All Downloads are FREE. Search and download functionalities are using the official Maven repository.
Search JAR files by class name

Download forester JAR 1.039 with all dependencies


Applications and software libraries for evolutionary biology and comparative genomics research

Files of the artifact forester version 1.039 from the group org.biojava.thirdparty.

Artifact forester
Group org.biojava.thirdparty
Version 1.039
Last update 30. September 2021
Tags: libraries software evolutionary comparative applications genomics research biology
Organization not specified
URL Not specified
License not specified
Dependencies amount 2
Dependencies commons-codec, openchart,
There are maybe transitive dependencies!
The newest version!
Show more of this group  Show more artifacts with this name
Show all versions of forester Show documentation

Please rate this JAR file. Is it a good library?

28 downloads

Source code of forester version 1.039

META-INF
META-INF.META-INF.MANIFEST.MF
org.forester.analysis
org.forester.analysis.org.forester.analysis.AncestralTaxonomyInference
org.forester.analysis.org.forester.analysis.AncestralTaxonomyInferenceException
org.forester.analysis.org.forester.analysis.TaxonomyDataManager
org.forester.application
org.forester.application.org.forester.application.annotator
org.forester.application.org.forester.application.check_fasta
org.forester.application.org.forester.application.confadd
org.forester.application.org.forester.application.count_support
org.forester.application.org.forester.application.decorator
org.forester.application.org.forester.application.decoratorX
org.forester.application.org.forester.application.dom_dup
org.forester.application.org.forester.application.fasta_split
org.forester.application.org.forester.application.gene_tree_preprocess
org.forester.application.org.forester.application.goac
org.forester.application.org.forester.application.gsdi
org.forester.application.org.forester.application.mcc
org.forester.application.org.forester.application.meta_ontologizer
org.forester.application.org.forester.application.msa_compactor
org.forester.application.org.forester.application.nj
org.forester.application.org.forester.application.obo_tool
org.forester.application.org.forester.application.pccx
org.forester.application.org.forester.application.pfam2go_extractor
org.forester.application.org.forester.application.pfam_go
org.forester.application.org.forester.application.pfamacc2go
org.forester.application.org.forester.application.pfamacc2pfamid
org.forester.application.org.forester.application.phylostrip
org.forester.application.org.forester.application.phyloxml_converter
org.forester.application.org.forester.application.rio
org.forester.application.org.forester.application.support_statistics
org.forester.application.org.forester.application.support_transfer
org.forester.application.org.forester.application.surfacing
org.forester.application.org.forester.application.table2fasta
org.forester.applications
org.forester.applications.org.forester.applications.aa
org.forester.applications.org.forester.applications.aaa
org.forester.applications.org.forester.applications.appearance_vs_count.class
org.forester.applications.org.forester.applications.core_chars.class
org.forester.applications.org.forester.applications.core_chars
org.forester.applications.org.forester.applications.domainloss_replacement.class
org.forester.applications.org.forester.applications.domainloss_replacement
