org.bdgenomics.adam.rdd.fragment.Tab6InFormatter.scala
org.bdgenomics.adam.rdd.read
org.bdgenomics.adam.rdd.read.org.bdgenomics.adam.rdd.read.ADAMBAMOutputFormat.scala
org.bdgenomics.adam.rdd.read.org.bdgenomics.adam.rdd.read.ADAMCRAMOutputFormat.scala
org.bdgenomics.adam.rdd.read.org.bdgenomics.adam.rdd.read.ADAMSAMOutputFormat.scala
org.bdgenomics.adam.rdd.read.org.bdgenomics.adam.rdd.read.AlignmentRecordRDD.scala
org.bdgenomics.adam.rdd.read.org.bdgenomics.adam.rdd.read.AnySAMInFormatter.scala
org.bdgenomics.adam.rdd.read.org.bdgenomics.adam.rdd.read.AnySAMOutFormatter.scala
org.bdgenomics.adam.rdd.read.org.bdgenomics.adam.rdd.read.BAMInFormatter.scala
org.bdgenomics.adam.rdd.read.org.bdgenomics.adam.rdd.read.BinQualities.scala
org.bdgenomics.adam.rdd.read.org.bdgenomics.adam.rdd.read.FASTQInFormatter.scala
org.bdgenomics.adam.rdd.read.org.bdgenomics.adam.rdd.read.FlagStat.scala
org.bdgenomics.adam.rdd.read.org.bdgenomics.adam.rdd.read.MDTagging.scala
org.bdgenomics.adam.rdd.read.org.bdgenomics.adam.rdd.read.MarkDuplicates.scala
org.bdgenomics.adam.rdd.read.org.bdgenomics.adam.rdd.read.ReferencePositionPair.scala
org.bdgenomics.adam.rdd.read.org.bdgenomics.adam.rdd.read.RepairPartitions.scala
org.bdgenomics.adam.rdd.read.org.bdgenomics.adam.rdd.read.SAMInFormatter.scala
org.bdgenomics.adam.rdd.read.org.bdgenomics.adam.rdd.read.SingleReadBucket.scala
org.bdgenomics.adam.rdd.read.realignment
org.bdgenomics.adam.rdd.read.realignment.org.bdgenomics.adam.rdd.read.realignment.IndelRealignmentTarget.scala
org.bdgenomics.adam.rdd.read.realignment.org.bdgenomics.adam.rdd.read.realignment.ModPartitioner.scala
org.bdgenomics.adam.rdd.read.realignment.org.bdgenomics.adam.rdd.read.realignment.RealignIndels.scala
org.bdgenomics.adam.rdd.read.realignment.org.bdgenomics.adam.rdd.read.realignment.RealignmentTargetFinder.scala
org.bdgenomics.adam.rdd.read.recalibration
org.bdgenomics.adam.rdd.read.recalibration.org.bdgenomics.adam.rdd.read.recalibration.Aggregate.scala
org.bdgenomics.adam.rdd.read.recalibration.org.bdgenomics.adam.rdd.read.recalibration.BaseQualityRecalibration.scala
org.bdgenomics.adam.rdd.read.recalibration.org.bdgenomics.adam.rdd.read.recalibration.Covariate.scala
org.bdgenomics.adam.rdd.read.recalibration.org.bdgenomics.adam.rdd.read.recalibration.CovariateKey.scala
org.bdgenomics.adam.rdd.read.recalibration.org.bdgenomics.adam.rdd.read.recalibration.CovariateSpace.scala
org.bdgenomics.adam.rdd.read.recalibration.org.bdgenomics.adam.rdd.read.recalibration.CycleCovariate.scala
org.bdgenomics.adam.rdd.read.recalibration.org.bdgenomics.adam.rdd.read.recalibration.DinucCovariate.scala
org.bdgenomics.adam.rdd.read.recalibration.org.bdgenomics.adam.rdd.read.recalibration.Observation.scala
org.bdgenomics.adam.rdd.read.recalibration.org.bdgenomics.adam.rdd.read.recalibration.ObservationTable.scala
org.bdgenomics.adam.rdd.read.recalibration.org.bdgenomics.adam.rdd.read.recalibration.RecalibrationTable.scala
org.bdgenomics.adam.rdd.read.recalibration.org.bdgenomics.adam.rdd.read.recalibration.Recalibrator.scala
org.bdgenomics.adam.rdd.variant
org.bdgenomics.adam.rdd.variant.org.bdgenomics.adam.rdd.variant.ADAMVCFOutputFormat.scala
org.bdgenomics.adam.rdd.variant.org.bdgenomics.adam.rdd.variant.GenotypeRDD.scala
org.bdgenomics.adam.rdd.variant.org.bdgenomics.adam.rdd.variant.VCFInFormatter.scala
org.bdgenomics.adam.rdd.variant.org.bdgenomics.adam.rdd.variant.VCFOutFormatter.scala
org.bdgenomics.adam.rdd.variant.org.bdgenomics.adam.rdd.variant.VariantContextRDD.scala
org.bdgenomics.adam.rdd.variant.org.bdgenomics.adam.rdd.variant.VariantRDD.scala
org.bdgenomics.adam.rich
org.bdgenomics.adam.rich.org.bdgenomics.adam.rich.RichAlignmentRecord.scala
org.bdgenomics.adam.rich.org.bdgenomics.adam.rich.RichCigar.scala
org.bdgenomics.adam.rich.org.bdgenomics.adam.rich.RichVariant.scala
org.bdgenomics.adam.serialization
org.bdgenomics.adam.serialization.org.bdgenomics.adam.serialization.ADAMKryoRegistrator.scala
org.bdgenomics.adam.sql
org.bdgenomics.adam.sql.org.bdgenomics.adam.sql.Schemas.scala
org.bdgenomics.adam.util
org.bdgenomics.adam.util.org.bdgenomics.adam.util.AttributeUtils.scala
org.bdgenomics.adam.util.org.bdgenomics.adam.util.FileExtensions.scala
org.bdgenomics.adam.util.org.bdgenomics.adam.util.FileMerger.scala
org.bdgenomics.adam.util.org.bdgenomics.adam.util.GenomeFileReader.scala
org.bdgenomics.adam.util.org.bdgenomics.adam.util.IndexedFastaFile.scala
org.bdgenomics.adam.util.org.bdgenomics.adam.util.ManualRegionPartitioner.scala
org.bdgenomics.adam.util.org.bdgenomics.adam.util.ParallelFileMerger.scala
org.bdgenomics.adam.util.org.bdgenomics.adam.util.ParquetFileTraversable.scala
org.bdgenomics.adam.util.org.bdgenomics.adam.util.ParquetLogger.scala
org.bdgenomics.adam.util.org.bdgenomics.adam.util.PhredUtils.scala
org.bdgenomics.adam.util.org.bdgenomics.adam.util.ReferenceContigMap.scala
org.bdgenomics.adam.util.org.bdgenomics.adam.util.ReferenceFile.scala
org.bdgenomics.adam.util.org.bdgenomics.adam.util.SequenceDictionaryReader.scala
org.bdgenomics.adam.util.org.bdgenomics.adam.util.TextRddWriter.scala
org.bdgenomics.adam.util.org.bdgenomics.adam.util.TwoBitFile.scala




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