org.forester.applications.org.forester.applications.genome_counts_for_once_appearing_dcs.class
org.forester.applications.org.forester.applications.genome_counts_for_once_appearing_dcs
org.forester.applications.org.forester.applications.get_distances
org.forester.applications.org.forester.applications.get_genome_counts_per_char.class
org.forester.applications.org.forester.applications.get_genome_counts_per_char
org.forester.applications.org.forester.applications.get_loss_nodes.class
org.forester.applications.org.forester.applications.get_loss_nodes
org.forester.applications.org.forester.applications.get_shared_chars.class
org.forester.applications.org.forester.applications.get_shared_chars
org.forester.applications.org.forester.applications.get_subtree_specific_chars.class
org.forester.applications.org.forester.applications.get_subtree_specific_chars
org.forester.applications.org.forester.applications.inverted_dcs.class
org.forester.applications.org.forester.applications.inverted_dcs
org.forester.applications.org.forester.applications.map_lengths
org.forester.applications.org.forester.applications.phylo2coloredgraphics
org.forester.applications.org.forester.applications.phylo2graphics
org.forester.applications.org.forester.applications.reinv_count.class
org.forester.applications.org.forester.applications.reinv_count
org.forester.applications.org.forester.applications.set_comparator.class
org.forester.applications.org.forester.applications.set_comparator
org.forester.applications.org.forester.applications.shared_chars_in_ext_nodes.class
org.forester.applications.org.forester.applications.shared_chars_in_ext_nodes
org.forester.applications.org.forester.applications.simple_node_processor.class
org.forester.applications.org.forester.applications.simple_node_processor
org.forester.applications.org.forester.applications.subtree_feature_count.class
org.forester.applications.org.forester.applications.subtree_feature_count
org.forester.applications.org.forester.applications.tax_code_cleaner.class
org.forester.applications.org.forester.applications.tax_code_cleaner
org.forester.applications.org.forester.applications.wiki_examples
org.forester.archaeopteryx
org.forester.archaeopteryx.org.forester.archaeopteryx.AptxUtil
org.forester.archaeopteryx.org.forester.archaeopteryx.Archaeopteryx
org.forester.archaeopteryx.org.forester.archaeopteryx.ArchaeopteryxA
org.forester.archaeopteryx.org.forester.archaeopteryx.ArchaeopteryxE
org.forester.archaeopteryx.org.forester.archaeopteryx.ColorSchemeChooser
org.forester.archaeopteryx.org.forester.archaeopteryx.Configuration
org.forester.archaeopteryx.org.forester.archaeopteryx.Constants
org.forester.archaeopteryx.org.forester.archaeopteryx.ControlPanel
org.forester.archaeopteryx.org.forester.archaeopteryx.FontChooser
org.forester.archaeopteryx.org.forester.archaeopteryx.MainFrame
org.forester.archaeopteryx.org.forester.archaeopteryx.MainFrameApplet
org.forester.archaeopteryx.org.forester.archaeopteryx.MainFrameApplication
org.forester.archaeopteryx.org.forester.archaeopteryx.MainPanel
org.forester.archaeopteryx.org.forester.archaeopteryx.MainPanelApplets
org.forester.archaeopteryx.org.forester.archaeopteryx.MouseListener
org.forester.archaeopteryx.org.forester.archaeopteryx.NodeEditPanel
org.forester.archaeopteryx.org.forester.archaeopteryx.NodeFrame
org.forester.archaeopteryx.org.forester.archaeopteryx.NodePanel
org.forester.archaeopteryx.org.forester.archaeopteryx.Options
org.forester.archaeopteryx.org.forester.archaeopteryx.PdfExporter
org.forester.archaeopteryx.org.forester.archaeopteryx.Printer
org.forester.archaeopteryx.org.forester.archaeopteryx.TextFrame
org.forester.archaeopteryx.org.forester.archaeopteryx.TreeColorSet
org.forester.archaeopteryx.org.forester.archaeopteryx.TreeFontSet
org.forester.archaeopteryx.org.forester.archaeopteryx.TreePanel
org.forester.archaeopteryx.org.forester.archaeopteryx.TreePanelUtil
org.forester.archaeopteryx.org.forester.archaeopteryx.UrlTreeReader
org.forester.archaeopteryx.phylogeny.data
org.forester.archaeopteryx.phylogeny.data.org.forester.archaeopteryx.phylogeny.data.RenderableDomainArchitecture
org.forester.archaeopteryx.phylogeny.data.org.forester.archaeopteryx.phylogeny.data.RenderableMsaSequence
org.forester.archaeopteryx.phylogeny.data.org.forester.archaeopteryx.phylogeny.data.RenderablePhylogenyData
org.forester.archaeopteryx.phylogeny.data.org.forester.archaeopteryx.phylogeny.data.RenderableVector
org.forester.archaeopteryx.tools
org.forester.archaeopteryx.tools.org.forester.archaeopteryx.tools.AncestralTaxonomyInferrer
org.forester.archaeopteryx.tools.org.forester.archaeopteryx.tools.Blast
org.forester.archaeopteryx.tools.org.forester.archaeopteryx.tools.ImageLoader
org.forester.archaeopteryx.tools.org.forester.archaeopteryx.tools.InferenceManager
org.forester.archaeopteryx.tools.org.forester.archaeopteryx.tools.PhyloInferenceDialog
org.forester.archaeopteryx.tools.org.forester.archaeopteryx.tools.PhylogeneticInferenceOptions
org.forester.archaeopteryx.tools.org.forester.archaeopteryx.tools.PhylogeneticInferrer
org.forester.archaeopteryx.tools.org.forester.archaeopteryx.tools.ProcessPool
org.forester.archaeopteryx.tools.org.forester.archaeopteryx.tools.ProcessRunning
org.forester.archaeopteryx.tools.org.forester.archaeopteryx.tools.RunnableProcess
org.forester.archaeopteryx.tools.org.forester.archaeopteryx.tools.SequenceDataRetriver
org.forester.archaeopteryx.webservices
org.forester.archaeopteryx.webservices.org.forester.archaeopteryx.webservices.BasicPhylogeniesWebserviceClient
org.forester.archaeopteryx.webservices.org.forester.archaeopteryx.webservices.PhylogeniesWebserviceClient
org.forester.archaeopteryx.webservices.org.forester.archaeopteryx.webservices.WebserviceUtil
org.forester.archaeopteryx.webservices.org.forester.archaeopteryx.webservices.WebservicesManager
org.forester.datastructures
org.forester.datastructures.org.forester.datastructures.IntMatrix
org.forester.datastructures.org.forester.datastructures.Queue
org.forester.development
org.forester.development.org.forester.development.AbstractRenderer
org.forester.development.org.forester.development.DevelopmentTools
org.forester.development.org.forester.development.Hello3d
org.forester.development.org.forester.development.HmmerRest
org.forester.development.org.forester.development.MsaRenderer
org.forester.development.org.forester.development.RandomThing
org.forester.development.org.forester.development.ResidueRenderer
org.forester.development.org.forester.development.Test
org.forester.development.org.forester.development.Time
org.forester.development.org.forester.development.neTest
org.forester.evoinference
org.forester.evoinference.org.forester.evoinference.TestPhylogenyReconstruction
org.forester.evoinference.distance
org.forester.evoinference.distance.org.forester.evoinference.distance.NeighborJoining
org.forester.evoinference.distance.org.forester.evoinference.distance.NeighborJoiningF
org.forester.evoinference.distance.org.forester.evoinference.distance.NeighborJoiningR
org.forester.evoinference.distance.org.forester.evoinference.distance.PairwiseDistanceCalculator
org.forester.evoinference.distance.org.forester.evoinference.distance.Sarray
org.forester.evoinference.distance.org.forester.evoinference.distance.Sset
org.forester.evoinference.matrix.character
org.forester.evoinference.matrix.character.org.forester.evoinference.matrix.character.BasicCharacterStateMatrix
org.forester.evoinference.matrix.character.org.forester.evoinference.matrix.character.CharacterStateMatrix
org.forester.evoinference.matrix.distance
org.forester.evoinference.matrix.distance.org.forester.evoinference.matrix.distance.BasicSymmetricalDistanceMatrix
org.forester.evoinference.matrix.distance.org.forester.evoinference.matrix.distance.DistanceMatrix
org.forester.evoinference.parsimony
org.forester.evoinference.parsimony.org.forester.evoinference.parsimony.DolloParsimony
org.forester.evoinference.parsimony.org.forester.evoinference.parsimony.FitchParsimony
org.forester.evoinference.parsimony.org.forester.evoinference.parsimony.SankoffParsimony
org.forester.evoinference.tools
org.forester.evoinference.tools.org.forester.evoinference.tools.BootstrapResampler
org.forester.go
org.forester.go.org.forester.go.BasicGoRelationship
org.forester.go.org.forester.go.BasicGoSubset
org.forester.go.org.forester.go.BasicGoTerm
org.forester.go.org.forester.go.BasicGoXRef
org.forester.go.org.forester.go.GoId
org.forester.go.org.forester.go.GoNameSpace
org.forester.go.org.forester.go.GoRelationship
org.forester.go.org.forester.go.GoSubset
org.forester.go.org.forester.go.GoTerm
org.forester.go.org.forester.go.GoUtils
org.forester.go.org.forester.go.GoXRef
org.forester.go.org.forester.go.Mapping
org.forester.go.org.forester.go.OBOparser
org.forester.go.org.forester.go.PfamToGoMapping
org.forester.go.org.forester.go.PfamToGoParser
org.forester.go.org.forester.go.TestGo
org.forester.go.etc
org.forester.go.etc.org.forester.go.etc.MetaOntologizer
org.forester.go.etc.org.forester.go.etc.OntologizerResult
org.forester.io.parsers
org.forester.io.parsers.org.forester.io.parsers.FastaParser
org.forester.io.parsers.org.forester.io.parsers.GeneralMsaParser
org.forester.io.parsers.org.forester.io.parsers.HmmPfamOutputParser
org.forester.io.parsers.org.forester.io.parsers.HmmscanPerDomainTableParser
org.forester.io.parsers.org.forester.io.parsers.IteratingPhylogenyParser
org.forester.io.parsers.org.forester.io.parsers.PhylogenyParser
org.forester.io.parsers.org.forester.io.parsers.SymmetricalDistanceMatrixParser
org.forester.io.parsers.nexus
org.forester.io.parsers.nexus.org.forester.io.parsers.nexus.NexusBinaryStatesMatrixParser
org.forester.io.parsers.nexus.org.forester.io.parsers.nexus.NexusCharactersParser
org.forester.io.parsers.nexus.org.forester.io.parsers.nexus.NexusConstants
org.forester.io.parsers.nexus.org.forester.io.parsers.nexus.NexusFormatException
org.forester.io.parsers.nexus.org.forester.io.parsers.nexus.NexusPhylogeniesParser
org.forester.io.parsers.nexus.org.forester.io.parsers.nexus.PaupLogParser
org.forester.io.parsers.nhx
org.forester.io.parsers.nhx.org.forester.io.parsers.nhx.NHXFormatException
org.forester.io.parsers.nhx.org.forester.io.parsers.nhx.NHXParser
org.forester.io.parsers.nhx.org.forester.io.parsers.nhx.NHXtags
org.forester.io.parsers.phyloxml
org.forester.io.parsers.phyloxml.org.forester.io.parsers.phyloxml.PhyloXmlDataFormatException
org.forester.io.parsers.phyloxml.org.forester.io.parsers.phyloxml.PhyloXmlException
org.forester.io.parsers.phyloxml.org.forester.io.parsers.phyloxml.PhyloXmlHandler
org.forester.io.parsers.phyloxml.org.forester.io.parsers.phyloxml.PhyloXmlMapping
org.forester.io.parsers.phyloxml.org.forester.io.parsers.phyloxml.PhyloXmlParser
org.forester.io.parsers.phyloxml.org.forester.io.parsers.phyloxml.PhyloXmlUtil
org.forester.io.parsers.phyloxml.org.forester.io.parsers.phyloxml.XmlElement
org.forester.io.parsers.phyloxml.data
org.forester.io.parsers.phyloxml.data.org.forester.io.parsers.phyloxml.data.AccessionParser
org.forester.io.parsers.phyloxml.data.org.forester.io.parsers.phyloxml.data.AnnotationParser
org.forester.io.parsers.phyloxml.data.org.forester.io.parsers.phyloxml.data.BinaryCharactersParser
org.forester.io.parsers.phyloxml.data.org.forester.io.parsers.phyloxml.data.BranchWidthParser
org.forester.io.parsers.phyloxml.data.org.forester.io.parsers.phyloxml.data.ColorParser
org.forester.io.parsers.phyloxml.data.org.forester.io.parsers.phyloxml.data.ConfidenceParser
org.forester.io.parsers.phyloxml.data.org.forester.io.parsers.phyloxml.data.DateParser
org.forester.io.parsers.phyloxml.data.org.forester.io.parsers.phyloxml.data.DistributionParser
org.forester.io.parsers.phyloxml.data.org.forester.io.parsers.phyloxml.data.DomainArchitectureParser
org.forester.io.parsers.phyloxml.data.org.forester.io.parsers.phyloxml.data.EventParser
org.forester.io.parsers.phyloxml.data.org.forester.io.parsers.phyloxml.data.IdentifierParser
org.forester.io.parsers.phyloxml.data.org.forester.io.parsers.phyloxml.data.PhylogenyDataPhyloXmlParser
org.forester.io.parsers.phyloxml.data.org.forester.io.parsers.phyloxml.data.PointParser
org.forester.io.parsers.phyloxml.data.org.forester.io.parsers.phyloxml.data.PolygonParser
org.forester.io.parsers.phyloxml.data.org.forester.io.parsers.phyloxml.data.PropertyParser
org.forester.io.parsers.phyloxml.data.org.forester.io.parsers.phyloxml.data.ProteinDomainParser
org.forester.io.parsers.phyloxml.data.org.forester.io.parsers.phyloxml.data.ReferenceParser
org.forester.io.parsers.phyloxml.data.org.forester.io.parsers.phyloxml.data.SequenceParser
org.forester.io.parsers.phyloxml.data.org.forester.io.parsers.phyloxml.data.SequenceRelationParser
org.forester.io.parsers.phyloxml.data.org.forester.io.parsers.phyloxml.data.TaxonomyParser
org.forester.io.parsers.phyloxml.data.org.forester.io.parsers.phyloxml.data.UriParser
org.forester.io.parsers.tol
org.forester.io.parsers.tol.org.forester.io.parsers.tol.TolParser
org.forester.io.parsers.tol.org.forester.io.parsers.tol.TolXmlHandler
org.forester.io.parsers.tol.org.forester.io.parsers.tol.TolXmlMapping
org.forester.io.parsers.util
org.forester.io.parsers.util.org.forester.io.parsers.util.ParserUtils
org.forester.io.parsers.util.org.forester.io.parsers.util.PhylogenyParserException
org.forester.io.writers
org.forester.io.writers.org.forester.io.writers.PhyloXmlNodeWriter
org.forester.io.writers.org.forester.io.writers.PhylogenyWriter
org.forester.io.writers.org.forester.io.writers.SequenceWriter
org.forester.msa
org.forester.msa.org.forester.msa.BasicMsa
org.forester.msa.org.forester.msa.ClustalOmega
org.forester.msa.org.forester.msa.DeleteableMsa
org.forester.msa.org.forester.msa.Mafft
org.forester.msa.org.forester.msa.Msa
org.forester.msa.org.forester.msa.MsaFormatException
org.forester.msa.org.forester.msa.MsaInferrer
org.forester.msa.org.forester.msa.MsaMethods
org.forester.msa.org.forester.msa.ResampleableMsa
org.forester.msa_compactor
org.forester.msa_compactor.org.forester.msa_compactor.Chart
org.forester.msa_compactor.org.forester.msa_compactor.GapContribution
org.forester.msa_compactor.org.forester.msa_compactor.MsaCompactor
org.forester.msa_compactor.org.forester.msa_compactor.MsaProperties
org.forester.pccx
org.forester.pccx.org.forester.pccx.BasicExternalNodeBasedCoverageExtender
org.forester.pccx.org.forester.pccx.BranchCountingBasedScoringMethod
org.forester.pccx.org.forester.pccx.BranchLengthBasedScoringMethod
org.forester.pccx.org.forester.pccx.Coverage
org.forester.pccx.org.forester.pccx.CoverageCalculationMethod
org.forester.pccx.org.forester.pccx.CoverageCalculationOptions
org.forester.pccx.org.forester.pccx.CoverageCalculator
org.forester.pccx.org.forester.pccx.CoverageExtender
org.forester.pccx.org.forester.pccx.ExternalNodeBasedCoverage
org.forester.pccx.org.forester.pccx.ExternalNodeBasedCoverageMethod
org.forester.pccx.org.forester.pccx.ExternalNodeBasedCoverageMethodOptions
org.forester.pccx.org.forester.pccx.LogBranchLengthBasedScoringMethod
org.forester.pccx.org.forester.pccx.ModelingUtils
org.forester.pccx.org.forester.pccx.ScoringMethodForExternalNode
org.forester.pccx.org.forester.pccx.TestPccx
org.forester.phylogeny
org.forester.phylogeny.org.forester.phylogeny.Phylogeny
org.forester.phylogeny.org.forester.phylogeny.PhylogenyBranch
org.forester.phylogeny.org.forester.phylogeny.PhylogenyMethods
org.forester.phylogeny.org.forester.phylogeny.PhylogenyNode
org.forester.phylogeny.data
org.forester.phylogeny.data.org.forester.phylogeny.data.Accession
org.forester.phylogeny.data.org.forester.phylogeny.data.Annotation
org.forester.phylogeny.data.org.forester.phylogeny.data.BinaryCharacters
org.forester.phylogeny.data.org.forester.phylogeny.data.BranchColor
org.forester.phylogeny.data.org.forester.phylogeny.data.BranchData
org.forester.phylogeny.data.org.forester.phylogeny.data.BranchWidth
org.forester.phylogeny.data.org.forester.phylogeny.data.Confidence
org.forester.phylogeny.data.org.forester.phylogeny.data.Date
org.forester.phylogeny.data.org.forester.phylogeny.data.Distribution
org.forester.phylogeny.data.org.forester.phylogeny.data.DomainArchitecture
org.forester.phylogeny.data.org.forester.phylogeny.data.Event
org.forester.phylogeny.data.org.forester.phylogeny.data.Identifier
org.forester.phylogeny.data.org.forester.phylogeny.data.MultipleUris
org.forester.phylogeny.data.org.forester.phylogeny.data.NodeData
org.forester.phylogeny.data.org.forester.phylogeny.data.NodeDataField
org.forester.phylogeny.data.org.forester.phylogeny.data.NodeVisualData
org.forester.phylogeny.data.org.forester.phylogeny.data.PhylogenyData
org.forester.phylogeny.data.org.forester.phylogeny.data.PhylogenyDataUtil
org.forester.phylogeny.data.org.forester.phylogeny.data.Point
org.forester.phylogeny.data.org.forester.phylogeny.data.Polygon
org.forester.phylogeny.data.org.forester.phylogeny.data.PropertiesMap
org.forester.phylogeny.data.org.forester.phylogeny.data.Property
org.forester.phylogeny.data.org.forester.phylogeny.data.ProteinDomain
org.forester.phylogeny.data.org.forester.phylogeny.data.Reference
org.forester.phylogeny.data.org.forester.phylogeny.data.Sequence
org.forester.phylogeny.data.org.forester.phylogeny.data.SequenceRelation
org.forester.phylogeny.data.org.forester.phylogeny.data.Taxonomy
org.forester.phylogeny.data.org.forester.phylogeny.data.Uri
org.forester.phylogeny.factories
org.forester.phylogeny.factories.org.forester.phylogeny.factories.ParserBasedPhylogenyFactory
org.forester.phylogeny.factories.org.forester.phylogeny.factories.PhylogenyFactory
org.forester.phylogeny.iterators
org.forester.phylogeny.iterators.org.forester.phylogeny.iterators.ExternalForwardIterator
org.forester.phylogeny.iterators.org.forester.phylogeny.iterators.LevelOrderTreeIterator
org.forester.phylogeny.iterators.org.forester.phylogeny.iterators.PhylogenyNodeIterator
org.forester.phylogeny.iterators.org.forester.phylogeny.iterators.PostOrderStackObject
org.forester.phylogeny.iterators.org.forester.phylogeny.iterators.PostorderTreeIterator
org.forester.phylogeny.iterators.org.forester.phylogeny.iterators.PreorderTreeIterator
org.forester.protein
org.forester.protein.org.forester.protein.BasicDomain
org.forester.protein.org.forester.protein.BasicProtein
org.forester.protein.org.forester.protein.BinaryDomainCombination
org.forester.protein.org.forester.protein.Domain
org.forester.protein.org.forester.protein.Protein
org.forester.protein.org.forester.protein.ProteinId
org.forester.rio
org.forester.rio.org.forester.rio.RIO
org.forester.rio.org.forester.rio.RIOException
org.forester.rio.org.forester.rio.TestRIO
org.forester.sdi
org.forester.sdi.org.forester.sdi.GSDI
org.forester.sdi.org.forester.sdi.GSDII
org.forester.sdi.org.forester.sdi.GSDIR
org.forester.sdi.org.forester.sdi.GSDIsummaryResult
org.forester.sdi.org.forester.sdi.NodesLinkingResult
org.forester.sdi.org.forester.sdi.SDI
org.forester.sdi.org.forester.sdi.SDIException
org.forester.sdi.org.forester.sdi.SDIR
org.forester.sdi.org.forester.sdi.SDIutil
org.forester.sdi.org.forester.sdi.TestGSDI
org.forester.sequence
org.forester.sequence.org.forester.sequence.BasicSequence
org.forester.sequence.org.forester.sequence.MolecularSequence
org.forester.species
org.forester.species.org.forester.species.BasicSpecies
org.forester.species.org.forester.species.Species
org.forester.surfacing
org.forester.surfacing.org.forester.surfacing.AdjactantDirectedBinaryDomainCombination
org.forester.surfacing.org.forester.surfacing.AdjactantDirectedCombinableDomains
org.forester.surfacing.org.forester.surfacing.BasicBinaryDomainCombination
org.forester.surfacing.org.forester.surfacing.BasicCombinableDomains
org.forester.surfacing.org.forester.surfacing.BasicDomainSimilarityCalculator
org.forester.surfacing.org.forester.surfacing.BasicGenomeWideCombinableDomains
org.forester.surfacing.org.forester.surfacing.CombinableDomains
org.forester.surfacing.org.forester.surfacing.CombinationsBasedPairwiseDomainSimilarity
org.forester.surfacing.org.forester.surfacing.CombinationsBasedPairwiseDomainSimilarityCalculator
org.forester.surfacing.org.forester.surfacing.CountsBasedPairwiseDomainSimilarity
org.forester.surfacing.org.forester.surfacing.DirectedBinaryDomainCombination
org.forester.surfacing.org.forester.surfacing.DirectedCombinableDomains
org.forester.surfacing.org.forester.surfacing.DomainArchitectureBasedGenomeSimilarityCalculator
org.forester.surfacing.org.forester.surfacing.DomainCountsBasedPairwiseSimilarityCalculator
org.forester.surfacing.org.forester.surfacing.DomainCountsDifferenceUtil
org.forester.surfacing.org.forester.surfacing.DomainLengths
org.forester.surfacing.org.forester.surfacing.DomainLengthsTable
org.forester.surfacing.org.forester.surfacing.DomainParsimonyCalculator
org.forester.surfacing.org.forester.surfacing.DomainSimilarity
org.forester.surfacing.org.forester.surfacing.DomainSimilarityCalculator
org.forester.surfacing.org.forester.surfacing.GenomeWideCombinableDomains
org.forester.surfacing.org.forester.surfacing.MappingResults
org.forester.surfacing.org.forester.surfacing.PairwiseDomainSimilarity
org.forester.surfacing.org.forester.surfacing.PairwiseDomainSimilarityCalculator
org.forester.surfacing.org.forester.surfacing.PairwiseGenomeComparator
org.forester.surfacing.org.forester.surfacing.PrintableSpeciesSpecificDcData
org.forester.surfacing.org.forester.surfacing.ProteinCountsBasedPairwiseDomainSimilarityCalculator
org.forester.surfacing.org.forester.surfacing.SimpleDomain
org.forester.surfacing.org.forester.surfacing.SpeciesSpecificDcData
org.forester.surfacing.org.forester.surfacing.SurfacingConstants
org.forester.surfacing.org.forester.surfacing.SurfacingUtil
org.forester.surfacing.org.forester.surfacing.TestSurfacing
org.forester.test
org.forester.test.org.forester.test.Test
org.forester.test.examples
org.forester.test.examples.org.forester.test.examples.Example1
org.forester.test.examples.org.forester.test.examples.Example2
org.forester.test.examples.org.forester.test.examples.Example3
org.forester.test.examples.org.forester.test.examples.Example4
org.forester.test.examples.org.forester.test.examples.Example5
org.forester.tools
org.forester.tools.org.forester.tools.ConfidenceAssessor
org.forester.tools.org.forester.tools.PhylogenyDecorator
org.forester.tools.org.forester.tools.SupportCount
org.forester.tools.org.forester.tools.TreeSplitMatrix
org.forester.util
org.forester.util.org.forester.util.AsciiHistogram
org.forester.util.org.forester.util.BasicDescriptiveStatistics
org.forester.util.org.forester.util.BasicTable
org.forester.util.org.forester.util.BasicTableParser
org.forester.util.org.forester.util.CommandLineArguments
org.forester.util.org.forester.util.CommandProcessBuilder
org.forester.util.org.forester.util.DescriptiveStatistics
org.forester.util.org.forester.util.EasyWriter
org.forester.util.org.forester.util.ExternalProgram
org.forester.util.org.forester.util.FailedConditionCheckException
org.forester.util.org.forester.util.ForesterConstants
org.forester.util.org.forester.util.ForesterUtil
org.forester.util.org.forester.util.GeneralTable
org.forester.util.org.forester.util.IllegalFormatUseException
org.forester.util.org.forester.util.SequenceAccessionTools
org.forester.util.org.forester.util.StringInt
org.forester.util.org.forester.util.SystemCommandExecutor
org.forester.util.org.forester.util.TaxonomyColors
org.forester.util.org.forester.util.TaxonomyGroups
org.forester.util.org.forester.util.TaxonomyUtil
org.forester.util.org.forester.util.ThreadedStreamHandler
org.forester.util.org.forester.util.WindowsUtils
org.forester.ws.hmmer
org.forester.ws.hmmer.org.forester.ws.hmmer.Test
org.forester.ws.seqdb
org.forester.ws.seqdb.org.forester.ws.seqdb.EbiDbEntry
org.forester.ws.seqdb.org.forester.ws.seqdb.SequenceDatabaseEntry
org.forester.ws.seqdb.org.forester.ws.seqdb.SequenceDbWsTools
org.forester.ws.seqdb.org.forester.ws.seqdb.UniProtEntry
org.forester.ws.seqdb.org.forester.ws.seqdb.UniProtTaxonomy
org.forester.ws.wabi
org.forester.ws.wabi.org.forester.ws.wabi.RestUtil
org.forester.ws.wabi.org.forester.ws.wabi.TxSearch
org.forester.ws.wabi.org.forester.ws.wabi.WabiTools
.phyloxml.xsd
.synth_look_and_feel_1.xml




© 2015 - 2024 Weber Informatics LLC | Privacy Policy